RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 ZNF526Q8TF50 670 aaPredicted RBP28.27■■■□□ 2.12
CDCP1-202ENST00000425231 HLFQ16534 295 aa28.26■■■□□ 2.12
CDCP1-202ENST00000425231 PDZRN3Q9UPQ7 1066 aa28.26■■■□□ 2.12
CDCP1-202ENST00000425231 NGEFQ8N5V2 710 aa28.26■■■□□ 2.11
CDCP1-202ENST00000425231 MYL6BP14649 208 aa28.24■■■□□ 2.11
CDCP1-202ENST00000425231 C9orf131Q5VYM1 1079 aa28.24■■■□□ 2.11
CDCP1-202ENST00000425231 NIP7Q9Y221 180 aaKnown RBP eCLIP28.24■■■□□ 2.11
CDCP1-202ENST00000425231 CHL1O00533 1208 aa28.23■■■□□ 2.11
CDCP1-202ENST00000425231 NPHP1O15259 732 aa28.23■■■□□ 2.11
CDCP1-202ENST00000425231 ST5P78524 1137 aa28.23■■■□□ 2.11
CDCP1-202ENST00000425231 NBPF5PQ86XG9 351 aaPredicted RBP28.23■■■□□ 2.11
CDCP1-202ENST00000425231 COL11A2P13942 1736 aaPredicted RBP28.23■■■□□ 2.11
CDCP1-202ENST00000425231 ERBB4Q15303 1308 aa28.22■■■□□ 2.11
CDCP1-202ENST00000425231 ERVV-1B6SEH8 477 aa28.22■■■□□ 2.11
CDCP1-202ENST00000425231 TTLL7Q6ZT98 887 aa28.22■■■□□ 2.11
CDCP1-202ENST00000425231 SBF1O95248 1867 aa28.21■■■□□ 2.11
CDCP1-202ENST00000425231 ZNF622Q969S3 477 aaKnown RBP eCLIP28.21■■■□□ 2.11
CDCP1-202ENST00000425231 MAP3K15Q6ZN16 1313 aa28.21■■■□□ 2.11
CDCP1-202ENST00000425231 PDIA6Q15084 440 aa28.2■■■□□ 2.11
CDCP1-202ENST00000425231 LRP10Q7Z4F1 713 aa28.2■■■□□ 2.11
CDCP1-202ENST00000425231 SRGNP10124 158 aa28.19■■■□□ 2.1
CDCP1-202ENST00000425231 TPTE2Q6XPS3 522 aa28.19■■■□□ 2.1
CDCP1-202ENST00000425231 NUP98P52948 1817 aa28.19■■■□□ 2.1
CDCP1-202ENST00000425231 ZNF316A6NFI3 1004 aaPredicted RBP28.18■■■□□ 2.1
CDCP1-202ENST00000425231 EIF2S2P20042 333 aaKnown RBP28.18■■■□□ 2.1
CDCP1-202ENST00000425231 CCDC184Q52MB2 194 aa28.18■■■□□ 2.1
CDCP1-202ENST00000425231 KIF6Q6ZMV9 814 aa28.18■■■□□ 2.1
CDCP1-202ENST00000425231 RNF181Q9P0P0 153 aa28.18■■■□□ 2.1
CDCP1-202ENST00000425231 RASSF7Q02833 373 aa28.17■■■□□ 2.1
CDCP1-202ENST00000425231 LAS1LQ9Y4W2 734 aaKnown RBP28.17■■■□□ 2.1
CDCP1-202ENST00000425231 KLRG2A4D1S0 409 aaPredicted RBP28.16■■■□□ 2.1
CDCP1-202ENST00000425231 FAM177BA6PVY3 158 aa28.16■■■□□ 2.1
CDCP1-202ENST00000425231 APAF1O14727 1248 aa28.16■■■□□ 2.1
CDCP1-202ENST00000425231 KRT24Q2M2I5 525 aa28.16■■■□□ 2.1
CDCP1-202ENST00000425231 STYK1Q6J9G0 422 aa28.16■■■□□ 2.1
CDCP1-202ENST00000425231 ZBTB3Q9H5J0 574 aa28.16■■■□□ 2.1
CDCP1-202ENST00000425231 KIF3CO14782 793 aa28.15■■■□□ 2.1
CDCP1-202ENST00000425231 PRELPP51888 382 aa28.15■■■□□ 2.1
CDCP1-202ENST00000425231 PROSER3Q2NL68 480 aa28.15■■■□□ 2.1
CDCP1-202ENST00000425231 MASTLQ96GX5 879 aa28.15■■■□□ 2.1
CDCP1-202ENST00000425231 CNKSR1Q969H4 720 aa28.14■■■□□ 2.1
CDCP1-202ENST00000425231 NFKBIEO00221 500 aa28.13■■■□□ 2.09
CDCP1-202ENST00000425231 C21orf2O43822 256 aa28.13■■■□□ 2.09
CDCP1-202ENST00000425231 ANXA1P04083 346 aa28.13■■■□□ 2.09
CDCP1-202ENST00000425231 CFAP44Q96MT7 982 aa28.13■■■□□ 2.09
CDCP1-202ENST00000425231 SLX4Q8IY92 1834 aa28.12■■■□□ 2.09
CDCP1-202ENST00000425231 GIGYF2Q6Y7W6 1299 aaKnown RBP28.12■■■□□ 2.09
CDCP1-202ENST00000425231 LMNB1P20700 586 aa28.11■■■□□ 2.09
CDCP1-202ENST00000425231 ZNF34Q8IZ26 560 aa28.11■■■□□ 2.09
CDCP1-202ENST00000425231 NECTIN2Q92692 538 aa28.11■■■□□ 2.09
CDCP1-202ENST00000425231 UBN2Q6ZU65 1347 aa28.11■■■□□ 2.09
CDCP1-202ENST00000425231 PRPF40BQ6NWY9 871 aaKnown RBP28.1■■■□□ 2.09
CDCP1-202ENST00000425231 ZNF219Q9P2Y4 722 aaPredicted RBP28.1■■■□□ 2.09
CDCP1-202ENST00000425231 GPTP24298 496 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 NYXQ9GZU5 481 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 ARFGEF2Q9Y6D5 1785 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 SENP3-EIF4A1A0A087X0R7 540 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 ZNF853P0CG23 659 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 NPR1P16066 1061 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 GTF2E1P29083 439 aaPredicted RBP28.09■■■□□ 2.09
CDCP1-202ENST00000425231 NMRK2Q9NPI5 230 aa28.09■■■□□ 2.09
CDCP1-202ENST00000425231 CACNA1SQ13698 1873 aa28.08■■■□□ 2.09
CDCP1-202ENST00000425231 FER1L6Q2WGJ9 1857 aa28.08■■■□□ 2.09
CDCP1-202ENST00000425231 CCDC88AQ3V6T2 1871 aa28.08■■■□□ 2.09
CDCP1-202ENST00000425231 SUSD4Q5VX71 490 aa28.08■■■□□ 2.09
CDCP1-202ENST00000425231 NUTM1Q86Y26 1132 aa28.08■■■□□ 2.09
CDCP1-202ENST00000425231 DDX21Q9NR30 783 aaKnown RBP eCLIP28.08■■■□□ 2.09
CDCP1-202ENST00000425231 MBIPQ9NS73 344 aa28.08■■■□□ 2.09
CDCP1-202ENST00000425231 HOXB7P09629 217 aa28.07■■■□□ 2.08
CDCP1-202ENST00000425231 COPS6Q7L5N1 327 aa28.07■■■□□ 2.08
CDCP1-202ENST00000425231 C7orf43Q8WVR3 580 aa28.07■■■□□ 2.08
CDCP1-202ENST00000425231 ABCC12Q96J65 1359 aa28.07■■■□□ 2.08
CDCP1-202ENST00000425231 IBTKQ9P2D0 1353 aaPredicted RBP28.06■■■□□ 2.08
CDCP1-202ENST00000425231 ZC3H4Q9UPT8 1303 aaKnown RBP28.06■■■□□ 2.08
CDCP1-202ENST00000425231 ERFEQ4G0M1 354 aa28.06■■■□□ 2.08
CDCP1-202ENST00000425231 XAGE3Q8WTP9 111 aa28.05■■■□□ 2.08
CDCP1-202ENST00000425231 TNRC6CQ9HCJ0 1690 aaKnown RBP28.05■■■□□ 2.08
CDCP1-202ENST00000425231 CRY2Q49AN0 593 aa28.04■■■□□ 2.08
CDCP1-202ENST00000425231 IFT57Q9NWB7 429 aa28.04■■■□□ 2.08
CDCP1-202ENST00000425231 CHPF2Q9P2E5 772 aa28.04■■■□□ 2.08
CDCP1-202ENST00000425231 KDM2BQ8NHM5 1336 aa28.03■■■□□ 2.08
CDCP1-202ENST00000425231 LTBP3Q9NS15 1303 aa28.03■■■□□ 2.08
CDCP1-202ENST00000425231 NTSR2O95665 410 aa28.03■■■□□ 2.08
CDCP1-202ENST00000425231 AIMP1Q12904 312 aaKnown RBP28.03■■■□□ 2.08
CDCP1-202ENST00000425231 HDGFL1Q5TGJ6 251 aa28.03■■■□□ 2.08
CDCP1-202ENST00000425231 DUSP27Q5VZP5 1158 aa28.03■■■□□ 2.08
CDCP1-202ENST00000425231 CALD1Q05682 793 aaKnown RBP28.02■■■□□ 2.08
CDCP1-202ENST00000425231 SOGA3Q5TF21 947 aa28.02■■■□□ 2.08
CDCP1-202ENST00000425231 ANP32CO43423 234 aa28.01■■■□□ 2.08
CDCP1-202ENST00000425231 GNAI1P63096 354 aa28.01■■■□□ 2.08
CDCP1-202ENST00000425231 PARP10Q53GL7 1025 aa28.01■■■□□ 2.08
CDCP1-202ENST00000425231 RIC1Q4ADV7 1423 aa28.01■■■□□ 2.07
CDCP1-202ENST00000425231 TOMM70O94826 608 aa28.01■■■□□ 2.07
CDCP1-202ENST00000425231 ALDH1B1P30837 517 aa28.01■■■□□ 2.07
CDCP1-202ENST00000425231 PPP1R42Q7Z4L9 355 aa28.01■■■□□ 2.07
CDCP1-202ENST00000425231 TAOK3Q9H2K8 898 aa28.01■■■□□ 2.07
CDCP1-202ENST00000425231 DBF4Q9UBU7 674 aaPredicted RBP28■■■□□ 2.07
CDCP1-202ENST00000425231 TIAM2Q8IVF5 1701 aa27.99■■■□□ 2.07
CDCP1-202ENST00000425231 MRS2Q9HD23 443 aa27.99■■■□□ 2.07
CDCP1-202ENST00000425231 DICER1Q9UPY3 1922 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms