RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 TIMM10P62072 90 aa13.41□□□□□ -0.26
HIPK2-203ENST00000428878 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
HIPK2-203ENST00000428878 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
HIPK2-203ENST00000428878 MTMR7Q9Y216 660 aa13.41□□□□□ -0.26
HIPK2-203ENST00000428878 SDSP20132 328 aa13.41□□□□□ -0.26
HIPK2-203ENST00000428878 NEK4P51957 841 aa13.41□□□□□ -0.26
HIPK2-203ENST00000428878 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
HIPK2-203ENST00000428878 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
HIPK2-203ENST00000428878 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
HIPK2-203ENST00000428878 XRN1Q8IZH2 1706 aaKnown RBP13.41□□□□□ -0.26
HIPK2-203ENST00000428878 HSP90B1P14625 803 aaKnown RBP13.4□□□□□ -0.26
HIPK2-203ENST00000428878 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
HIPK2-203ENST00000428878 METTL24Q5JXM2 366 aa13.4□□□□□ -0.26
HIPK2-203ENST00000428878 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
HIPK2-203ENST00000428878 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
HIPK2-203ENST00000428878 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
HIPK2-203ENST00000428878 LINS1Q8NG48 757 aa13.4□□□□□ -0.26
HIPK2-203ENST00000428878 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
HIPK2-203ENST00000428878 GNPATO15228 680 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 CEP126Q9P2H0 1117 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 LDHAL6AQ6ZMR3 332 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 G3V3G9 751 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 ATP8B2P98198 1209 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 MST1RQ04912 1400 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 ZPR1O75312 459 aa13.39□□□□□ -0.27
HIPK2-203ENST00000428878 HSP90AB4PQ58FF6 505 aa13.38□□□□□ -0.27
HIPK2-203ENST00000428878 SMC5Q8IY18 1101 aa13.38□□□□□ -0.27
HIPK2-203ENST00000428878 ABCF2Q9UG63 623 aa13.38□□□□□ -0.27
HIPK2-203ENST00000428878 SOS1Q07889 1333 aaPredicted RBP13.38□□□□□ -0.27
HIPK2-203ENST00000428878 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
HIPK2-203ENST00000428878 PDE1AP54750 535 aa13.38□□□□□ -0.27
HIPK2-203ENST00000428878 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
HIPK2-203ENST00000428878 DCTPP1Q9H773 170 aa13.38□□□□□ -0.27
HIPK2-203ENST00000428878 ABCC4O15439 1325 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 SNAP23O00161 211 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 ERC2O15083 957 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
HIPK2-203ENST00000428878 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
HIPK2-203ENST00000428878 CHAF1AQ13111 956 aaPredicted RBP13.37□□□□□ -0.27
HIPK2-203ENST00000428878 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
HIPK2-203ENST00000428878 REC8O95072 547 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 TFCP2Q12800 502 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 STK3Q13188 491 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 AAMPQ13685 434 aa13.37□□□□□ -0.27
HIPK2-203ENST00000428878 GOLIM4O00461 696 aa13.36□□□□□ -0.27
HIPK2-203ENST00000428878 TRIM37O94972 964 aa13.36□□□□□ -0.27
HIPK2-203ENST00000428878 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
HIPK2-203ENST00000428878 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
HIPK2-203ENST00000428878 TTC39AQ5SRH9 613 aa13.36□□□□□ -0.27
HIPK2-203ENST00000428878 RGPD8O14715 1765 aaPredicted RBP13.36□□□□□ -0.27
HIPK2-203ENST00000428878 GCKRQ14397 625 aa13.35□□□□□ -0.27
HIPK2-203ENST00000428878 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
HIPK2-203ENST00000428878 TAF5LO75529 589 aa13.35□□□□□ -0.27
HIPK2-203ENST00000428878 AK7Q96M32 723 aa13.35□□□□□ -0.27
HIPK2-203ENST00000428878 CCNL1Q9UK58 526 aaPredicted RBP13.35□□□□□ -0.27
HIPK2-203ENST00000428878 ITSN1Q15811 1721 aa13.35□□□□□ -0.27
HIPK2-203ENST00000428878 NEURL1BA8MQ27 555 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 METTL22Q9BUU2 404 aaPredicted RBP13.34□□□□□ -0.27
HIPK2-203ENST00000428878 CPA1P15085 419 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 RFC4P35249 363 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 HLFQ16534 295 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 CHD2O14647 1828 aaKnown RBP13.34□□□□□ -0.27
HIPK2-203ENST00000428878 TTC22Q5TAA0 569 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
HIPK2-203ENST00000428878 SOS2Q07890 1332 aaPredicted RBP13.34□□□□□ -0.27
HIPK2-203ENST00000428878 RAD21O60216 631 aa13.33□□□□□ -0.27
HIPK2-203ENST00000428878 PUS3Q9BZE2 481 aaKnown RBP13.33□□□□□ -0.27
HIPK2-203ENST00000428878 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.28
HIPK2-203ENST00000428878 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 IRS4O14654 1257 aaPredicted RBP13.33□□□□□ -0.28
HIPK2-203ENST00000428878 SIK1P57059 783 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 RRP12Q5JTH9 1297 aaKnown RBP13.33□□□□□ -0.28
HIPK2-203ENST00000428878 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
HIPK2-203ENST00000428878 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 ST18O60284 1047 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 UNC5CLQ8IV45 518 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
HIPK2-203ENST00000428878 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 CRB1P82279 1406 aa13.33□□□□□ -0.28
HIPK2-203ENST00000428878 TLR7Q9NYK1 1049 aaKnown RBP13.32□□□□□ -0.28
HIPK2-203ENST00000428878 PXDNQ92626 1479 aa13.32□□□□□ -0.28
HIPK2-203ENST00000428878 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
HIPK2-203ENST00000428878 NBPF5PQ86XG9 351 aaPredicted RBP13.32□□□□□ -0.28
HIPK2-203ENST00000428878 DBNDD2Q9BQY9 259 aa13.32□□□□□ -0.28
HIPK2-203ENST00000428878 HAND2P61296 217 aa13.32□□□□□ -0.28
HIPK2-203ENST00000428878 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
HIPK2-203ENST00000428878 LRRC24Q50LG9 513 aa13.32□□□□□ -0.28
HIPK2-203ENST00000428878 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
HIPK2-203ENST00000428878 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
HIPK2-203ENST00000428878 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms