RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
PHF1-205ENST00000428274 KIF3CO14782 793 aa17.16■□□□□ 0.34
PHF1-205ENST00000428274 ANP32CO43423 234 aa17.16■□□□□ 0.34
PHF1-205ENST00000428274 PDIA6Q15084 440 aa17.16■□□□□ 0.34
PHF1-205ENST00000428274 DALRD3Q5D0E6 543 aaKnown RBP17.16■□□□□ 0.34
PHF1-205ENST00000428274 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
PHF1-205ENST00000428274 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
PHF1-205ENST00000428274 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
PHF1-205ENST00000428274 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
PHF1-205ENST00000428274 HLFQ16534 295 aa17.15■□□□□ 0.34
PHF1-205ENST00000428274 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
PHF1-205ENST00000428274 MYL6BP14649 208 aa17.14■□□□□ 0.33
PHF1-205ENST00000428274 PRELPP51888 382 aa17.14■□□□□ 0.33
PHF1-205ENST00000428274 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
PHF1-205ENST00000428274 TTLL7Q6ZT98 887 aa17.14■□□□□ 0.33
PHF1-205ENST00000428274 CNBD1Q8NA66 436 aa17.14■□□□□ 0.33
PHF1-205ENST00000428274 H0YIN7 160 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 EIF2S2P20042 333 aaKnown RBP17.13■□□□□ 0.33
PHF1-205ENST00000428274 PDE6BP35913 854 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 NGEFQ8N5V2 710 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
PHF1-205ENST00000428274 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
PHF1-205ENST00000428274 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
PHF1-205ENST00000428274 SBF1O95248 1867 aa17.12■□□□□ 0.33
PHF1-205ENST00000428274 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
PHF1-205ENST00000428274 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
PHF1-205ENST00000428274 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
PHF1-205ENST00000428274 HOXB7P09629 217 aa17.11■□□□□ 0.33
PHF1-205ENST00000428274 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
PHF1-205ENST00000428274 TTLL6Q8N841 843 aa17.11■□□□□ 0.33
PHF1-205ENST00000428274 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
PHF1-205ENST00000428274 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
PHF1-205ENST00000428274 ST5P78524 1137 aa17.1■□□□□ 0.33
PHF1-205ENST00000428274 RASSF7Q02833 373 aa17.1■□□□□ 0.33
PHF1-205ENST00000428274 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
PHF1-205ENST00000428274 TPTE2Q6XPS3 522 aa17.1■□□□□ 0.33
PHF1-205ENST00000428274 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
PHF1-205ENST00000428274 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
PHF1-205ENST00000428274 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
PHF1-205ENST00000428274 ANXA1P04083 346 aa17.09■□□□□ 0.33
PHF1-205ENST00000428274 GNAI1P63096 354 aa17.09■□□□□ 0.33
PHF1-205ENST00000428274 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
PHF1-205ENST00000428274 GIGYF2Q6Y7W6 1299 aaKnown RBP17.09■□□□□ 0.33
PHF1-205ENST00000428274 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
PHF1-205ENST00000428274 SRGNP10124 158 aa17.08■□□□□ 0.32
PHF1-205ENST00000428274 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
PHF1-205ENST00000428274 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.32
PHF1-205ENST00000428274 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
PHF1-205ENST00000428274 DDX21Q9NR30 783 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHF1-205ENST00000428274 RNF181Q9P0P0 153 aa17.08■□□□□ 0.32
PHF1-205ENST00000428274 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
PHF1-205ENST00000428274 NPHP1O15259 732 aa17.07■□□□□ 0.32
PHF1-205ENST00000428274 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
PHF1-205ENST00000428274 CCDC88AQ3V6T2 1871 aa17.06■□□□□ 0.32
PHF1-205ENST00000428274 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
PHF1-205ENST00000428274 HDGFL1Q5TGJ6 251 aa17.06■□□□□ 0.32
PHF1-205ENST00000428274 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
PHF1-205ENST00000428274 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
PHF1-205ENST00000428274 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.321e-7■□□□□ 9.3
PHF1-205ENST00000428274 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
PHF1-205ENST00000428274 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
PHF1-205ENST00000428274 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 NFKBIEO00221 500 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 MASTLQ96GX5 879 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
PHF1-205ENST00000428274 FER1L6Q2WGJ9 1857 aa17.05■□□□□ 0.32
PHF1-205ENST00000428274 GPTP24298 496 aa17.04■□□□□ 0.32
PHF1-205ENST00000428274 CNKSR1Q969H4 720 aa17.04■□□□□ 0.32
PHF1-205ENST00000428274 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
PHF1-205ENST00000428274 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
PHF1-205ENST00000428274 NPR1P16066 1061 aa17.03■□□□□ 0.32
PHF1-205ENST00000428274 HSPA6P17066 643 aa17.03■□□□□ 0.32
PHF1-205ENST00000428274 SUSD4Q5VX71 490 aa17.03■□□□□ 0.32
PHF1-205ENST00000428274 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.32
PHF1-205ENST00000428274 C21orf2O43822 256 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 NTSR2O95665 410 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 GTF2E1P29083 439 aaPredicted RBP17.02■□□□□ 0.32
PHF1-205ENST00000428274 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
PHF1-205ENST00000428274 CRY2Q49AN0 593 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 PARP10Q53GL7 1025 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
PHF1-205ENST00000428274 NUTM1Q86Y26 1132 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
PHF1-205ENST00000428274 RIC1Q4ADV7 1423 aa17.02■□□□□ 0.31
PHF1-205ENST00000428274 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
PHF1-205ENST00000428274 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
PHF1-205ENST00000428274 IL16Q14005 1332 aa17■□□□□ 0.31
PHF1-205ENST00000428274 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
PHF1-205ENST00000428274 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms