RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 NEURL1BA8MQ27 555 aa21.63■■□□□ 1.05
FN1-208ENST00000426059 ERBB4Q15303 1308 aa21.63■■□□□ 1.05
FN1-208ENST00000426059 PPP1R42Q7Z4L9 355 aa21.63■■□□□ 1.05
FN1-208ENST00000426059 VSIG10Q8N0Z9 540 aa21.63■■□□□ 1.05
FN1-208ENST00000426059 ZBTB3Q9H5J0 574 aa21.63■■□□□ 1.05
FN1-208ENST00000426059 ARFGEF2Q9Y6D5 1785 aa21.63■■□□□ 1.05
FN1-208ENST00000426059 PLBD2Q8NHP8 589 aa21.62■■□□□ 1.05
FN1-208ENST00000426059 GRM8O00222 908 aa21.61■■□□□ 1.05
FN1-208ENST00000426059 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
FN1-208ENST00000426059 ARXQ96QS3 562 aa21.61■■□□□ 1.05
FN1-208ENST00000426059 SRGAP3O43295 1099 aa21.6■■□□□ 1.05
FN1-208ENST00000426059 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
FN1-208ENST00000426059 OTUD7AQ8TE49 926 aaPredicted RBP21.6■■□□□ 1.05
FN1-208ENST00000426059 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.6■■□□□ 1.05
FN1-208ENST00000426059 STARD3NLO95772 234 aa21.6■■□□□ 1.05
FN1-208ENST00000426059 GCKRQ14397 625 aa21.6■■□□□ 1.05
FN1-208ENST00000426059 SUCLG2Q96I99 432 aa21.6■■□□□ 1.05
FN1-208ENST00000426059 GJD4Q96KN9 370 aaPredicted RBP21.6■■□□□ 1.05
FN1-208ENST00000426059 TEX13AQ9BXU3 409 aaPredicted RBP21.6■■□□□ 1.05
FN1-208ENST00000426059 AFDNP55196 1824 aaKnown RBP21.6■■□□□ 1.05
FN1-208ENST00000426059 CYP19A1P11511 503 aaPredicted RBP21.59■■□□□ 1.05
FN1-208ENST00000426059 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
FN1-208ENST00000426059 SSH3Q8TE77 659 aa21.58■■□□□ 1.05
FN1-208ENST00000426059 ZBTB47Q9UFB7 747 aaPredicted RBP21.58■■□□□ 1.05
FN1-208ENST00000426059 ZBTB1Q9Y2K1 713 aa21.58■■□□□ 1.04
FN1-208ENST00000426059 SEC24BO95487 1268 aa21.57■■□□□ 1.04
FN1-208ENST00000426059 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
FN1-208ENST00000426059 ATP6V1AP38606 617 aa21.56■■□□□ 1.04
FN1-208ENST00000426059 BICC1Q9H694 974 aaKnown RBP21.56■■□□□ 1.04
FN1-208ENST00000426059 TJP1Q07157 1748 aa21.56■■□□□ 1.04
FN1-208ENST00000426059 NUP188Q5SRE5 1749 aa21.56■■□□□ 1.04
FN1-208ENST00000426059 UTYO14607 1347 aa21.56■■□□□ 1.04
FN1-208ENST00000426059 POLA2Q14181 598 aa21.55■■□□□ 1.04
FN1-208ENST00000426059 PLEKHM2Q8IWE5 1019 aa21.55■■□□□ 1.04
FN1-208ENST00000426059 SURF6O75683 361 aaKnown RBP21.55■■□□□ 1.04
FN1-208ENST00000426059 UBE3BQ7Z3V4 1068 aa21.55■■□□□ 1.04
FN1-208ENST00000426059 A0A087WZG4 1122 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 LOC102724428A0A0B4J2F2 783 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 SIK1P57059 783 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 EPHA10Q5JZY3 1008 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 KCNQ4P56696 695 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 EP400Q96L91 3159 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 THSD7AQ9UPZ6 1657 aa21.54■■□□□ 1.04
FN1-208ENST00000426059 PALLDQ8WX93 1383 aa21.53■■□□□ 1.04
FN1-208ENST00000426059 ITPK1Q13572 414 aa21.53■■□□□ 1.04
FN1-208ENST00000426059 QTRT2Q9H974 415 aaKnown RBP21.53■■□□□ 1.04
FN1-208ENST00000426059 TRPC5Q9UL62 973 aaPredicted RBP21.53■■□□□ 1.04
FN1-208ENST00000426059 PA2G4Q9UQ80 394 aaKnown RBP21.53■■□□□ 1.04
FN1-208ENST00000426059 IBTKQ9P2D0 1353 aaPredicted RBP21.52■■□□□ 1.04
FN1-208ENST00000426059 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
FN1-208ENST00000426059 IL1RAPL2Q9NP60 686 aa21.52■■□□□ 1.04
FN1-208ENST00000426059 ATRNO75882 1429 aa21.51■■□□□ 1.03
FN1-208ENST00000426059 MTX1Q13505 466 aa21.5■■□□□ 1.03
FN1-208ENST00000426059 HLFQ16534 295 aa21.5■■□□□ 1.03
FN1-208ENST00000426059 KIF6Q6ZMV9 814 aa21.5■■□□□ 1.03
FN1-208ENST00000426059 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
FN1-208ENST00000426059 TBC1D2BQ9UPU7 963 aa21.5■■□□□ 1.03
FN1-208ENST00000426059 TSHZ3Q63HK5 1081 aa21.5■■□□□ 1.03
FN1-208ENST00000426059 GSPT1P15170 499 aaKnown RBP21.49■■□□□ 1.03
FN1-208ENST00000426059 CRKLP46109 303 aaKnown RBP21.49■■□□□ 1.03
FN1-208ENST00000426059 KLHDC4Q8TBB5 520 aa21.49■■□□□ 1.03
FN1-208ENST00000426059 CWC25Q9NXE8 425 aaPredicted RBP21.49■■□□□ 1.03
FN1-208ENST00000426059 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
FN1-208ENST00000426059 HDAC5Q9UQL6 1122 aa21.48■■□□□ 1.03
FN1-208ENST00000426059 CASP7P55210 303 aa21.47■■□□□ 1.03
FN1-208ENST00000426059 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
FN1-208ENST00000426059 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
FN1-208ENST00000426059 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
FN1-208ENST00000426059 TCIRG1Q13488 830 aa21.47■■□□□ 1.03
FN1-208ENST00000426059 GPTP24298 496 aa21.46■■□□□ 1.03
FN1-208ENST00000426059 OS9Q13438 667 aaPredicted RBP21.46■■□□□ 1.03
FN1-208ENST00000426059 RHPN1Q8TCX5 695 aa21.46■■□□□ 1.03
FN1-208ENST00000426059 SMARCC1Q92922 1105 aaPredicted RBP21.46■■□□□ 1.03
FN1-208ENST00000426059 CCDC87Q9NVE4 849 aa21.46■■□□□ 1.03
FN1-208ENST00000426059 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
FN1-208ENST00000426059 SIL1Q9H173 461 aa21.46■■□□□ 1.03
FN1-208ENST00000426059 H7C1W4 665 aa21.45■■□□□ 1.02
FN1-208ENST00000426059 ONECUT3O60422 494 aaPredicted RBP21.45■■□□□ 1.02
FN1-208ENST00000426059 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
FN1-208ENST00000426059 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
FN1-208ENST00000426059 CCDC191Q8NCU4 936 aa21.45■■□□□ 1.02
FN1-208ENST00000426059 ISCA1Q9BUE6 129 aa21.45■■□□□ 1.02
FN1-208ENST00000426059 TTC22Q5TAA0 569 aa21.45■■□□□ 1.02
FN1-208ENST00000426059 NUTM1Q86Y26 1132 aa21.45■■□□□ 1.02
FN1-208ENST00000426059 GIGYF2Q6Y7W6 1299 aaKnown RBP21.44■■□□□ 1.02
FN1-208ENST00000426059 BTAF1O14981 1849 aa21.44■■□□□ 1.02
FN1-208ENST00000426059 RAB11FIP3O75154 756 aa21.44■■□□□ 1.02
FN1-208ENST00000426059 PDE1AP54750 535 aa21.44■■□□□ 1.02
FN1-208ENST00000426059 EIF5P55010 431 aaKnown RBP21.43■■□□□ 1.02
FN1-208ENST00000426059 SMIM5Q71RC9 77 aa21.43■■□□□ 1.02
FN1-208ENST00000426059 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
FN1-208ENST00000426059 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
FN1-208ENST00000426059 LMBR1LQ6UX01 489 aa21.43■■□□□ 1.02
FN1-208ENST00000426059 SYNE4Q8N205 404 aa21.43■■□□□ 1.02
FN1-208ENST00000426059 LINC00116Q8NCU8 138 aa21.43■■□□□ 1.02
FN1-208ENST00000426059 FOXO4P98177 505 aa21.42■■□□□ 1.02
FN1-208ENST00000426059 KIF1BPQ96EK5 621 aa21.42■■□□□ 1.02
FN1-208ENST00000426059 FAM89AQ96GI7 184 aa21.42■■□□□ 1.02
FN1-208ENST00000426059 CHMP3Q9Y3E7 222 aa21.42■■□□□ 1.02
FN1-208ENST00000426059 SALL3Q9BXA9 1300 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms