RNA–Protein interactions for RNA: ENST00000424337.6

GTF2IRD1-202, Transcript of GTF2I repeat domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-202ENST00000424337 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
GTF2IRD1-202ENST00000424337 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
GTF2IRD1-202ENST00000424337 HMMRO75330 724 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 CKAP2LQ8IYA6 745 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 IL25Q9H293 177 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 CPS1P31327 1500 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 CHMP4AQ9BY43 222 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 ZNF215Q9UL58 517 aaPredicted RBP16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
GTF2IRD1-202ENST00000424337 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
GTF2IRD1-202ENST00000424337 PNPLA6Q8IY17 1366 aa16.65■□□□□ 0.26
GTF2IRD1-202ENST00000424337 CEP135Q66GS9 1140 aa16.65■□□□□ 0.26
GTF2IRD1-202ENST00000424337 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
GTF2IRD1-202ENST00000424337 PLEKHG3A1L390 1219 aa16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ZNF397Q8NF99 534 aaPredicted RBP16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CAPN2P17655 700 aa16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CACTINQ8WUQ7 758 aaKnown RBP16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 AK2P54819 239 aa16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 TYRO3Q06418 890 aa16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
GTF2IRD1-202ENST00000424337 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CPA1P15085 419 aa16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CALCOCO1Q9P1Z2 691 aa16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 AMPHP49418 695 aa16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 RBM6P78332 1123 aaKnown RBP16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
GTF2IRD1-202ENST00000424337 F6X3S4 739 aa16.62■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ELF2Q15723 593 aa16.62■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CBX8Q9HC52 389 aa16.62■□□□□ 0.25
GTF2IRD1-202ENST00000424337 DIP2AQ14689 1571 aa16.62■□□□□ 0.25
GTF2IRD1-202ENST00000424337 MAP4K4O95819 1239 aaPredicted RBP16.62■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CABLES1Q8TDN4 633 aa16.62■□□□□ 0.25
GTF2IRD1-202ENST00000424337 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 LIG1P18858 919 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 NUP62CLQ9H1M0 184 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ZNF75DP51815 510 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 HSP90AB2PQ58FF8 381 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 HSPA4P34932 840 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 LIMCH1Q9UPQ0 1083 aa16.61■□□□□ 0.25
GTF2IRD1-202ENST00000424337 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 GJB2P29033 226 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 LARGE1O95461 756 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 TRMT1Q9NXH9 659 aaKnown RBP16.6■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ZC3H6P61129 1189 aaKnown RBP16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CPSF1Q10570 1443 aaKnown RBP16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 CADPS2Q86UW7 1296 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 USP6P35125 1406 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 PTPN14Q15678 1187 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
GTF2IRD1-202ENST00000424337 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.25
GTF2IRD1-202ENST00000424337 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
GTF2IRD1-202ENST00000424337 HNRNPH2P55795 449 aaKnown RBP16.58■□□□□ 0.24
GTF2IRD1-202ENST00000424337 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
GTF2IRD1-202ENST00000424337 CERS3Q8IU89 383 aa16.58■□□□□ 0.24
GTF2IRD1-202ENST00000424337 DACT1Q9NYF0 836 aa16.58■□□□□ 0.24
GTF2IRD1-202ENST00000424337 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
GTF2IRD1-202ENST00000424337 TULP2O00295 520 aa16.57■□□□□ 0.24
GTF2IRD1-202ENST00000424337 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
GTF2IRD1-202ENST00000424337 ZNF446Q9NWS9 450 aa16.57■□□□□ 0.24
GTF2IRD1-202ENST00000424337 SALL3Q9BXA9 1300 aa16.57■□□□□ 0.24
GTF2IRD1-202ENST00000424337 TTC14Q96N46 770 aa16.57■□□□□ 0.24
GTF2IRD1-202ENST00000424337 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
GTF2IRD1-202ENST00000424337 RAD50Q92878 1312 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 GOLGA6L4A6NEF3 574 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 ZNF165P49910 485 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 DNAJC25Q9H1X3 360 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 CASTP20810 708 aaKnown RBP16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 SLC20A2Q08357 652 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 FAM53CQ9NYF3 392 aa16.56■□□□□ 0.24
GTF2IRD1-202ENST00000424337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
GTF2IRD1-202ENST00000424337 IL13P35225 146 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms