RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TM4SF1P30408 202 aa32.38■■■□□ 2.77
CPNE1-212ENST00000430570 HLFQ16534 295 aa32.38■■■□□ 2.77
CPNE1-212ENST00000430570 BCORQ6W2J9 1755 aa32.38■■■□□ 2.77
CPNE1-212ENST00000430570 PHAXQ9H814 394 aaKnown RBP32.37■■■□□ 2.77
CPNE1-212ENST00000430570 HYPKQ9NX55 129 aa32.37■■■□□ 2.77
CPNE1-212ENST00000430570 MAP3K15Q6ZN16 1313 aa32.36■■■□□ 2.77
CPNE1-212ENST00000430570 NFIXQ14938 502 aa32.36■■■□□ 2.77
CPNE1-212ENST00000430570 TBC1D9BQ66K14 1250 aa32.36■■■□□ 2.77
CPNE1-212ENST00000430570 ZBTB3Q9H5J0 574 aa32.36■■■□□ 2.77
CPNE1-212ENST00000430570 KIF6Q6ZMV9 814 aa32.35■■■□□ 2.77
CPNE1-212ENST00000430570 CHMP4AQ9BY43 222 aa32.35■■■□□ 2.77
CPNE1-212ENST00000430570 DDR1Q08345 913 aa32.34■■■□□ 2.77
CPNE1-212ENST00000430570 BICDL1Q6ZP65 573 aa32.34■■■□□ 2.77
CPNE1-212ENST00000430570 PPP1R1BQ9UD71 204 aaPredicted RBP32.34■■■□□ 2.77
CPNE1-212ENST00000430570 ERVV-1B6SEH8 477 aa32.33■■■□□ 2.77
CPNE1-212ENST00000430570 CLEC4GQ6UXB4 293 aa32.32■■■□□ 2.76
CPNE1-212ENST00000430570 STK31Q9BXU1 1019 aa32.32■■■□□ 2.76
CPNE1-212ENST00000430570 SLC4A2P04920 1241 aa32.31■■■□□ 2.76
CPNE1-212ENST00000430570 POLRMTO00411 1230 aaKnown RBP32.3■■■□□ 2.76
CPNE1-212ENST00000430570 G2E3Q7L622 706 aa32.3■■■□□ 2.76
CPNE1-212ENST00000430570 PARP3Q9Y6F1 533 aa32.3■■■□□ 2.76
CPNE1-212ENST00000430570 ZNF652Q9Y2D9 606 aa32.29■■■□□ 2.76
CPNE1-212ENST00000430570 RGL2O15211 777 aa32.28■■■□□ 2.76
CPNE1-212ENST00000430570 NUP98P52948 1817 aa32.28■■■□□ 2.76
CPNE1-212ENST00000430570 GIGYF2Q6Y7W6 1299 aaKnown RBP32.27■■■□□ 2.76
CPNE1-212ENST00000430570 ANKRD13DQ6ZTN6 518 aa32.26■■■□□ 2.76
CPNE1-212ENST00000430570 PLBD2Q8NHP8 589 aa32.26■■■□□ 2.75
CPNE1-212ENST00000430570 SETDB2Q96T68 719 aa32.26■■■□□ 2.75
CPNE1-212ENST00000430570 FHDC1Q9C0D6 1143 aaPredicted RBP32.26■■■□□ 2.75
CPNE1-212ENST00000430570 NIP7Q9Y221 180 aaKnown RBP eCLIP32.26■■■□□ 2.75
CPNE1-212ENST00000430570 SERPINB2P05120 415 aa32.25■■■□□ 2.75
CPNE1-212ENST00000430570 KLHL34Q8N239 644 aa32.25■■■□□ 2.75
CPNE1-212ENST00000430570 SRCAPQ6ZRS2 3230 aa32.25■■■□□ 2.75
CPNE1-212ENST00000430570 GPTP24298 496 aa32.23■■■□□ 2.75
CPNE1-212ENST00000430570 ZNF34Q8IZ26 560 aa32.22■■■□□ 2.75
CPNE1-212ENST00000430570 AFDNP55196 1824 aaKnown RBP32.22■■■□□ 2.75
CPNE1-212ENST00000430570 ATP10DQ9P241 1426 aa32.21■■■□□ 2.75
CPNE1-212ENST00000430570 RIC3Q7Z5B4 369 aa32.21■■■□□ 2.75
CPNE1-212ENST00000430570 YTHDC1Q96MU7 727 aaKnown RBP32.21■■■□□ 2.75
CPNE1-212ENST00000430570 CARMIL3Q8ND23 1372 aa32.2■■■□□ 2.75
CPNE1-212ENST00000430570 FLIIQ13045 1269 aa32.2■■■□□ 2.74
CPNE1-212ENST00000430570 MRPL50Q8N5N7 158 aaKnown RBP32.2■■■□□ 2.74
CPNE1-212ENST00000430570 SSH1Q8WYL5 1049 aa32.2■■■□□ 2.74
CPNE1-212ENST00000430570 SYT17Q9BSW7 474 aa32.2■■■□□ 2.74
CPNE1-212ENST00000430570 CACNA1FO60840 1977 aa32.2■■■□□ 2.74
CPNE1-212ENST00000430570 UBN2Q6ZU65 1347 aa32.2■■■□□ 2.74
CPNE1-212ENST00000430570 NRXN2Q9P2S2 1712 aa32.19■■■□□ 2.74
CPNE1-212ENST00000430570 CT47B1P0C2W7 299 aaPredicted RBP32.19■■■□□ 2.74
CPNE1-212ENST00000430570 TCIRG1Q13488 830 aa32.19■■■□□ 2.74
CPNE1-212ENST00000430570 FAM177BA6PVY3 158 aa32.18■■■□□ 2.74
CPNE1-212ENST00000430570 BCL2L13Q9BXK5 485 aa32.18■■■□□ 2.74
CPNE1-212ENST00000430570 PI4KAP2A4QPH2 592 aa32.17■■■□□ 2.74
CPNE1-212ENST00000430570 DDX58O95786 925 aaKnown RBP32.17■■■□□ 2.74
CPNE1-212ENST00000430570 KSR2Q6VAB6 950 aa32.17■■■□□ 2.74
CPNE1-212ENST00000430570 CCDC24Q8N4L8 307 aa32.17■■■□□ 2.74
CPNE1-212ENST00000430570 PI4KAP1Q8N8J0 262 aa32.17■■■□□ 2.74
CPNE1-212ENST00000430570 ZNF428Q96B54 188 aa32.17■■■□□ 2.74
CPNE1-212ENST00000430570 ARFGEF2Q9Y6D5 1785 aa32.16■■■□□ 2.74
CPNE1-212ENST00000430570 HSP90AB3PQ58FF7 597 aa32.16■■■□□ 2.74
CPNE1-212ENST00000430570 MAP3K2Q9Y2U5 619 aa32.16■■■□□ 2.74
CPNE1-212ENST00000430570 CD2APQ9Y5K6 639 aa32.16■■■□□ 2.74
CPNE1-212ENST00000430570 C10orf71Q711Q0 1435 aa32.16■■■□□ 2.74
CPNE1-212ENST00000430570 SUSD4Q5VX71 490 aa32.15■■■□□ 2.74
CPNE1-212ENST00000430570 PRR5LQ6MZQ0 368 aa32.15■■■□□ 2.74
CPNE1-212ENST00000430570 NLGN2Q8NFZ4 835 aa32.15■■■□□ 2.74
CPNE1-212ENST00000430570 ADCY9O60503 1353 aa32.15■■■□□ 2.74
CPNE1-212ENST00000430570 ATP5J2-PTCD1G3V325 749 aa32.14■■■□□ 2.74
CPNE1-212ENST00000430570 FKBP5Q13451 457 aaPredicted RBP32.14■■■□□ 2.74
CPNE1-212ENST00000430570 ALDH1L2Q3SY69 923 aa32.14■■■□□ 2.74
CPNE1-212ENST00000430570 NBPF5PQ86XG9 351 aaPredicted RBP32.14■■■□□ 2.74
CPNE1-212ENST00000430570 ISCA1Q9BUE6 129 aa32.14■■■□□ 2.74
CPNE1-212ENST00000430570 ANKRD36CQ5JPF3 1778 aa32.13■■■□□ 2.73
CPNE1-212ENST00000430570 RARSP54136 660 aaKnown RBP32.12■■■□□ 2.73
CPNE1-212ENST00000430570 NLRP10Q86W26 655 aa32.12■■■□□ 2.73
CPNE1-212ENST00000430570 MYD88Q99836 296 aa32.12■■■□□ 2.73
CPNE1-212ENST00000430570 METTL22Q9BUU2 404 aaPredicted RBP32.12■■■□□ 2.73
CPNE1-212ENST00000430570 KIF13BQ9NQT8 1826 aa32.11■■■□□ 2.73
CPNE1-212ENST00000430570 CNBD1Q8NA66 436 aa32.11■■■□□ 2.73
CPNE1-212ENST00000430570 SMC4Q9NTJ3 1288 aa32.11■■■□□ 2.73
CPNE1-212ENST00000430570 PARP10Q53GL7 1025 aa32.1■■■□□ 2.73
CPNE1-212ENST00000430570 TPTE2Q6XPS3 522 aa32.1■■■□□ 2.73
CPNE1-212ENST00000430570 NUTM1Q86Y26 1132 aa32.09■■■□□ 2.73
CPNE1-212ENST00000430570 F6X3S4 739 aa32.08■■■□□ 2.73
CPNE1-212ENST00000430570 NTSR2O95665 410 aa32.08■■■□□ 2.73
CPNE1-212ENST00000430570 NPHP1O15259 732 aa32.07■■■□□ 2.72
CPNE1-212ENST00000430570 DNAAF4Q8WXU2 420 aa32.07■■■□□ 2.72
CPNE1-212ENST00000430570 TRIM28Q13263 835 aaKnown RBP32.06■■■□□ 2.72
CPNE1-212ENST00000430570 ERFEQ4G0M1 354 aa32.06■■■□□ 2.72
CPNE1-212ENST00000430570 PPP1R42Q7Z4L9 355 aa32.06■■■□□ 2.72
CPNE1-212ENST00000430570 UTP14AQ9BVJ6 771 aaKnown RBP32.06■■■□□ 2.72
CPNE1-212ENST00000430570 NYXQ9GZU5 481 aa32.06■■■□□ 2.72
CPNE1-212ENST00000430570 ST5P78524 1137 aa32.05■■■□□ 2.72
CPNE1-212ENST00000430570 A0A0G2JLW4 131 aa32.04■■■□□ 2.72
CPNE1-212ENST00000430570 IGKV5-2P06315 115 aa32.04■■■□□ 2.72
CPNE1-212ENST00000430570 GTF2E1P29083 439 aaPredicted RBP32.04■■■□□ 2.72
CPNE1-212ENST00000430570 TGFB2P61812 414 aa32.04■■■□□ 2.72
CPNE1-212ENST00000430570 ANKRD31Q8N7Z5 1873 aa32.04■■■□□ 2.72
CPNE1-212ENST00000430570 IBTKQ9P2D0 1353 aaPredicted RBP32.04■■■□□ 2.72
CPNE1-212ENST00000430570 KIAA1551Q9HCM1 1747 aa32.04■■■□□ 2.72
CPNE1-212ENST00000430570 BCAR3O75815 825 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms