RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 HSP90AB4PQ58FF6 505 aa26.77■■□□□ 1.88
CNEP1R1-202ENST00000427478 BICC1Q9H694 974 aaKnown RBP26.77■■□□□ 1.88
CNEP1R1-202ENST00000427478 NUP188Q5SRE5 1749 aa26.77■■□□□ 1.88
CNEP1R1-202ENST00000427478 ADAMTS2O95450 1211 aa26.77■■□□□ 1.88
CNEP1R1-202ENST00000427478 NUTM1Q86Y26 1132 aa26.77■■□□□ 1.88
CNEP1R1-202ENST00000427478 STAP2Q9UGK3 403 aa26.77■■□□□ 1.88
CNEP1R1-202ENST00000427478 NRAPQ86VF7 1730 aa26.76■■□□□ 1.88
CNEP1R1-202ENST00000427478 OS9Q13438 667 aaPredicted RBP26.76■■□□□ 1.87
CNEP1R1-202ENST00000427478 EIF5BO60841 1220 aaKnown RBP26.75■■□□□ 1.87
CNEP1R1-202ENST00000427478 A1BGP04217 495 aa26.75■■□□□ 1.87
CNEP1R1-202ENST00000427478 PLBD2Q8NHP8 589 aa26.75■■□□□ 1.87
CNEP1R1-202ENST00000427478 PA2G4Q9UQ80 394 aaKnown RBP26.74■■□□□ 1.87
CNEP1R1-202ENST00000427478 PIP4K2BP78356 416 aa26.73■■□□□ 1.87
CNEP1R1-202ENST00000427478 PIGBQ92521 554 aa26.73■■□□□ 1.87
CNEP1R1-202ENST00000427478 AOX1Q06278 1338 aa26.73■■□□□ 1.87
CNEP1R1-202ENST00000427478 AK9Q5TCS8 1911 aa26.73■■□□□ 1.87
CNEP1R1-202ENST00000427478 ATP5J2-PTCD1G3V325 749 aa26.72■■□□□ 1.87
CNEP1R1-202ENST00000427478 KIF2CQ99661 725 aa26.72■■□□□ 1.87
CNEP1R1-202ENST00000427478 TRIM6-TRIM34B2RNG4 842 aa26.71■■□□□ 1.87
CNEP1R1-202ENST00000427478 TTLL7Q6ZT98 887 aa26.71■■□□□ 1.87
CNEP1R1-202ENST00000427478 ASAP1Q9ULH1 1129 aa26.71■■□□□ 1.87
CNEP1R1-202ENST00000427478 LRP6O75581 1613 aa26.71■■□□□ 1.87
CNEP1R1-202ENST00000427478 JARID2Q92833 1246 aaPredicted RBP26.71■■□□□ 1.87
CNEP1R1-202ENST00000427478 RILPL2Q969X0 211 aa26.7■■□□□ 1.86
CNEP1R1-202ENST00000427478 SLKQ9H2G2 1235 aaPredicted RBP26.7■■□□□ 1.86
CNEP1R1-202ENST00000427478 KAT6BQ8WYB5 2073 aa26.69■■□□□ 1.86
CNEP1R1-202ENST00000427478 EXOC5O00471 708 aa26.69■■□□□ 1.86
CNEP1R1-202ENST00000427478 EPHA10Q5JZY3 1008 aa26.69■■□□□ 1.86
CNEP1R1-202ENST00000427478 HSCBQ8IWL3 235 aa26.69■■□□□ 1.86
CNEP1R1-202ENST00000427478 NUTM2BA6NNL0 878 aaPredicted RBP26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 NUTM2EB1AL46 878 aaPredicted RBP26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 NUTM2AQ8IVF1 878 aaPredicted RBP26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 DOT1LQ8TEK3 1739 aa26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 UBE3BQ7Z3V4 1068 aa26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 ERC1Q8IUD2 1116 aa26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 USP26Q9BXU7 913 aa26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 ATG3Q9NT62 314 aa26.68■■□□□ 1.86
CNEP1R1-202ENST00000427478 TOM1O60784 492 aa26.67■■□□□ 1.86
CNEP1R1-202ENST00000427478 RTL5Q5HYW3 569 aaPredicted RBP26.67■■□□□ 1.86
CNEP1R1-202ENST00000427478 TJP1Q07157 1748 aa26.67■■□□□ 1.86
CNEP1R1-202ENST00000427478 ERC2O15083 957 aa26.66■■□□□ 1.86
CNEP1R1-202ENST00000427478 UNC5CLQ8IV45 518 aa26.66■■□□□ 1.86
CNEP1R1-202ENST00000427478 PI4K2BQ8TCG2 481 aa26.66■■□□□ 1.86
CNEP1R1-202ENST00000427478 A0A087WZG4 1122 aa26.66■■□□□ 1.86
CNEP1R1-202ENST00000427478 CLASRPQ8N2M8 674 aaKnown RBP26.66■■□□□ 1.86
CNEP1R1-202ENST00000427478 BCL9O00512 1426 aa26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 SPRYD3Q8NCJ5 442 aa26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 ZBTB3Q9H5J0 574 aa26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 REC8O95072 547 aa26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 DNAJC10Q8IXB1 793 aa26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 RBM42Q9BTD8 480 aaKnown RBP26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 SPATA31A1Q5TZJ5 1347 aa26.65■■□□□ 1.86
CNEP1R1-202ENST00000427478 SNX21Q969T3 373 aa26.64■■□□□ 1.86
CNEP1R1-202ENST00000427478 NWD2Q9ULI1 1742 aa26.64■■□□□ 1.85
CNEP1R1-202ENST00000427478 G3BP1Q13283 466 aaKnown RBP eCLIP26.63■■□□□ 1.85
CNEP1R1-202ENST00000427478 VSIG10Q8N0Z9 540 aa26.63■■□□□ 1.85
CNEP1R1-202ENST00000427478 KLHDC4Q8TBB5 520 aa26.63■■□□□ 1.85
CNEP1R1-202ENST00000427478 SIL1Q9H173 461 aa26.63■■□□□ 1.85
CNEP1R1-202ENST00000427478 MAP4K4O95819 1239 aaPredicted RBP26.63■■□□□ 1.85
CNEP1R1-202ENST00000427478 SYTL4Q96C24 671 aaPredicted RBP26.63■■□□□ 1.85
CNEP1R1-202ENST00000427478 COL15A1P39059 1388 aa26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 ZNF330Q9Y3S2 320 aaPredicted RBP26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 USP42Q9H9J4 1324 aaKnown RBP26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 SASH1O94885 1247 aa26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 CHMLP26374 656 aa26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 ESYT1Q9BSJ8 1104 aa26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 TEX13AQ9BXU3 409 aaPredicted RBP26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 ANTXR1Q9H6X2 564 aa26.62■■□□□ 1.85
CNEP1R1-202ENST00000427478 CASP7P55210 303 aa26.61■■□□□ 1.85
CNEP1R1-202ENST00000427478 NFKBIBQ15653 356 aa26.61■■□□□ 1.85
CNEP1R1-202ENST00000427478 TTC41PQ6P2S7 1318 aa26.6■■□□□ 1.85
CNEP1R1-202ENST00000427478 CWC25Q9NXE8 425 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-202ENST00000427478 IFIT2P09913 472 aaKnown RBP26.6■■□□□ 1.85
CNEP1R1-202ENST00000427478 AACSQ86V21 672 aa26.6■■□□□ 1.85
CNEP1R1-202ENST00000427478 CDCA7Q9BWT1 371 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-202ENST00000427478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-202ENST00000427478 RABL6Q3YEC7 729 aaPredicted RBP26.59■■□□□ 1.85
CNEP1R1-202ENST00000427478 THRAP3Q9Y2W1 955 aaKnown RBP26.59■■□□□ 1.85
CNEP1R1-202ENST00000427478 CD2BP2O95400 341 aaKnown RBP26.58■■□□□ 1.85
CNEP1R1-202ENST00000427478 STARD3NLO95772 234 aa26.58■■□□□ 1.85
CNEP1R1-202ENST00000427478 DDB1Q16531 1140 aa26.58■■□□□ 1.85
CNEP1R1-202ENST00000427478 H7C1W4 665 aa26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 GLRX3O76003 335 aaKnown RBP26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 RFX5P48382 616 aaPredicted RBP26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 PRIM1P49642 420 aaKnown RBP26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 GPATCH3Q96I76 525 aa26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 ECHDC1Q9NTX5 307 aa26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 CCDC9Q9Y3X0 531 aaKnown RBP26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 SLIT2O94813 1529 aa26.57■■□□□ 1.84
CNEP1R1-202ENST00000427478 CNTROBQ8N137 903 aa26.56■■□□□ 1.84
CNEP1R1-202ENST00000427478 SPATA31A5Q5VU36 1347 aa26.56■■□□□ 1.84
CNEP1R1-202ENST00000427478 SPATA31A7Q8IWB4 1347 aa26.56■■□□□ 1.84
CNEP1R1-202ENST00000427478 UBAP1LF5GYI3 381 aa26.56■■□□□ 1.84
CNEP1R1-202ENST00000427478 SLC4A9Q96Q91 983 aa26.56■■□□□ 1.84
CNEP1R1-202ENST00000427478 COPRSQ9NQ92 184 aa26.56■■□□□ 1.84
CNEP1R1-202ENST00000427478 RABEP1Q15276 862 aa26.55■■□□□ 1.84
CNEP1R1-202ENST00000427478 CCDC191Q8NCU4 936 aa26.55■■□□□ 1.84
CNEP1R1-202ENST00000427478 EAF2Q96CJ1 260 aaPredicted RBP26.55■■□□□ 1.84
CNEP1R1-202ENST00000427478 MYT1Q01538 1121 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms