RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 STX6O43752 255 aa17.31■□□□□ 0.36
ERCC3-202ENST00000426778 TPM2P07951 284 aa17.31■□□□□ 0.36
ERCC3-202ENST00000426778 DNM1Q05193 864 aaKnown RBP17.31■□□□□ 0.36
ERCC3-202ENST00000426778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.366e-7■■■■□ 22.3
ERCC3-202ENST00000426778 UQCRHLA0A096LP55 91 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 UQCRHP07919 91 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 RAB11FIP3O75154 756 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 ZSCAN22P10073 491 aaPredicted RBP17.3■□□□□ 0.36
ERCC3-202ENST00000426778 GJB2P29033 226 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
ERCC3-202ENST00000426778 TSC1Q92574 1164 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 TTC12Q9H892 705 aaPredicted RBP17.3■□□□□ 0.36
ERCC3-202ENST00000426778 TBX22Q9Y458 520 aa17.3■□□□□ 0.36
ERCC3-202ENST00000426778 KCNJ4P48050 445 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 AACSQ86V21 672 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
ERCC3-202ENST00000426778 TAF6LQ9Y6J9 622 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 ADCY9O60503 1353 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 NDUFB9Q9Y6M9 179 aa17.29■□□□□ 0.36
ERCC3-202ENST00000426778 CCDC39Q9UFE4 941 aa17.28■□□□□ 0.36
ERCC3-202ENST00000426778 CCDC9Q9Y3X0 531 aaKnown RBP17.28■□□□□ 0.36
ERCC3-202ENST00000426778 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
ERCC3-202ENST00000426778 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
ERCC3-202ENST00000426778 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
ERCC3-202ENST00000426778 ZNF500O60304 480 aaPredicted RBP17.27■□□□□ 0.36
ERCC3-202ENST00000426778 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.36
ERCC3-202ENST00000426778 DNTTIP2Q5QJE6 756 aaKnown RBP17.27■□□□□ 0.36
ERCC3-202ENST00000426778 PHF8Q9UPP1 1060 aa17.27■□□□□ 0.36
ERCC3-202ENST00000426778 FAM177BA6PVY3 158 aa17.27■□□□□ 0.36
ERCC3-202ENST00000426778 CHGBP05060 677 aa17.27■□□□□ 0.36
ERCC3-202ENST00000426778 F13A1P00488 732 aa17.27■□□□□ 0.35
ERCC3-202ENST00000426778 PSME1Q06323 249 aa17.27■□□□□ 0.35
ERCC3-202ENST00000426778 BOLA2Q9H3K6 86 aa17.27■□□□□ 0.35
ERCC3-202ENST00000426778 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.35
ERCC3-202ENST00000426778 HYPKQ9NX55 129 aa17.27■□□□□ 0.35
ERCC3-202ENST00000426778 STK3Q13188 491 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 ADCY5O95622 1261 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 ME3Q16798 604 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 HS1BP3Q53T59 392 aa17.26■□□□□ 0.35
ERCC3-202ENST00000426778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-202ENST00000426778 AOX1Q06278 1338 aa17.25■□□□□ 0.35
ERCC3-202ENST00000426778 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
ERCC3-202ENST00000426778 MYL6BP14649 208 aa17.25■□□□□ 0.35
ERCC3-202ENST00000426778 CAMK4Q16566 473 aa17.25■□□□□ 0.35
ERCC3-202ENST00000426778 IP6K1Q92551 441 aa17.25■□□□□ 0.35
ERCC3-202ENST00000426778 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
ERCC3-202ENST00000426778 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
ERCC3-202ENST00000426778 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
ERCC3-202ENST00000426778 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
ERCC3-202ENST00000426778 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
ERCC3-202ENST00000426778 BICC1Q9H694 974 aaKnown RBP17.24■□□□□ 0.35
ERCC3-202ENST00000426778 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
ERCC3-202ENST00000426778 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
ERCC3-202ENST00000426778 RBM8AQ9Y5S9 174 aaKnown RBP17.24■□□□□ 0.35
ERCC3-202ENST00000426778 CEMIPQ8WUJ3 1361 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
ERCC3-202ENST00000426778 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 PPFIA3O75145 1194 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 MTMR6Q9Y217 621 aa17.23■□□□□ 0.35
ERCC3-202ENST00000426778 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 AP5Z1O43299 807 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 SASH1O94885 1247 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 GLIPR1L2Q4G1C9 344 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 DBF4Q9UBU7 674 aaPredicted RBP17.22■□□□□ 0.35
ERCC3-202ENST00000426778 CYP46A1Q9Y6A2 500 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 PHF14O94880 888 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 PXDNQ92626 1479 aa17.22■□□□□ 0.35
ERCC3-202ENST00000426778 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
ERCC3-202ENST00000426778 TFIP11Q9UBB9 837 aaKnown RBP17.21■□□□□ 0.35
ERCC3-202ENST00000426778 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
ERCC3-202ENST00000426778 UBE2HP62256 183 aa17.21■□□□□ 0.35
ERCC3-202ENST00000426778 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
ERCC3-202ENST00000426778 ZMYND15Q9H091 742 aa17.21■□□□□ 0.35
ERCC3-202ENST00000426778 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
ERCC3-202ENST00000426778 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-202ENST00000426778 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 FOSBP53539 338 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 FSD1Q9BTV5 496 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 LTN1O94822 1766 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 CCDC171Q6TFL3 1326 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 ZNF589Q86UQ0 364 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-202ENST00000426778 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
ERCC3-202ENST00000426778 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
ERCC3-202ENST00000426778 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
ERCC3-202ENST00000426778 LARP1BQ659C4 914 aaKnown RBP17.19■□□□□ 0.34
ERCC3-202ENST00000426778 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
ERCC3-202ENST00000426778 KSR2Q6VAB6 950 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms