RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 PNMA8AQ86V59 439 aaPredicted RBP16.52■□□□□ 0.24
DDX39B-208ENST00000428098 CNKSR1Q969H4 720 aa16.52■□□□□ 0.24
DDX39B-208ENST00000428098 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.24
DDX39B-208ENST00000428098 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
DDX39B-208ENST00000428098 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
DDX39B-208ENST00000428098 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
DDX39B-208ENST00000428098 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
DDX39B-208ENST00000428098 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
DDX39B-208ENST00000428098 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
DDX39B-208ENST00000428098 ECE1P42892 770 aa16.49■□□□□ 0.23
DDX39B-208ENST00000428098 DGKZQ13574 1117 aa16.49■□□□□ 0.23
DDX39B-208ENST00000428098 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
DDX39B-208ENST00000428098 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
DDX39B-208ENST00000428098 TRAF5O00463 557 aa16.48■□□□□ 0.23
DDX39B-208ENST00000428098 MAP2K2P36507 400 aa16.48■□□□□ 0.23
DDX39B-208ENST00000428098 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
DDX39B-208ENST00000428098 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
DDX39B-208ENST00000428098 FZD9O00144 591 aa16.47■□□□□ 0.23
DDX39B-208ENST00000428098 MASTLQ96GX5 879 aa16.47■□□□□ 0.23
DDX39B-208ENST00000428098 LTBP1Q14766 1721 aa16.47■□□□□ 0.23
DDX39B-208ENST00000428098 CACNA1SQ13698 1873 aa16.46■□□□□ 0.23
DDX39B-208ENST00000428098 FKBP4Q02790 459 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDX39B-208ENST00000428098 TLL2Q9Y6L7 1015 aa16.46■□□□□ 0.23
DDX39B-208ENST00000428098 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
DDX39B-208ENST00000428098 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
DDX39B-208ENST00000428098 SOX10P56693 466 aa16.44■□□□□ 0.22
DDX39B-208ENST00000428098 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
DDX39B-208ENST00000428098 GPC2Q8N158 579 aa16.44■□□□□ 0.22
DDX39B-208ENST00000428098 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 A0A087WZG4 1122 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
DDX39B-208ENST00000428098 EPS15P42566 896 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 AKAP4Q5JQC9 854 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 SETDB2Q96T68 719 aa16.43■□□□□ 0.22
DDX39B-208ENST00000428098 CA12O43570 354 aa16.42■□□□□ 0.22
DDX39B-208ENST00000428098 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
DDX39B-208ENST00000428098 PRPF38BQ5VTL8 546 aaKnown RBP16.42■□□□□ 0.22
DDX39B-208ENST00000428098 ZIC5Q96T25 663 aa16.42■□□□□ 0.22
DDX39B-208ENST00000428098 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
DDX39B-208ENST00000428098 SAPCD2Q86UD0 394 aa16.41■□□□□ 0.22
DDX39B-208ENST00000428098 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
DDX39B-208ENST00000428098 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
DDX39B-208ENST00000428098 STARD3NLO95772 234 aa16.4■□□□□ 0.22
DDX39B-208ENST00000428098 CIAPIN1Q6FI81 312 aa16.4■□□□□ 0.22
DDX39B-208ENST00000428098 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
DDX39B-208ENST00000428098 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
DDX39B-208ENST00000428098 NPR1P16066 1061 aa16.39■□□□□ 0.21
DDX39B-208ENST00000428098 SCNN1DP51172 638 aa16.39■□□□□ 0.21
DDX39B-208ENST00000428098 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
DDX39B-208ENST00000428098 ST5P78524 1137 aa16.39■□□□□ 0.21
DDX39B-208ENST00000428098 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
DDX39B-208ENST00000428098 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
DDX39B-208ENST00000428098 COL4A5P29400 1685 aa16.38■□□□□ 0.21
DDX39B-208ENST00000428098 NPHP1O15259 732 aa16.38■□□□□ 0.21
DDX39B-208ENST00000428098 A1BGP04217 495 aa16.38■□□□□ 0.21
DDX39B-208ENST00000428098 ZNF496Q96IT1 587 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-208ENST00000428098 TRPM7Q96QT4 1865 aa16.37■□□□□ 0.21
DDX39B-208ENST00000428098 CELF2O95319 508 aaKnown RBP16.36■□□□□ 0.21
DDX39B-208ENST00000428098 IL13P35225 146 aa16.36■□□□□ 0.21
DDX39B-208ENST00000428098 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
DDX39B-208ENST00000428098 USP50Q70EL3 339 aaPredicted RBP16.36■□□□□ 0.21
DDX39B-208ENST00000428098 MRC1P22897 1456 aa16.35■□□□□ 0.21
DDX39B-208ENST00000428098 LMOD1P29536 600 aaPredicted RBP16.35■□□□□ 0.21
DDX39B-208ENST00000428098 JDP2Q8WYK2 163 aa16.35■□□□□ 0.21
DDX39B-208ENST00000428098 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
DDX39B-208ENST00000428098 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
DDX39B-208ENST00000428098 HHIPL1Q96JK4 782 aa16.34■□□□□ 0.21
DDX39B-208ENST00000428098 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
DDX39B-208ENST00000428098 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
DDX39B-208ENST00000428098 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
DDX39B-208ENST00000428098 PSMD1Q99460 953 aa16.33■□□□□ 0.2
DDX39B-208ENST00000428098 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
DDX39B-208ENST00000428098 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
DDX39B-208ENST00000428098 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
DDX39B-208ENST00000428098 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
DDX39B-208ENST00000428098 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
DDX39B-208ENST00000428098 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
DDX39B-208ENST00000428098 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
DDX39B-208ENST00000428098 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
DDX39B-208ENST00000428098 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
DDX39B-208ENST00000428098 HMOX1P09601 288 aa16.29■□□□□ 0.2
DDX39B-208ENST00000428098 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
DDX39B-208ENST00000428098 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
DDX39B-208ENST00000428098 DLK2Q6UY11 383 aa16.29■□□□□ 0.2
DDX39B-208ENST00000428098 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
DDX39B-208ENST00000428098 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
DDX39B-208ENST00000428098 NOGQ13253 232 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 ZNF408Q9H9D4 720 aa16.28■□□□□ 0.2
DDX39B-208ENST00000428098 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
DDX39B-208ENST00000428098 FAM155AB1AL88 458 aaPredicted RBP16.27■□□□□ 0.2
DDX39B-208ENST00000428098 KCNQ3O43525 872 aa16.27■□□□□ 0.2
DDX39B-208ENST00000428098 USP16Q9Y5T5 823 aa16.27■□□□□ 0.2
DDX39B-208ENST00000428098 TRPA1O75762 1119 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms