RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 BCS1LQ9Y276 419 aa19.4■□□□□ 0.7
RTN4-210ENST00000427710 ARFGEF1Q9Y6D6 1849 aa19.39■□□□□ 0.7
RTN4-210ENST00000427710 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
RTN4-210ENST00000427710 ZNF853P0CG23 659 aa19.39■□□□□ 0.69
RTN4-210ENST00000427710 PDIA6Q15084 440 aa19.39■□□□□ 0.69
RTN4-210ENST00000427710 SETDB2Q96T68 719 aa19.39■□□□□ 0.69
RTN4-210ENST00000427710 FAM177BA6PVY3 158 aa19.38■□□□□ 0.69
RTN4-210ENST00000427710 DLEC1Q9Y238 1755 aa19.38■□□□□ 0.69
RTN4-210ENST00000427710 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
RTN4-210ENST00000427710 PRR5LQ6MZQ0 368 aa19.37■□□□□ 0.69
RTN4-210ENST00000427710 ZBTB3Q9H5J0 574 aa19.37■□□□□ 0.69
RTN4-210ENST00000427710 MAP3K15Q6ZN16 1313 aa19.36■□□□□ 0.69
RTN4-210ENST00000427710 KIF6Q6ZMV9 814 aa19.36■□□□□ 0.69
RTN4-210ENST00000427710 LRP10Q7Z4F1 713 aa19.36■□□□□ 0.69
RTN4-210ENST00000427710 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
RTN4-210ENST00000427710 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
RTN4-210ENST00000427710 ZNF652Q9Y2D9 606 aa19.36■□□□□ 0.69
RTN4-210ENST00000427710 ERBB4Q15303 1308 aa19.35■□□□□ 0.69
RTN4-210ENST00000427710 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
RTN4-210ENST00000427710 NPHP1O15259 732 aa19.35■□□□□ 0.69
RTN4-210ENST00000427710 GNAI1P63096 354 aa19.35■□□□□ 0.69
RTN4-210ENST00000427710 AIMP1Q12904 312 aaKnown RBP19.35■□□□□ 0.69
RTN4-210ENST00000427710 DUSP27Q5VZP5 1158 aa19.35■□□□□ 0.69
RTN4-210ENST00000427710 CLEC4GQ6UXB4 293 aa19.35■□□□□ 0.69
RTN4-210ENST00000427710 PIM2Q9P1W9 311 aa19.35■□□□□ 0.69
RTN4-210ENST00000427710 C2CD5Q86YS7 1000 aa19.34■□□□□ 0.69
RTN4-210ENST00000427710 WWC1Q8IX03 1113 aa19.34■□□□□ 0.69
RTN4-210ENST00000427710 CNBD1Q8NA66 436 aa19.34■□□□□ 0.69
RTN4-210ENST00000427710 CHPF2Q9P2E5 772 aa19.34■□□□□ 0.69
RTN4-210ENST00000427710 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.69
RTN4-210ENST00000427710 GPTP24298 496 aa19.33■□□□□ 0.68
RTN4-210ENST00000427710 CALD1Q05682 793 aaKnown RBP19.33■□□□□ 0.68
RTN4-210ENST00000427710 HDGFL1Q5TGJ6 251 aa19.33■□□□□ 0.68
RTN4-210ENST00000427710 NBPF5PQ86XG9 351 aaPredicted RBP19.33■□□□□ 0.68
RTN4-210ENST00000427710 TSR2Q969E8 191 aaKnown RBP19.33■□□□□ 0.68
RTN4-210ENST00000427710 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
RTN4-210ENST00000427710 DALRD3Q5D0E6 543 aaKnown RBP19.32■□□□□ 0.68
RTN4-210ENST00000427710 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
RTN4-210ENST00000427710 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
RTN4-210ENST00000427710 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
RTN4-210ENST00000427710 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
RTN4-210ENST00000427710 ARHGAP27Q6ZUM4 889 aa19.31■□□□□ 0.68
RTN4-210ENST00000427710 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
RTN4-210ENST00000427710 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.688e-6■■□□□ 14
RTN4-210ENST00000427710 SBF1O95248 1867 aa19.31■□□□□ 0.68
RTN4-210ENST00000427710 SLX4Q8IY92 1834 aa19.3■□□□□ 0.68
RTN4-210ENST00000427710 H0YIN7 160 aa19.3■□□□□ 0.68
RTN4-210ENST00000427710 ST5P78524 1137 aa19.3■□□□□ 0.68
RTN4-210ENST00000427710 ZNF622Q969S3 477 aaKnown RBP eCLIP19.3■□□□□ 0.682e-35■□□□□ 10.6
RTN4-210ENST00000427710 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
RTN4-210ENST00000427710 UBN2Q6ZU65 1347 aa19.29■□□□□ 0.68
RTN4-210ENST00000427710 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
RTN4-210ENST00000427710 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
RTN4-210ENST00000427710 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
RTN4-210ENST00000427710 TNRC6CQ9HCJ0 1690 aaKnown RBP19.28■□□□□ 0.68
RTN4-210ENST00000427710 HOXB7P09629 217 aa19.28■□□□□ 0.68
RTN4-210ENST00000427710 PDE6BP35913 854 aa19.28■□□□□ 0.68
RTN4-210ENST00000427710 GIGYF2Q6Y7W6 1299 aaKnown RBP19.28■□□□□ 0.68
RTN4-210ENST00000427710 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
RTN4-210ENST00000427710 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
RTN4-210ENST00000427710 ATP10DQ9P241 1426 aa19.27■□□□□ 0.68
RTN4-210ENST00000427710 RGL2O15211 777 aa19.27■□□□□ 0.68
RTN4-210ENST00000427710 SUSD4Q5VX71 490 aa19.27■□□□□ 0.68
RTN4-210ENST00000427710 TPTE2Q6XPS3 522 aa19.27■□□□□ 0.68
RTN4-210ENST00000427710 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.67
RTN4-210ENST00000427710 TCERG1O14776 1098 aaKnown RBP19.26■□□□□ 0.67
RTN4-210ENST00000427710 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
RTN4-210ENST00000427710 ERFEQ4G0M1 354 aa19.26■□□□□ 0.67
RTN4-210ENST00000427710 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
RTN4-210ENST00000427710 TTLL6Q8N841 843 aa19.26■□□□□ 0.67
RTN4-210ENST00000427710 ABCC12Q96J65 1359 aa19.26■□□□□ 0.67
RTN4-210ENST00000427710 DBF4Q9UBU7 674 aaPredicted RBP19.25■□□□□ 0.67
RTN4-210ENST00000427710 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
RTN4-210ENST00000427710 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
RTN4-210ENST00000427710 IL16Q14005 1332 aa19.24■□□□□ 0.67
RTN4-210ENST00000427710 SRGNP10124 158 aa19.23■□□□□ 0.67
RTN4-210ENST00000427710 RASSF7Q02833 373 aa19.23■□□□□ 0.67
RTN4-210ENST00000427710 LAMB2P55268 1798 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 NTSR2O95665 410 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
RTN4-210ENST00000427710 WDR63Q8IWG1 891 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 NYXQ9GZU5 481 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 CACNA1FO60840 1977 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 FER1L6Q2WGJ9 1857 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
RTN4-210ENST00000427710 TAF1P21675 1872 aa19.21■□□□□ 0.67
RTN4-210ENST00000427710 TCIRG1Q13488 830 aa19.21■□□□□ 0.67
RTN4-210ENST00000427710 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
RTN4-210ENST00000427710 MASTLQ96GX5 879 aa19.21■□□□□ 0.67
RTN4-210ENST00000427710 PDZRN3Q9UPQ7 1066 aa19.21■□□□□ 0.67
RTN4-210ENST00000427710 C21orf2O43822 256 aa19.2■□□□□ 0.66
RTN4-210ENST00000427710 TWISTNBQ3B726 338 aaPredicted RBP19.2■□□□□ 0.66
RTN4-210ENST00000427710 STYK1Q6J9G0 422 aa19.2■□□□□ 0.66
RTN4-210ENST00000427710 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
RTN4-210ENST00000427710 SYNE4Q8N205 404 aa19.2■□□□□ 0.66
RTN4-210ENST00000427710 PLBD2Q8NHP8 589 aa19.2■□□□□ 0.66
RTN4-210ENST00000427710 ADCY9O60503 1353 aa19.19■□□□□ 0.66
RTN4-210ENST00000427710 ATP5J2-PTCD1G3V325 749 aa19.19■□□□□ 0.66
RTN4-210ENST00000427710 PARP10Q53GL7 1025 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms