RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 EXOC6BQ9Y2D4 811 aa23.48■■□□□ 1.35
HDAC10-204ENST00000429374 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
HDAC10-204ENST00000429374 STARD3NLO95772 234 aa23.47■■□□□ 1.35
HDAC10-204ENST00000429374 FNBP4Q8N3X1 1017 aaPredicted RBP23.47■■□□□ 1.35
HDAC10-204ENST00000429374 MYD88Q99836 296 aa23.47■■□□□ 1.35
HDAC10-204ENST00000429374 SALL3Q9BXA9 1300 aa23.47■■□□□ 1.35
HDAC10-204ENST00000429374 DOT1LQ8TEK3 1739 aa23.46■■□□□ 1.35
HDAC10-204ENST00000429374 VPS72Q15906 364 aa23.46■■□□□ 1.35
HDAC10-204ENST00000429374 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
HDAC10-204ENST00000429374 TBC1D32Q96NH3 1257 aa23.46■■□□□ 1.35
HDAC10-204ENST00000429374 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.46■■□□□ 1.35
HDAC10-204ENST00000429374 SMARCA5O60264 1052 aaPredicted RBP23.45■■□□□ 1.34
HDAC10-204ENST00000429374 KIF1BPQ96EK5 621 aa23.45■■□□□ 1.34
HDAC10-204ENST00000429374 AOX1Q06278 1338 aa23.45■■□□□ 1.34
HDAC10-204ENST00000429374 A1BGP04217 495 aa23.44■■□□□ 1.34
HDAC10-204ENST00000429374 STAP2Q9UGK3 403 aa23.44■■□□□ 1.34
HDAC10-204ENST00000429374 BCL9LQ86UU0 1499 aa23.44■■□□□ 1.34
HDAC10-204ENST00000429374 SURF6O75683 361 aaKnown RBP23.44■■□□□ 1.34
HDAC10-204ENST00000429374 PDE1AP54750 535 aa23.44■■□□□ 1.34
HDAC10-204ENST00000429374 CDC45O75419 566 aa23.43■■□□□ 1.34
HDAC10-204ENST00000429374 GSPT1P15170 499 aaKnown RBP23.43■■□□□ 1.34
HDAC10-204ENST00000429374 CICQ96RK0 1608 aaPredicted RBP23.42■■□□□ 1.34
HDAC10-204ENST00000429374 ERC1Q8IUD2 1116 aa23.42■■□□□ 1.34
HDAC10-204ENST00000429374 KAZALD1Q96I82 304 aa23.42■■□□□ 1.34
HDAC10-204ENST00000429374 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
HDAC10-204ENST00000429374 NGLY1Q96IV0 654 aa23.41■■□□□ 1.34
HDAC10-204ENST00000429374 APBB1O00213 710 aa23.41■■□□□ 1.34
HDAC10-204ENST00000429374 PIP4K2AP48426 406 aaPredicted RBP23.41■■□□□ 1.34
HDAC10-204ENST00000429374 RHPN1Q8TCX5 695 aa23.41■■□□□ 1.34
HDAC10-204ENST00000429374 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
HDAC10-204ENST00000429374 DNAJC10Q8IXB1 793 aa23.4■■□□□ 1.34
HDAC10-204ENST00000429374 MARCH10Q8NA82 808 aaPredicted RBP23.4■■□□□ 1.34
HDAC10-204ENST00000429374 CCDC191Q8NCU4 936 aa23.4■■□□□ 1.34
HDAC10-204ENST00000429374 OTUD7AQ8TE49 926 aaPredicted RBP23.4■■□□□ 1.34
HDAC10-204ENST00000429374 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
HDAC10-204ENST00000429374 TUBGCP6Q96RT7 1819 aa23.4■■□□□ 1.34
HDAC10-204ENST00000429374 MX1P20591 662 aa23.39■■□□□ 1.33
HDAC10-204ENST00000429374 TRIM28Q13263 835 aaKnown RBP23.39■■□□□ 1.33
HDAC10-204ENST00000429374 TTLL7Q6ZT98 887 aa23.39■■□□□ 1.33
HDAC10-204ENST00000429374 RBM42Q9BTD8 480 aaKnown RBP23.39■■□□□ 1.33
HDAC10-204ENST00000429374 BICC1Q9H694 974 aaKnown RBP23.39■■□□□ 1.33
HDAC10-204ENST00000429374 H7C1W4 665 aa23.38■■□□□ 1.33
HDAC10-204ENST00000429374 RABL6Q3YEC7 729 aaPredicted RBP23.38■■□□□ 1.33
HDAC10-204ENST00000429374 TBC1D9Q6ZT07 1266 aa23.38■■□□□ 1.33
HDAC10-204ENST00000429374 TJP1Q07157 1748 aa23.38■■□□□ 1.33
HDAC10-204ENST00000429374 CYP19A1P11511 503 aaPredicted RBP23.37■■□□□ 1.33
HDAC10-204ENST00000429374 CASP7P55210 303 aa23.37■■□□□ 1.33
HDAC10-204ENST00000429374 C22orf23Q9BZE7 217 aa23.37■■□□□ 1.33
HDAC10-204ENST00000429374 KAT6BQ8WYB5 2073 aa23.37■■□□□ 1.33
HDAC10-204ENST00000429374 ZNF831Q5JPB2 1677 aa23.37■■□□□ 1.33
HDAC10-204ENST00000429374 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
HDAC10-204ENST00000429374 CWC25Q9NXE8 425 aaPredicted RBP23.37■■□□□ 1.33
HDAC10-204ENST00000429374 A0A087WZG4 1122 aa23.36■■□□□ 1.33
HDAC10-204ENST00000429374 SDSP20132 328 aa23.36■■□□□ 1.33
HDAC10-204ENST00000429374 RBM25P49756 843 aaKnown RBP23.36■■□□□ 1.33
HDAC10-204ENST00000429374 CASC1Q6TDU7 716 aa23.36■■□□□ 1.33
HDAC10-204ENST00000429374 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
HDAC10-204ENST00000429374 USP42Q9H9J4 1324 aaKnown RBP23.35■■□□□ 1.33
HDAC10-204ENST00000429374 MFAP1P55081 439 aaKnown RBP23.35■■□□□ 1.33
HDAC10-204ENST00000429374 SLC4A9Q96Q91 983 aa23.35■■□□□ 1.33
HDAC10-204ENST00000429374 ISCA1Q9BUE6 129 aa23.35■■□□□ 1.33
HDAC10-204ENST00000429374 TCIRG1Q13488 830 aa23.34■■□□□ 1.33
HDAC10-204ENST00000429374 KIF6Q6ZMV9 814 aa23.34■■□□□ 1.33
HDAC10-204ENST00000429374 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
HDAC10-204ENST00000429374 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
HDAC10-204ENST00000429374 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
HDAC10-204ENST00000429374 ATP5J2-PTCD1G3V325 749 aa23.33■■□□□ 1.32
HDAC10-204ENST00000429374 IL6STP40189 918 aaPredicted RBP23.33■■□□□ 1.32
HDAC10-204ENST00000429374 CLASRPQ8N2M8 674 aaKnown RBP23.33■■□□□ 1.32
HDAC10-204ENST00000429374 RREB1Q92766 1687 aa23.32■■□□□ 1.32
HDAC10-204ENST00000429374 TTC41PQ6P2S7 1318 aa23.32■■□□□ 1.32
HDAC10-204ENST00000429374 G3BP1Q13283 466 aaKnown RBP eCLIP23.32■■□□□ 1.32
HDAC10-204ENST00000429374 OS9Q13438 667 aaPredicted RBP23.32■■□□□ 1.32
HDAC10-204ENST00000429374 HSP90AB3PQ58FF7 597 aa23.32■■□□□ 1.32
HDAC10-204ENST00000429374 UBE3BQ7Z3V4 1068 aa23.32■■□□□ 1.32
HDAC10-204ENST00000429374 DAXXQ9UER7 740 aaPredicted RBP23.32■■□□□ 1.32
HDAC10-204ENST00000429374 MAP3K15Q6ZN16 1313 aa23.31■■□□□ 1.32
HDAC10-204ENST00000429374 BECN1Q14457 450 aa23.31■■□□□ 1.32
HDAC10-204ENST00000429374 USP21Q9UK80 565 aa23.31■■□□□ 1.32
HDAC10-204ENST00000429374 THSD7AQ9UPZ6 1657 aa23.31■■□□□ 1.32
HDAC10-204ENST00000429374 ERVV-1B6SEH8 477 aa23.3■■□□□ 1.32
HDAC10-204ENST00000429374 GIGYF2Q6Y7W6 1299 aaKnown RBP23.3■■□□□ 1.32
HDAC10-204ENST00000429374 ZBTB3Q9H5J0 574 aa23.3■■□□□ 1.32
HDAC10-204ENST00000429374 IL1RAPL2Q9NP60 686 aa23.3■■□□□ 1.32
HDAC10-204ENST00000429374 FAM98CQ17RN3 349 aaKnown RBP23.3■■□□□ 1.32
HDAC10-204ENST00000429374 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
HDAC10-204ENST00000429374 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
HDAC10-204ENST00000429374 RFX5P48382 616 aaPredicted RBP23.29■■□□□ 1.32
HDAC10-204ENST00000429374 FOXO4P98177 505 aa23.27■■□□□ 1.32
HDAC10-204ENST00000429374 PA2G4Q9UQ80 394 aaKnown RBP23.27■■□□□ 1.32
HDAC10-204ENST00000429374 LOC102724428A0A0B4J2F2 783 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 ERC2O15083 957 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 SASH1O94885 1247 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 SIK1P57059 783 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 GPATCH3Q96I76 525 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 PLA2G12BQ9BX93 195 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 PCCAP05165 728 aaPredicted RBP23.26■■□□□ 1.31
HDAC10-204ENST00000429374 PTPN12Q05209 780 aaKnown RBP23.26■■□□□ 1.31
HDAC10-204ENST00000429374 PI4K2BQ8TCG2 481 aa23.26■■□□□ 1.31
HDAC10-204ENST00000429374 ZBTB1Q9Y2K1 713 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms