RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.01
AC055876.3-201ENST00000431496 C16orf71Q8IYS4 520 aaPredicted RBP21.39■■□□□ 1.01
AC055876.3-201ENST00000431496 SRGNP10124 158 aa21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 APLP1P51693 650 aa21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 STYK1Q6J9G0 422 aa21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 CNKSR1Q969H4 720 aa21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 THUMPD2Q9BTF0 503 aaKnown RBP21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
AC055876.3-201ENST00000431496 MAPK8IP3Q9UPT6 1336 aa21.37■■□□□ 1.01
AC055876.3-201ENST00000431496 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
AC055876.3-201ENST00000431496 NIP7Q9Y221 180 aaKnown RBP eCLIP21.37■■□□□ 1.01
AC055876.3-201ENST00000431496 DLG5Q8TDM6 1919 aa21.37■■□□□ 1.01
AC055876.3-201ENST00000431496 GLTPD2A6NH11 291 aa21.36■■□□□ 1.01
AC055876.3-201ENST00000431496 TPTE2Q6XPS3 522 aa21.36■■□□□ 1.01
AC055876.3-201ENST00000431496 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
AC055876.3-201ENST00000431496 HLFQ16534 295 aa21.35■■□□□ 1.01
AC055876.3-201ENST00000431496 KLRG2A4D1S0 409 aaPredicted RBP21.34■■□□□ 1.01
AC055876.3-201ENST00000431496 FSTL1Q12841 308 aa21.34■■□□□ 1.01
AC055876.3-201ENST00000431496 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
AC055876.3-201ENST00000431496 PRPF40BQ6NWY9 871 aaKnown RBP21.34■■□□□ 1.01
AC055876.3-201ENST00000431496 NGEFQ8N5V2 710 aa21.33■■□□□ 1.01
AC055876.3-201ENST00000431496 RRP7AQ9Y3A4 280 aaKnown RBP21.33■■□□□ 1.01
AC055876.3-201ENST00000431496 CCDC88AQ3V6T2 1871 aa21.32■■□□□ 1
AC055876.3-201ENST00000431496 COL11A2P13942 1736 aaPredicted RBP21.32■■□□□ 1
AC055876.3-201ENST00000431496 ERVV-1B6SEH8 477 aa21.32■■□□□ 1
AC055876.3-201ENST00000431496 VEGFAP15692 232 aaPredicted RBP21.32■■□□□ 1
AC055876.3-201ENST00000431496 RIPK4P57078 832 aa21.32■■□□□ 1
AC055876.3-201ENST00000431496 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 FAM177BA6PVY3 158 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 NPR1P16066 1061 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 SOGA3Q5TF21 947 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 DNAJC5GQ8N7S2 189 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 TAOK3Q9H2K8 898 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 SLX4Q8IY92 1834 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
AC055876.3-201ENST00000431496 ERFEQ4G0M1 354 aa21.3■■□□□ 1
AC055876.3-201ENST00000431496 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
AC055876.3-201ENST00000431496 FER1L6Q2WGJ9 1857 aa21.29■■□□□ 1
AC055876.3-201ENST00000431496 MYL6BP14649 208 aa21.29■■□□□ 1
AC055876.3-201ENST00000431496 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
AC055876.3-201ENST00000431496 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
AC055876.3-201ENST00000431496 MAP3K15Q6ZN16 1313 aa21.29■■□□□ 1
AC055876.3-201ENST00000431496 TNRC6CQ9HCJ0 1690 aaKnown RBP21.28■■□□□ 1
AC055876.3-201ENST00000431496 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
AC055876.3-201ENST00000431496 TMPOP42166 694 aaKnown RBP21.28■■□□□ 1
AC055876.3-201ENST00000431496 KIF6Q6ZMV9 814 aa21.28■■□□□ 1
AC055876.3-201ENST00000431496 SMC1BQ8NDV3 1235 aa21.28■■□□□ 1
AC055876.3-201ENST00000431496 BABAM1Q9NWV8 329 aa21.28■■□□□ 1
AC055876.3-201ENST00000431496 POTECB2RU33 542 aa21.27■■□□□ 1
AC055876.3-201ENST00000431496 LAMB4A4D0S4 1761 aa21.27■■□□□ 1
AC055876.3-201ENST00000431496 ERBB4Q15303 1308 aa21.27■□□□□ 0.99
AC055876.3-201ENST00000431496 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■□□□□ 0.99
AC055876.3-201ENST00000431496 NYXQ9GZU5 481 aa21.26■□□□□ 0.99
AC055876.3-201ENST00000431496 ALDH1B1P30837 517 aa21.25■□□□□ 0.99
AC055876.3-201ENST00000431496 LMOD3Q0VAK6 560 aa21.25■□□□□ 0.99
AC055876.3-201ENST00000431496 CCDC93Q567U6 631 aa21.25■□□□□ 0.99
AC055876.3-201ENST00000431496 ZBTB3Q9H5J0 574 aa21.25■□□□□ 0.99
AC055876.3-201ENST00000431496 DICER1Q9UPY3 1922 aaKnown RBP21.24■□□□□ 0.99
AC055876.3-201ENST00000431496 NUTM1Q86Y26 1132 aa21.24■□□□□ 0.99
AC055876.3-201ENST00000431496 GPTP24298 496 aa21.23■□□□□ 0.99
AC055876.3-201ENST00000431496 HTRA3P83110 453 aa21.23■□□□□ 0.99
AC055876.3-201ENST00000431496 PDIA6Q15084 440 aa21.23■□□□□ 0.99
AC055876.3-201ENST00000431496 CRY2Q49AN0 593 aa21.23■□□□□ 0.99
AC055876.3-201ENST00000431496 ZNF34Q8IZ26 560 aa21.23■□□□□ 0.99
AC055876.3-201ENST00000431496 TIAM2Q8IVF5 1701 aa21.23■□□□□ 0.99
AC055876.3-201ENST00000431496 NUP98P52948 1817 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 SUSD4Q5VX71 490 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 OLFM4Q6UX06 510 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 GIGYF2Q6Y7W6 1299 aaKnown RBP21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 LRP10Q7Z4F1 713 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 RTKN2Q8IZC4 609 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 ARFGEF2Q9Y6D5 1785 aa21.22■□□□□ 0.99
AC055876.3-201ENST00000431496 FKBP4Q02790 459 aaKnown RBP eCLIP21.21■□□□□ 0.99
AC055876.3-201ENST00000431496 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
AC055876.3-201ENST00000431496 CACNA1SQ13698 1873 aa21.21■□□□□ 0.99
AC055876.3-201ENST00000431496 UBN2Q6ZU65 1347 aa21.21■□□□□ 0.99
AC055876.3-201ENST00000431496 DDNO94850 711 aaPredicted RBP21.2■□□□□ 0.98
AC055876.3-201ENST00000431496 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
AC055876.3-201ENST00000431496 ABCC12Q96J65 1359 aa21.2■□□□□ 0.98
AC055876.3-201ENST00000431496 WDR90Q96KV7 1748 aa21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 CHL1O00533 1208 aa21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 WDR43Q15061 677 aaKnown RBP eCLIP21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 PROSER3Q2NL68 480 aa21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 KLRG1Q96E93 195 aa21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 ZNF277Q9NRM2 450 aaPredicted RBP21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 IBTKQ9P2D0 1353 aaPredicted RBP21.19■□□□□ 0.98
AC055876.3-201ENST00000431496 HOXA10P31260 410 aaPredicted RBP21.18■□□□□ 0.98
AC055876.3-201ENST00000431496 TRIM35Q9UPQ4 493 aa21.18■□□□□ 0.98
AC055876.3-201ENST00000431496 NTSR2O95665 410 aa21.17■□□□□ 0.98
AC055876.3-201ENST00000431496 ANXA1P04083 346 aa21.17■□□□□ 0.98
AC055876.3-201ENST00000431496 PARP10Q53GL7 1025 aa21.17■□□□□ 0.98
AC055876.3-201ENST00000431496 PPP1R42Q7Z4L9 355 aa21.17■□□□□ 0.98
AC055876.3-201ENST00000431496 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
AC055876.3-201ENST00000431496 RPGRQ92834 1020 aaKnown RBP21.16■□□□□ 0.98
AC055876.3-201ENST00000431496 RIC1Q4ADV7 1423 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms