RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
EDEM1-202ENST00000434243 NRXN2Q9P2S2 1712 aa17.51■□□□□ 0.39
EDEM1-202ENST00000434243 SCN7AQ01118 1682 aa17.51■□□□□ 0.39
EDEM1-202ENST00000434243 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
EDEM1-202ENST00000434243 C21orf2O43822 256 aa17.5■□□□□ 0.39
EDEM1-202ENST00000434243 HLFQ16534 295 aa17.5■□□□□ 0.39
EDEM1-202ENST00000434243 TPTE2Q6XPS3 522 aa17.5■□□□□ 0.39
EDEM1-202ENST00000434243 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
EDEM1-202ENST00000434243 KDM2BQ8NHM5 1336 aa17.49■□□□□ 0.39
EDEM1-202ENST00000434243 LMNB1P20700 586 aa17.49■□□□□ 0.39
EDEM1-202ENST00000434243 KIF6Q6ZMV9 814 aa17.49■□□□□ 0.39
EDEM1-202ENST00000434243 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
EDEM1-202ENST00000434243 HSPA6P17066 643 aa17.48■□□□□ 0.39
EDEM1-202ENST00000434243 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
EDEM1-202ENST00000434243 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
EDEM1-202ENST00000434243 MASTLQ96GX5 879 aa17.48■□□□□ 0.39
EDEM1-202ENST00000434243 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
EDEM1-202ENST00000434243 ARFGEF1Q9Y6D6 1849 aa17.48■□□□□ 0.39
EDEM1-202ENST00000434243 TOMM70O94826 608 aa17.47■□□□□ 0.39
EDEM1-202ENST00000434243 SRGNP10124 158 aa17.47■□□□□ 0.39
EDEM1-202ENST00000434243 TTLL7Q6ZT98 887 aa17.47■□□□□ 0.39
EDEM1-202ENST00000434243 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
EDEM1-202ENST00000434243 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
EDEM1-202ENST00000434243 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
EDEM1-202ENST00000434243 ERVV-1B6SEH8 477 aa17.46■□□□□ 0.39
EDEM1-202ENST00000434243 NFKBIEO00221 500 aa17.46■□□□□ 0.39
EDEM1-202ENST00000434243 RGL2O15211 777 aa17.46■□□□□ 0.39
EDEM1-202ENST00000434243 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
EDEM1-202ENST00000434243 ADAMTS8Q9UP79 889 aa17.46■□□□□ 0.39
EDEM1-202ENST00000434243 MAP3K15Q6ZN16 1313 aa17.46■□□□□ 0.38
EDEM1-202ENST00000434243 PRELPP51888 382 aa17.45■□□□□ 0.38
EDEM1-202ENST00000434243 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
EDEM1-202ENST00000434243 NPR1P16066 1061 aa17.44■□□□□ 0.38
EDEM1-202ENST00000434243 GPTP24298 496 aa17.44■□□□□ 0.38
EDEM1-202ENST00000434243 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
EDEM1-202ENST00000434243 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
EDEM1-202ENST00000434243 DLG5Q8TDM6 1919 aa17.44■□□□□ 0.38
EDEM1-202ENST00000434243 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
EDEM1-202ENST00000434243 NUTM1Q86Y26 1132 aa17.43■□□□□ 0.38
EDEM1-202ENST00000434243 NYXQ9GZU5 481 aa17.43■□□□□ 0.38
EDEM1-202ENST00000434243 TAOK3Q9H2K8 898 aa17.43■□□□□ 0.38
EDEM1-202ENST00000434243 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
EDEM1-202ENST00000434243 ZC3H4Q9UPT8 1303 aaKnown RBP17.43■□□□□ 0.38
EDEM1-202ENST00000434243 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
EDEM1-202ENST00000434243 ANXA1P04083 346 aa17.42■□□□□ 0.38
EDEM1-202ENST00000434243 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
EDEM1-202ENST00000434243 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
EDEM1-202ENST00000434243 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
EDEM1-202ENST00000434243 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
EDEM1-202ENST00000434243 RBM46Q8TBY0 533 aaKnown RBP17.41■□□□□ 0.38
EDEM1-202ENST00000434243 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
EDEM1-202ENST00000434243 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
EDEM1-202ENST00000434243 KLRG2A4D1S0 409 aaPredicted RBP17.4■□□□□ 0.38
EDEM1-202ENST00000434243 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
EDEM1-202ENST00000434243 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
EDEM1-202ENST00000434243 LAMB4A4D0S4 1761 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 CHL1O00533 1208 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 ALDH1B1P30837 517 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 PDIA6Q15084 440 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 CCDC93Q567U6 631 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 SUSD4Q5VX71 490 aa17.39■□□□□ 0.37
EDEM1-202ENST00000434243 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
EDEM1-202ENST00000434243 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
EDEM1-202ENST00000434243 APLP1P51693 650 aa17.38■□□□□ 0.37
EDEM1-202ENST00000434243 PPP1R42Q7Z4L9 355 aa17.38■□□□□ 0.37
EDEM1-202ENST00000434243 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
EDEM1-202ENST00000434243 UBN2Q6ZU65 1347 aa17.38■□□□□ 0.37
EDEM1-202ENST00000434243 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
EDEM1-202ENST00000434243 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
EDEM1-202ENST00000434243 COPS6Q7L5N1 327 aa17.37■□□□□ 0.37
EDEM1-202ENST00000434243 XAGE3Q8WTP9 111 aa17.37■□□□□ 0.37
EDEM1-202ENST00000434243 C7orf43Q8WVR3 580 aa17.37■□□□□ 0.37
EDEM1-202ENST00000434243 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
EDEM1-202ENST00000434243 LTBP3Q9NS15 1303 aa17.37■□□□□ 0.37
EDEM1-202ENST00000434243 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
EDEM1-202ENST00000434243 APAF1O14727 1248 aa17.36■□□□□ 0.37
EDEM1-202ENST00000434243 FSTL1Q12841 308 aa17.36■□□□□ 0.37
EDEM1-202ENST00000434243 PARP10Q53GL7 1025 aa17.36■□□□□ 0.37
EDEM1-202ENST00000434243 OLFM4Q6UX06 510 aa17.36■□□□□ 0.37
EDEM1-202ENST00000434243 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
EDEM1-202ENST00000434243 LRP10Q7Z4F1 713 aa17.35■□□□□ 0.37
EDEM1-202ENST00000434243 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
EDEM1-202ENST00000434243 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
EDEM1-202ENST00000434243 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
EDEM1-202ENST00000434243 SBF1O95248 1867 aa17.35■□□□□ 0.37
EDEM1-202ENST00000434243 NTSR2O95665 410 aa17.34■□□□□ 0.37
EDEM1-202ENST00000434243 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.37
EDEM1-202ENST00000434243 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
EDEM1-202ENST00000434243 RBM17Q96I25 401 aaKnown RBP17.34■□□□□ 0.37
EDEM1-202ENST00000434243 CFAP44Q96MT7 982 aa17.34■□□□□ 0.37
EDEM1-202ENST00000434243 DDX21Q9NR30 783 aaKnown RBP eCLIP17.34■□□□□ 0.37
EDEM1-202ENST00000434243 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
EDEM1-202ENST00000434243 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
EDEM1-202ENST00000434243 SLX4Q8IY92 1834 aa17.33■□□□□ 0.37
EDEM1-202ENST00000434243 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
EDEM1-202ENST00000434243 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
EDEM1-202ENST00000434243 HSP90AB3PQ58FF7 597 aa17.33■□□□□ 0.36
EDEM1-202ENST00000434243 NLRP3Q96P20 1036 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms