RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ZNF652Q9Y2D9 606 aa24.29■■□□□ 1.48
NUP50-207ENST00000424634 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
NUP50-207ENST00000424634 KIF3CO14782 793 aa24.28■■□□□ 1.48
NUP50-207ENST00000424634 RGL2O15211 777 aa24.28■■□□□ 1.48
NUP50-207ENST00000424634 PRELPP51888 382 aa24.28■■□□□ 1.48
NUP50-207ENST00000424634 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
NUP50-207ENST00000424634 TRIM35Q9UPQ4 493 aa24.28■■□□□ 1.48
NUP50-207ENST00000424634 PDZRN3Q9UPQ7 1066 aa24.28■■□□□ 1.48
NUP50-207ENST00000424634 RASSF7Q02833 373 aa24.27■■□□□ 1.48
NUP50-207ENST00000424634 TTLL7Q6ZT98 887 aa24.27■■□□□ 1.48
NUP50-207ENST00000424634 NBPF5PQ86XG9 351 aaPredicted RBP24.27■■□□□ 1.48
NUP50-207ENST00000424634 RNF181Q9P0P0 153 aa24.27■■□□□ 1.48
NUP50-207ENST00000424634 NIP7Q9Y221 180 aaKnown RBP eCLIP24.27■■□□□ 1.48
NUP50-207ENST00000424634 NPHP1O15259 732 aa24.26■■□□□ 1.47
NUP50-207ENST00000424634 MYL6BP14649 208 aa24.26■■□□□ 1.47
NUP50-207ENST00000424634 ST5P78524 1137 aa24.26■■□□□ 1.47
NUP50-207ENST00000424634 LMOD3Q0VAK6 560 aa24.26■■□□□ 1.47
NUP50-207ENST00000424634 BABAM1Q9NWV8 329 aa24.26■■□□□ 1.47
NUP50-207ENST00000424634 NUP98P52948 1817 aa24.25■■□□□ 1.47
NUP50-207ENST00000424634 CCDC88AQ3V6T2 1871 aa24.24■■□□□ 1.47
NUP50-207ENST00000424634 SRGNP10124 158 aa24.24■■□□□ 1.47
NUP50-207ENST00000424634 FAM177BA6PVY3 158 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 ERVV-1B6SEH8 477 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 NFKBIEO00221 500 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 PDIA6Q15084 440 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 TPTE2Q6XPS3 522 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 NMRK2Q9NPI5 230 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 SLX4Q8IY92 1834 aa24.23■■□□□ 1.47
NUP50-207ENST00000424634 CEP350Q5VT06 3117 aa24.22■■□□□ 1.47
NUP50-207ENST00000424634 CHL1O00533 1208 aa24.22■■□□□ 1.47
NUP50-207ENST00000424634 C21orf2O43822 256 aa24.22■■□□□ 1.47
NUP50-207ENST00000424634 EIF2S2P20042 333 aaKnown RBP24.22■■□□□ 1.47
NUP50-207ENST00000424634 STYK1Q6J9G0 422 aa24.22■■□□□ 1.47
NUP50-207ENST00000424634 LRP10Q7Z4F1 713 aa24.22■■□□□ 1.47
NUP50-207ENST00000424634 ZNF219Q9P2Y4 722 aaPredicted RBP24.22■■□□□ 1.47
NUP50-207ENST00000424634 CACNA1SQ13698 1873 aa24.21■■□□□ 1.47
NUP50-207ENST00000424634 ERBB4Q15303 1308 aa24.2■■□□□ 1.46
NUP50-207ENST00000424634 KLRG2A4D1S0 409 aaPredicted RBP24.2■■□□□ 1.46
NUP50-207ENST00000424634 LMNB1P20700 586 aa24.2■■□□□ 1.46
NUP50-207ENST00000424634 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
NUP50-207ENST00000424634 MASTLQ96GX5 879 aa24.2■■□□□ 1.46
NUP50-207ENST00000424634 KRT24Q2M2I5 525 aa24.19■■□□□ 1.46
NUP50-207ENST00000424634 PROSER3Q2NL68 480 aa24.19■■□□□ 1.46
NUP50-207ENST00000424634 KIF6Q6ZMV9 814 aa24.19■■□□□ 1.46
NUP50-207ENST00000424634 CNKSR1Q969H4 720 aa24.19■■□□□ 1.46
NUP50-207ENST00000424634 ZBTB3Q9H5J0 574 aa24.19■■□□□ 1.46
NUP50-207ENST00000424634 FER1L6Q2WGJ9 1857 aa24.19■■□□□ 1.46
NUP50-207ENST00000424634 ANXA1P04083 346 aa24.18■■□□□ 1.46
NUP50-207ENST00000424634 PRPF40BQ6NWY9 871 aaKnown RBP24.18■■□□□ 1.46
NUP50-207ENST00000424634 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
NUP50-207ENST00000424634 NECTIN2Q92692 538 aa24.17■■□□□ 1.46
NUP50-207ENST00000424634 ARFGEF2Q9Y6D5 1785 aa24.16■■□□□ 1.46
NUP50-207ENST00000424634 GPTP24298 496 aa24.16■■□□□ 1.46
NUP50-207ENST00000424634 CCDC184Q52MB2 194 aa24.16■■□□□ 1.46
NUP50-207ENST00000424634 C7orf43Q8WVR3 580 aa24.16■■□□□ 1.46
NUP50-207ENST00000424634 UBN2Q6ZU65 1347 aa24.15■■□□□ 1.46
NUP50-207ENST00000424634 NPR1P16066 1061 aa24.15■■□□□ 1.46
NUP50-207ENST00000424634 GIGYF2Q6Y7W6 1299 aaKnown RBP24.15■■□□□ 1.46
NUP50-207ENST00000424634 NUTM1Q86Y26 1132 aa24.15■■□□□ 1.46
NUP50-207ENST00000424634 ZNF34Q8IZ26 560 aa24.15■■□□□ 1.46
NUP50-207ENST00000424634 APAF1O14727 1248 aa24.14■■□□□ 1.45
NUP50-207ENST00000424634 ERFEQ4G0M1 354 aa24.14■■□□□ 1.45
NUP50-207ENST00000424634 SUSD4Q5VX71 490 aa24.14■■□□□ 1.45
NUP50-207ENST00000424634 RRAGCQ9HB90 399 aa24.14■■□□□ 1.45
NUP50-207ENST00000424634 KDM2BQ8NHM5 1336 aa24.13■■□□□ 1.45
NUP50-207ENST00000424634 TOMM70O94826 608 aa24.13■■□□□ 1.45
NUP50-207ENST00000424634 GTF2E1P29083 439 aaPredicted RBP24.13■■□□□ 1.45
NUP50-207ENST00000424634 NYXQ9GZU5 481 aa24.13■■□□□ 1.45
NUP50-207ENST00000424634 TNRC6CQ9HCJ0 1690 aaKnown RBP24.13■■□□□ 1.45
NUP50-207ENST00000424634 ABCC12Q96J65 1359 aa24.13■■□□□ 1.45
NUP50-207ENST00000424634 ZC3H4Q9UPT8 1303 aaKnown RBP24.12■■□□□ 1.45
NUP50-207ENST00000424634 DICER1Q9UPY3 1922 aaKnown RBP24.12■■□□□ 1.45
NUP50-207ENST00000424634 HSPA6P17066 643 aa24.12■■□□□ 1.45
NUP50-207ENST00000424634 CFAP44Q96MT7 982 aa24.12■■□□□ 1.45
NUP50-207ENST00000424634 TIAM2Q8IVF5 1701 aa24.11■■□□□ 1.45
NUP50-207ENST00000424634 COPS6Q7L5N1 327 aa24.11■■□□□ 1.45
NUP50-207ENST00000424634 LTBP3Q9NS15 1303 aa24.1■■□□□ 1.45
NUP50-207ENST00000424634 GLTPD2A6NH11 291 aa24.1■■□□□ 1.45
NUP50-207ENST00000424634 OLFM4Q6UX06 510 aa24.1■■□□□ 1.45
NUP50-207ENST00000424634 NTSR2O95665 410 aa24.09■■□□□ 1.45
NUP50-207ENST00000424634 ZNF853P0CG23 659 aa24.09■■□□□ 1.45
NUP50-207ENST00000424634 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
NUP50-207ENST00000424634 CRY2Q49AN0 593 aa24.09■■□□□ 1.45
NUP50-207ENST00000424634 XAGE3Q8WTP9 111 aa24.09■■□□□ 1.45
NUP50-207ENST00000424634 TAOK3Q9H2K8 898 aa24.09■■□□□ 1.45
NUP50-207ENST00000424634 DDX21Q9NR30 783 aaKnown RBP eCLIP24.09■■□□□ 1.45
NUP50-207ENST00000424634 IBTKQ9P2D0 1353 aaPredicted RBP24.08■■□□□ 1.45
NUP50-207ENST00000424634 SOGA3Q5TF21 947 aa24.08■■□□□ 1.45
NUP50-207ENST00000424634 MBIPQ9NS73 344 aa24.08■■□□□ 1.45
NUP50-207ENST00000424634 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
NUP50-207ENST00000424634 CHPF2Q9P2E5 772 aa24.07■■□□□ 1.44
NUP50-207ENST00000424634 ALDH1B1P30837 517 aa24.06■■□□□ 1.44
NUP50-207ENST00000424634 C3orf67Q6ZVT6 689 aa24.06■■□□□ 1.44
NUP50-207ENST00000424634 RBM46Q8TBY0 533 aaKnown RBP24.06■■□□□ 1.44
NUP50-207ENST00000424634 HOXB7P09629 217 aa24.05■■□□□ 1.44
NUP50-207ENST00000424634 PARP10Q53GL7 1025 aa24.05■■□□□ 1.44
NUP50-207ENST00000424634 CCDC93Q567U6 631 aa24.05■■□□□ 1.44
NUP50-207ENST00000424634 HDGFL1Q5TGJ6 251 aa24.05■■□□□ 1.44
NUP50-207ENST00000424634 DUSP27Q5VZP5 1158 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms