RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 PLEKHF1Q96S99 279 aa20.28■□□□□ 0.84
RPL28-204ENST00000431533 TAOK3Q9H2K8 898 aa20.28■□□□□ 0.84
RPL28-204ENST00000431533 PNNQ9H307 717 aaKnown RBP20.28■□□□□ 0.84
RPL28-204ENST00000431533 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
RPL28-204ENST00000431533 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
RPL28-204ENST00000431533 SCN7AQ01118 1682 aa20.27■□□□□ 0.84
RPL28-204ENST00000431533 A1BGP04217 495 aa20.27■□□□□ 0.84
RPL28-204ENST00000431533 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
RPL28-204ENST00000431533 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
RPL28-204ENST00000431533 MASTLQ96GX5 879 aa20.27■□□□□ 0.84
RPL28-204ENST00000431533 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
RPL28-204ENST00000431533 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
RPL28-204ENST00000431533 PRELPP51888 382 aa20.26■□□□□ 0.83
RPL28-204ENST00000431533 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
RPL28-204ENST00000431533 TIAM2Q8IVF5 1701 aa20.26■□□□□ 0.83
RPL28-204ENST00000431533 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
RPL28-204ENST00000431533 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
RPL28-204ENST00000431533 NBPF5PQ86XG9 351 aaPredicted RBP20.25■□□□□ 0.83
RPL28-204ENST00000431533 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
RPL28-204ENST00000431533 RGL2O15211 777 aa20.23■□□□□ 0.83
RPL28-204ENST00000431533 SRGNP10124 158 aa20.23■□□□□ 0.83
RPL28-204ENST00000431533 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPL28-204ENST00000431533 TPTE2Q6XPS3 522 aa20.23■□□□□ 0.83
RPL28-204ENST00000431533 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
RPL28-204ENST00000431533 CCDC24Q8N4L8 307 aa20.23■□□□□ 0.83
RPL28-204ENST00000431533 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
RPL28-204ENST00000431533 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
RPL28-204ENST00000431533 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
RPL28-204ENST00000431533 IQCA1LA6NCM1 817 aa20.22■□□□□ 0.83
RPL28-204ENST00000431533 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
RPL28-204ENST00000431533 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
RPL28-204ENST00000431533 FER1L6Q2WGJ9 1857 aa20.22■□□□□ 0.83
RPL28-204ENST00000431533 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
RPL28-204ENST00000431533 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
RPL28-204ENST00000431533 CHADLQ6NUI6 762 aa20.21■□□□□ 0.83
RPL28-204ENST00000431533 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
RPL28-204ENST00000431533 POTECB2RU33 542 aa20.2■□□□□ 0.82
RPL28-204ENST00000431533 NPR1P16066 1061 aa20.2■□□□□ 0.82
RPL28-204ENST00000431533 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
RPL28-204ENST00000431533 COL13A1Q5TAT6 717 aaPredicted RBP20.2■□□□□ 0.82
RPL28-204ENST00000431533 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
RPL28-204ENST00000431533 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
RPL28-204ENST00000431533 TNS4Q8IZW8 715 aa20.19■□□□□ 0.82
RPL28-204ENST00000431533 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
RPL28-204ENST00000431533 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
RPL28-204ENST00000431533 RIPK4P57078 832 aa20.18■□□□□ 0.82
RPL28-204ENST00000431533 NEUROD2Q15784 382 aa20.18■□□□□ 0.82
RPL28-204ENST00000431533 COL11A2P13942 1736 aaPredicted RBP20.17■□□□□ 0.82
RPL28-204ENST00000431533 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
RPL28-204ENST00000431533 ALDH1B1P30837 517 aa20.17■□□□□ 0.82
RPL28-204ENST00000431533 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
RPL28-204ENST00000431533 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
RPL28-204ENST00000431533 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
RPL28-204ENST00000431533 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPL28-204ENST00000431533 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
RPL28-204ENST00000431533 HSPA1AP0DMV8 641 aaKnown RBP20.16■□□□□ 0.82
RPL28-204ENST00000431533 HSPA1BP0DMV9 641 aaKnown RBP20.16■□□□□ 0.82
RPL28-204ENST00000431533 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
RPL28-204ENST00000431533 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
RPL28-204ENST00000431533 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
RPL28-204ENST00000431533 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
RPL28-204ENST00000431533 ARFGEF2Q9Y6D5 1785 aa20.15■□□□□ 0.82
RPL28-204ENST00000431533 SLX4Q8IY92 1834 aa20.15■□□□□ 0.82
RPL28-204ENST00000431533 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
RPL28-204ENST00000431533 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
RPL28-204ENST00000431533 LDHDQ86WU2 507 aa20.14■□□□□ 0.81
RPL28-204ENST00000431533 L3MBTL3Q96JM7 780 aaPredicted RBP20.14■□□□□ 0.81
RPL28-204ENST00000431533 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
RPL28-204ENST00000431533 NYXQ9GZU5 481 aa20.13■□□□□ 0.81
RPL28-204ENST00000431533 CACNA1SQ13698 1873 aa20.12■□□□□ 0.81
RPL28-204ENST00000431533 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
RPL28-204ENST00000431533 C7orf43Q8WVR3 580 aa20.12■□□□□ 0.81
RPL28-204ENST00000431533 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
RPL28-204ENST00000431533 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
RPL28-204ENST00000431533 SCN4AP35499 1836 aa20.11■□□□□ 0.81
RPL28-204ENST00000431533 FAM177BA6PVY3 158 aa20.1■□□□□ 0.81
RPL28-204ENST00000431533 NBPF26B4DH59 902 aa20.1■□□□□ 0.81
RPL28-204ENST00000431533 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
RPL28-204ENST00000431533 NBPF10Q6P3W6 841 aaKnown RBP20.1■□□□□ 0.81
RPL28-204ENST00000431533 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
RPL28-204ENST00000431533 NBPF15Q8N660 670 aa20.1■□□□□ 0.81
RPL28-204ENST00000431533 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
RPL28-204ENST00000431533 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
RPL28-204ENST00000431533 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
RPL28-204ENST00000431533 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
RPL28-204ENST00000431533 CAPN15O75808 1086 aa20.09■□□□□ 0.81
RPL28-204ENST00000431533 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
RPL28-204ENST00000431533 KIF6Q6ZMV9 814 aa20.09■□□□□ 0.81
RPL28-204ENST00000431533 MKRN1Q9UHC7 482 aaKnown RBP20.09■□□□□ 0.81
RPL28-204ENST00000431533 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
RPL28-204ENST00000431533 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
RPL28-204ENST00000431533 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
RPL28-204ENST00000431533 ANP32CO43423 234 aa20.07■□□□□ 0.8
RPL28-204ENST00000431533 CCDC184Q52MB2 194 aa20.07■□□□□ 0.8
RPL28-204ENST00000431533 EAPPQ56P03 285 aaPredicted RBP20.07■□□□□ 0.8
RPL28-204ENST00000431533 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
RPL28-204ENST00000431533 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
RPL28-204ENST00000431533 PASKQ96RG2 1323 aa20.06■□□□□ 0.8
RPL28-204ENST00000431533 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
RPL28-204ENST00000431533 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms