RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 COL11A2P13942 1736 aaPredicted RBP23■■□□□ 1.27
NUP50-208ENST00000430547 RGL2O15211 777 aa23■■□□□ 1.27
NUP50-208ENST00000430547 MYL6BP14649 208 aa23■■□□□ 1.27
NUP50-208ENST00000430547 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
NUP50-208ENST00000430547 NBPF5PQ86XG9 351 aaPredicted RBP23■■□□□ 1.27
NUP50-208ENST00000430547 BRIP1Q9BX63 1249 aa23■■□□□ 1.27
NUP50-208ENST00000430547 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
NUP50-208ENST00000430547 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
NUP50-208ENST00000430547 GPBP1L1Q9HC44 474 aaPredicted RBP22.99■■□□□ 1.27
NUP50-208ENST00000430547 NIP7Q9Y221 180 aaKnown RBP eCLIP22.99■■□□□ 1.27
NUP50-208ENST00000430547 ERBB4Q15303 1308 aa22.99■■□□□ 1.27
NUP50-208ENST00000430547 TTLL6Q8N841 843 aa22.98■■□□□ 1.27
NUP50-208ENST00000430547 ZNF526Q8TF50 670 aaPredicted RBP22.98■■□□□ 1.27
NUP50-208ENST00000430547 TRIM35Q9UPQ4 493 aa22.98■■□□□ 1.27
NUP50-208ENST00000430547 EIF2S2P20042 333 aaKnown RBP22.97■■□□□ 1.27
NUP50-208ENST00000430547 SBF1O95248 1867 aa22.96■■□□□ 1.27
NUP50-208ENST00000430547 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
NUP50-208ENST00000430547 ERVV-1B6SEH8 477 aa22.95■■□□□ 1.26
NUP50-208ENST00000430547 ANP32CO43423 234 aa22.95■■□□□ 1.26
NUP50-208ENST00000430547 HLFQ16534 295 aa22.95■■□□□ 1.26
NUP50-208ENST00000430547 MAP3K15Q6ZN16 1313 aa22.95■■□□□ 1.26
NUP50-208ENST00000430547 CHL1O00533 1208 aa22.94■■□□□ 1.26
NUP50-208ENST00000430547 TPTE2Q6XPS3 522 aa22.94■■□□□ 1.26
NUP50-208ENST00000430547 ARFGEF2Q9Y6D5 1785 aa22.94■■□□□ 1.26
NUP50-208ENST00000430547 FAM177BA6PVY3 158 aa22.93■■□□□ 1.26
NUP50-208ENST00000430547 APAF1O14727 1248 aa22.93■■□□□ 1.26
NUP50-208ENST00000430547 GTF2E1P29083 439 aaPredicted RBP22.93■■□□□ 1.26
NUP50-208ENST00000430547 CCDC88AQ3V6T2 1871 aa22.93■■□□□ 1.26
NUP50-208ENST00000430547 C1QTNF8P60827 252 aa22.92■■□□□ 1.26
NUP50-208ENST00000430547 C9orf131Q5VYM1 1079 aa22.92■■□□□ 1.26
NUP50-208ENST00000430547 TTLL7Q6ZT98 887 aa22.92■■□□□ 1.26
NUP50-208ENST00000430547 ZBTB3Q9H5J0 574 aa22.92■■□□□ 1.26
NUP50-208ENST00000430547 CALD1Q05682 793 aaKnown RBP22.91■■□□□ 1.26
NUP50-208ENST00000430547 NECTIN2Q92692 538 aa22.91■■□□□ 1.26
NUP50-208ENST00000430547 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
NUP50-208ENST00000430547 CNKSR1Q969H4 720 aa22.9■■□□□ 1.26
NUP50-208ENST00000430547 CFAP44Q96MT7 982 aa22.9■■□□□ 1.26
NUP50-208ENST00000430547 NYXQ9GZU5 481 aa22.9■■□□□ 1.26
NUP50-208ENST00000430547 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.26
NUP50-208ENST00000430547 STYK1Q6J9G0 422 aa22.89■■□□□ 1.25
NUP50-208ENST00000430547 MASTLQ96GX5 879 aa22.89■■□□□ 1.25
NUP50-208ENST00000430547 SLX4Q8IY92 1834 aa22.88■■□□□ 1.25
NUP50-208ENST00000430547 SRGNP10124 158 aa22.88■■□□□ 1.25
NUP50-208ENST00000430547 RASSF7Q02833 373 aa22.88■■□□□ 1.25
NUP50-208ENST00000430547 MRS2Q9HD23 443 aa22.88■■□□□ 1.25
NUP50-208ENST00000430547 ZNF219Q9P2Y4 722 aaPredicted RBP22.88■■□□□ 1.25
NUP50-208ENST00000430547 ANXA1P04083 346 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 GPTP24298 496 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 PDIA6Q15084 440 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 KRT24Q2M2I5 525 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 CCDC184Q52MB2 194 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 GIGYF2Q6Y7W6 1299 aaKnown RBP22.87■■□□□ 1.25
NUP50-208ENST00000430547 TIAM2Q8IVF5 1701 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 FER1L6Q2WGJ9 1857 aa22.87■■□□□ 1.25
NUP50-208ENST00000430547 C21orf2O43822 256 aa22.86■■□□□ 1.25
NUP50-208ENST00000430547 HOXB7P09629 217 aa22.86■■□□□ 1.25
NUP50-208ENST00000430547 GNAI1P63096 354 aa22.86■■□□□ 1.25
NUP50-208ENST00000430547 PROSER3Q2NL68 480 aa22.86■■□□□ 1.25
NUP50-208ENST00000430547 HDGFL1Q5TGJ6 251 aa22.86■■□□□ 1.25
NUP50-208ENST00000430547 TNRC6CQ9HCJ0 1690 aaKnown RBP22.85■■□□□ 1.25
NUP50-208ENST00000430547 NPR1P16066 1061 aa22.85■■□□□ 1.25
NUP50-208ENST00000430547 LMNB1P20700 586 aa22.85■■□□□ 1.25
NUP50-208ENST00000430547 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
NUP50-208ENST00000430547 MBIPQ9NS73 344 aa22.85■■□□□ 1.25
NUP50-208ENST00000430547 IFT57Q9NWB7 429 aa22.85■■□□□ 1.25
NUP50-208ENST00000430547 IBTKQ9P2D0 1353 aaPredicted RBP22.85■■□□□ 1.25
NUP50-208ENST00000430547 AIMP1Q12904 312 aaKnown RBP22.84■■□□□ 1.25
NUP50-208ENST00000430547 PRPF40BQ6NWY9 871 aaKnown RBP22.84■■□□□ 1.25
NUP50-208ENST00000430547 LRP10Q7Z4F1 713 aa22.84■■□□□ 1.25
NUP50-208ENST00000430547 DICER1Q9UPY3 1922 aaKnown RBP22.83■■□□□ 1.25
NUP50-208ENST00000430547 SOGA3Q5TF21 947 aa22.83■■□□□ 1.25
NUP50-208ENST00000430547 COPS6Q7L5N1 327 aa22.83■■□□□ 1.25
NUP50-208ENST00000430547 PPP1R42Q7Z4L9 355 aa22.83■■□□□ 1.25
NUP50-208ENST00000430547 NUTM1Q86Y26 1132 aa22.83■■□□□ 1.25
NUP50-208ENST00000430547 XAGE3Q8WTP9 111 aa22.83■■□□□ 1.25
NUP50-208ENST00000430547 UBN2Q6ZU65 1347 aa22.82■■□□□ 1.24
NUP50-208ENST00000430547 PARP10Q53GL7 1025 aa22.82■■□□□ 1.24
NUP50-208ENST00000430547 DUSP27Q5VZP5 1158 aa22.82■■□□□ 1.24
NUP50-208ENST00000430547 ZNF34Q8IZ26 560 aa22.82■■□□□ 1.24
NUP50-208ENST00000430547 CHPF2Q9P2E5 772 aa22.82■■□□□ 1.24
NUP50-208ENST00000430547 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
NUP50-208ENST00000430547 ZC3H4Q9UPT8 1303 aaKnown RBP22.82■■□□□ 1.24
NUP50-208ENST00000430547 ABCC12Q96J65 1359 aa22.81■■□□□ 1.24
NUP50-208ENST00000430547 SENP3-EIF4A1A0A087X0R7 540 aa22.81■■□□□ 1.24
NUP50-208ENST00000430547 KLRG2A4D1S0 409 aaPredicted RBP22.81■■□□□ 1.24
NUP50-208ENST00000430547 NFKBIEO00221 500 aa22.81■■□□□ 1.24
NUP50-208ENST00000430547 ZNF853P0CG23 659 aa22.81■■□□□ 1.24
NUP50-208ENST00000430547 ERFEQ4G0M1 354 aa22.81■■□□□ 1.24
NUP50-208ENST00000430547 HSP90AB3PQ58FF7 597 aa22.81■■□□□ 1.24
NUP50-208ENST00000430547 DBF4Q9UBU7 674 aaPredicted RBP22.81■■□□□ 1.24
NUP50-208ENST00000430547 SUSD4Q5VX71 490 aa22.8■■□□□ 1.24
NUP50-208ENST00000430547 ALDH1B1P30837 517 aa22.79■■□□□ 1.24
NUP50-208ENST00000430547 TAOK3Q9H2K8 898 aa22.79■■□□□ 1.24
NUP50-208ENST00000430547 RIC1Q4ADV7 1423 aa22.79■■□□□ 1.24
NUP50-208ENST00000430547 RPGRQ92834 1020 aaKnown RBP22.78■■□□□ 1.24
NUP50-208ENST00000430547 KIF3CO14782 793 aa22.77■■□□□ 1.24
NUP50-208ENST00000430547 NTSR2O95665 410 aa22.77■■□□□ 1.24
NUP50-208ENST00000430547 CCDC93Q567U6 631 aa22.77■■□□□ 1.24
NUP50-208ENST00000430547 UTP14AQ9BVJ6 771 aaKnown RBP22.77■■□□□ 1.24
NUP50-208ENST00000430547 NMRK2Q9NPI5 230 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms