RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 CDC45O75419 566 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 DDB1Q16531 1140 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 KAZALD1Q96I82 304 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 BICC1Q9H694 974 aaKnown RBP18.71■□□□□ 0.59
SF1-209ENST00000433274 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
SF1-209ENST00000433274 SPATA31A5Q5VU36 1347 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 SPATA31A7Q8IWB4 1347 aa18.71■□□□□ 0.59
SF1-209ENST00000433274 ATP5J2-PTCD1G3V325 749 aa18.71■□□□□ 0.58
SF1-209ENST00000433274 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.58
SF1-209ENST00000433274 BCL9O00512 1426 aa18.7■□□□□ 0.58
SF1-209ENST00000433274 ITGB4P16144 1822 aa18.7■□□□□ 0.58
SF1-209ENST00000433274 DNAJC10Q8IXB1 793 aa18.7■□□□□ 0.58
SF1-209ENST00000433274 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
SF1-209ENST00000433274 SLIT2O94813 1529 aa18.7■□□□□ 0.58
SF1-209ENST00000433274 KAT6BQ8WYB5 2073 aa18.69■□□□□ 0.58
SF1-209ENST00000433274 SDSP20132 328 aa18.69■□□□□ 0.58
SF1-209ENST00000433274 MX1P20591 662 aa18.69■□□□□ 0.58
SF1-209ENST00000433274 RHPN1Q8TCX5 695 aa18.69■□□□□ 0.58
SF1-209ENST00000433274 SALL3Q9BXA9 1300 aa18.69■□□□□ 0.58
SF1-209ENST00000433274 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
SF1-209ENST00000433274 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
SF1-209ENST00000433274 ARFGEF2Q9Y6D5 1785 aa18.69■□□□□ 0.58
SF1-209ENST00000433274 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
SF1-209ENST00000433274 KIF1BPQ96EK5 621 aa18.68■□□□□ 0.58
SF1-209ENST00000433274 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
SF1-209ENST00000433274 LRP6O75581 1613 aa18.68■□□□□ 0.58
SF1-209ENST00000433274 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
SF1-209ENST00000433274 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
SF1-209ENST00000433274 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
SF1-209ENST00000433274 TEX13AQ9BXU3 409 aaPredicted RBP18.68■□□□□ 0.58
SF1-209ENST00000433274 ZBTB3Q9H5J0 574 aa18.68■□□□□ 0.58
SF1-209ENST00000433274 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
SF1-209ENST00000433274 A0A0G2JS52 829 aa18.67■□□□□ 0.58
SF1-209ENST00000433274 ANP32EQ9BTT0 268 aa18.67■□□□□ 0.58
SF1-209ENST00000433274 JCADQ9P266 1359 aa18.67■□□□□ 0.58
SF1-209ENST00000433274 NUTM1Q86Y26 1132 aa18.67■□□□□ 0.58
SF1-209ENST00000433274 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
SF1-209ENST00000433274 A0A087WZG4 1122 aa18.66■□□□□ 0.58
SF1-209ENST00000433274 UBE3BQ7Z3V4 1068 aa18.66■□□□□ 0.58
SF1-209ENST00000433274 NGLY1Q96IV0 654 aa18.66■□□□□ 0.58
SF1-209ENST00000433274 STARD3NLO95772 234 aa18.66■□□□□ 0.58
SF1-209ENST00000433274 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
SF1-209ENST00000433274 EPHA10Q5JZY3 1008 aa18.65■□□□□ 0.58
SF1-209ENST00000433274 BARGINQ6ZT62 677 aa18.65■□□□□ 0.58
SF1-209ENST00000433274 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
SF1-209ENST00000433274 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
SF1-209ENST00000433274 SLC4A9Q96Q91 983 aa18.65■□□□□ 0.58
SF1-209ENST00000433274 STAP2Q9UGK3 403 aa18.65■□□□□ 0.58
SF1-209ENST00000433274 AFDNP55196 1824 aaKnown RBP18.64■□□□□ 0.57
SF1-209ENST00000433274 DOT1LQ8TEK3 1739 aa18.63■□□□□ 0.57
SF1-209ENST00000433274 FAM98CQ17RN3 349 aaKnown RBP18.62■□□□□ 0.57
SF1-209ENST00000433274 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
SF1-209ENST00000433274 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SF1-209ENST00000433274 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
SF1-209ENST00000433274 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
SF1-209ENST00000433274 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
SF1-209ENST00000433274 NUP188Q5SRE5 1749 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 BECN1Q14457 450 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 ERC1Q8IUD2 1116 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 SIL1Q9H173 461 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
SF1-209ENST00000433274 CASP7P55210 303 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.575e-7■□□□□ 9.3
SF1-209ENST00000433274 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
SF1-209ENST00000433274 BCL9LQ86UU0 1499 aa18.61■□□□□ 0.57
SF1-209ENST00000433274 TRIM6-TRIM34B2RNG4 842 aa18.6■□□□□ 0.57
SF1-209ENST00000433274 CLASRPQ8N2M8 674 aaKnown RBP18.6■□□□□ 0.57
SF1-209ENST00000433274 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
SF1-209ENST00000433274 RILPL2Q969X0 211 aa18.6■□□□□ 0.57
SF1-209ENST00000433274 AOX1Q06278 1338 aa18.6■□□□□ 0.57
SF1-209ENST00000433274 H7C1W4 665 aa18.6■□□□□ 0.57
SF1-209ENST00000433274 KIF6Q6ZMV9 814 aa18.6■□□□□ 0.57
SF1-209ENST00000433274 VPS72Q15906 364 aa18.59■□□□□ 0.57
SF1-209ENST00000433274 CCDC191Q8NCU4 936 aa18.59■□□□□ 0.57
SF1-209ENST00000433274 COL15A1P39059 1388 aa18.58■□□□□ 0.57
SF1-209ENST00000433274 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.56
SF1-209ENST00000433274 SASH1O94885 1247 aa18.58■□□□□ 0.56
SF1-209ENST00000433274 RABL6Q3YEC7 729 aaPredicted RBP18.58■□□□□ 0.56
SF1-209ENST00000433274 ZBTB1Q9Y2K1 713 aa18.58■□□□□ 0.56
SF1-209ENST00000433274 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
SF1-209ENST00000433274 PI4K2BQ8TCG2 481 aa18.57■□□□□ 0.56
SF1-209ENST00000433274 SPATA31A6Q5VVP1 1343 aa18.57■□□□□ 0.56
SF1-209ENST00000433274 LMBR1LQ6UX01 489 aa18.57■□□□□ 0.56
SF1-209ENST00000433274 FNBP4Q8N3X1 1017 aaPredicted RBP18.57■□□□□ 0.56
SF1-209ENST00000433274 TBC1D2Q9BYX2 928 aa18.57■□□□□ 0.56
SF1-209ENST00000433274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
SF1-209ENST00000433274 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
SF1-209ENST00000433274 IFIT2P09913 472 aaKnown RBP18.56■□□□□ 0.56
SF1-209ENST00000433274 AACSQ86V21 672 aa18.56■□□□□ 0.56
SF1-209ENST00000433274 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
SF1-209ENST00000433274 ISCA1Q9BUE6 129 aa18.56■□□□□ 0.56
SF1-209ENST00000433274 USP21Q9UK80 565 aa18.56■□□□□ 0.56
SF1-209ENST00000433274 CHMP3Q9Y3E7 222 aa18.56■□□□□ 0.56
SF1-209ENST00000433274 MAP3K15Q6ZN16 1313 aa18.55■□□□□ 0.56
SF1-209ENST00000433274 FOXO4P98177 505 aa18.55■□□□□ 0.56
SF1-209ENST00000433274 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
SF1-209ENST00000433274 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms