RNA–Protein interactions for RNA: ENST00000433360.5

PPP1R9A-206, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-206ENST00000433360 CCDC152Q4G0S7 254 aa6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 EHBP1Q8NDI1 1231 aa6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 CRACR2AQ9BSW2 395 aa6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 MSH6P52701 1360 aa6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 SREK1Q8WXA9 508 aaKnown RBP6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 TSNARE1Q96NA8 513 aa6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 DDX19AQ9NUU7 478 aaKnown RBP6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 LRRFIP2Q9Y608 721 aaKnown RBP6.41□□□□□ -1.38
PPP1R9A-206ENST00000433360 MINDY4BA8MYZ0 360 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 GSDMDP57764 484 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 SLFN5Q08AF3 891 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 APBB1IPQ7Z5R6 666 aaPredicted RBP6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 FAM107BQ9H098 131 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 KAT14Q9H8E8 782 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 RAPGEF3O95398 923 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 SKIDA1Q1XH10 827 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 CCDC183Q5T5S1 534 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 HOMER2Q9NSB8 354 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 PLB1Q6P1J6 1458 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 ANKRD36BQ8N2N9 1353 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 MICALCLQ6ZW33 695 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 NYXQ9GZU5 481 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 SSX2IPQ9Y2D8 614 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 ARAP1Q96P48 1450 aa6.4□□□□□ -1.38
PPP1R9A-206ENST00000433360 SHTN1A0MZ66 631 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 IFIT3O14879 490 aaKnown RBP6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 RANBP6O60518 1105 aaKnown RBP6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 TOM1O60784 492 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 PRPHP41219 470 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 FMNL3Q8IVF7 1028 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 KRT23Q9C075 422 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 CNNM2Q9H8M5 875 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 ABCA10Q8WWZ4 1543 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 NBPF7P0C2Y1 421 aaPredicted RBP6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 RFC4P35249 363 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 MAP2K1Q02750 393 aaPredicted RBP6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 SPC24Q8NBT2 197 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 UBXN4Q92575 508 aa6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 NAP1L4Q99733 375 aaKnown RBP6.4□□□□□ -1.39
PPP1R9A-206ENST00000433360 WDR97A6NE52 1622 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 PLCG2P16885 1265 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 LUZP1Q86V48 1076 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 STK11IPQ8N1F8 1099 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 UTP14AQ9BVJ6 771 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 NKTRP30414 1462 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 C6orf229H3BNL8 230 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 TBCAO75347 108 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 SNRPA1P09661 255 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 TOP1P11387 765 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 FERP16591 822 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 CTNNA2P26232 953 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 ACTN2P35609 894 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 CCDC174Q6PII3 467 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 DYDC1Q8WWB3 177 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 CDCA7LQ96GN5 454 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 LIMCH1Q9UPQ0 1083 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 AMOTL2Q9Y2J4 779 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 SCAF11Q99590 1463 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 GSTTP1A0A1W2PQM5 241 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 MAP4K4O95819 1239 aaPredicted RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 PAXIP1Q6ZW49 1069 aaPredicted RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 KRT28Q7Z3Y7 464 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 FILIP1Q7Z7B0 1213 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 DHX37Q8IY37 1157 aaKnown RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 IL1RAPL2Q9NP60 686 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 MAP3K1Q13233 1512 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 CASQ1P31415 396 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 VSIG10Q8N0Z9 540 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 CENPHQ9H3R5 247 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 GRPEL1Q9HAV7 217 aa6.39□□□□□ -1.39
PPP1R9A-206ENST00000433360 BIVM-ERCC5R4GMW8 1640 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 NCBP1Q09161 790 aaKnown RBP6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 WDR78Q5VTH9 848 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 TAF3Q5VWG9 929 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 PRPF40BQ6NWY9 871 aaKnown RBP6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 NCOA7Q8NI08 942 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 ECHDC1Q9NTX5 307 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 SOS1Q07889 1333 aaPredicted RBP6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 TMCO3Q6UWJ1 677 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 MFSD6Q6ZSS7 791 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 CNNM3Q8NE01 707 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 TBC1D5Q92609 795 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 UBA5Q9GZZ9 404 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 NPHP3Q7Z494 1330 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 STX6O43752 255 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 PTCD1O75127 700 aaKnown RBP6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 CALM1P0DP23 149 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 CALM2P0DP24 149 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 CALM3P0DP25 149 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 IARSP41252 1262 aaKnown RBP6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 CCDC40Q4G0X9 1142 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 NUTM1Q86Y26 1132 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 TMEM57Q8N5G2 664 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 BACH2Q9BYV9 841 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 TNRQ92752 1358 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 POLD1P28340 1107 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 SPAG1Q07617 926 aa6.38□□□□□ -1.39
PPP1R9A-206ENST00000433360 IFFO1Q0D2I5 559 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms