RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 SURF6O75683 361 aaKnown RBP20.32■□□□□ 0.84
CMTM3-202ENST00000424011 ANKRD13DQ6ZTN6 518 aa20.32■□□□□ 0.84
CMTM3-202ENST00000424011 SHANK3Q9BYB0 1731 aa20.32■□□□□ 0.84
CMTM3-202ENST00000424011 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
CMTM3-202ENST00000424011 METTL22Q9BUU2 404 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-202ENST00000424011 CDCA7Q9BWT1 371 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-202ENST00000424011 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
CMTM3-202ENST00000424011 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
CMTM3-202ENST00000424011 LRP10Q7Z4F1 713 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 C8orf37Q96NL8 207 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 NWD2Q9ULI1 1742 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 EXOC5O00471 708 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 SDSP20132 328 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 MX1P20591 662 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 KIF1BPQ96EK5 621 aa20.31■□□□□ 0.84
CMTM3-202ENST00000424011 SPRYD3Q8NCJ5 442 aa20.3■□□□□ 0.84
CMTM3-202ENST00000424011 AOX1Q06278 1338 aa20.3■□□□□ 0.84
CMTM3-202ENST00000424011 SALL3Q9BXA9 1300 aa20.3■□□□□ 0.84
CMTM3-202ENST00000424011 FNBP4Q8N3X1 1017 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-202ENST00000424011 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
CMTM3-202ENST00000424011 STAP2Q9UGK3 403 aa20.3■□□□□ 0.84
CMTM3-202ENST00000424011 LAMB4A4D0S4 1761 aa20.29■□□□□ 0.84
CMTM3-202ENST00000424011 KIF2CQ99661 725 aa20.29■□□□□ 0.84
CMTM3-202ENST00000424011 NEURL1BA8MQ27 555 aa20.28■□□□□ 0.84
CMTM3-202ENST00000424011 IGKV5-2P06315 115 aa20.28■□□□□ 0.84
CMTM3-202ENST00000424011 TNS2Q63HR2 1409 aa20.28■□□□□ 0.84
CMTM3-202ENST00000424011 BCL9LQ86UU0 1499 aa20.28■□□□□ 0.84
CMTM3-202ENST00000424011 BARGINQ6ZT62 677 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 PLBD2Q8NHP8 589 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 RHPN1Q8TCX5 695 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 RRAGDQ9NQL2 400 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-202ENST00000424011 PAPPAQ13219 1627 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 GLI3P10071 1580 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 GCKRQ14397 625 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 ERC1Q8IUD2 1116 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 MYD88Q99836 296 aa20.27■□□□□ 0.84
CMTM3-202ENST00000424011 CCDC9Q9Y3X0 531 aaKnown RBP20.27■□□□□ 0.84
CMTM3-202ENST00000424011 LRP6O75581 1613 aa20.27■□□□□ 0.83
CMTM3-202ENST00000424011 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.83
CMTM3-202ENST00000424011 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
CMTM3-202ENST00000424011 UBR2Q8IWV8 1755 aa20.26■□□□□ 0.83
CMTM3-202ENST00000424011 VPS72Q15906 364 aa20.25■□□□□ 0.83
CMTM3-202ENST00000424011 SNX21Q969T3 373 aa20.25■□□□□ 0.83
CMTM3-202ENST00000424011 TEX13AQ9BXU3 409 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-202ENST00000424011 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-202ENST00000424011 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
CMTM3-202ENST00000424011 RRP9O43818 475 aaKnown RBP20.24■□□□□ 0.83
CMTM3-202ENST00000424011 DDB1Q16531 1140 aa20.24■□□□□ 0.83
CMTM3-202ENST00000424011 PTCD1O75127 700 aaKnown RBP20.24■□□□□ 0.83
CMTM3-202ENST00000424011 REC8O95072 547 aa20.23■□□□□ 0.83
CMTM3-202ENST00000424011 HSP90AA2PQ14568 343 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-202ENST00000424011 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
CMTM3-202ENST00000424011 WNK3Q9BYP7 1800 aa20.22■□□□□ 0.83
CMTM3-202ENST00000424011 BICC1Q9H694 974 aaKnown RBP20.22■□□□□ 0.83
CMTM3-202ENST00000424011 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-202ENST00000424011 USP21Q9UK80 565 aa20.22■□□□□ 0.83
CMTM3-202ENST00000424011 COL15A1P39059 1388 aa20.22■□□□□ 0.83
CMTM3-202ENST00000424011 NBPF26B4DH59 902 aa20.21■□□□□ 0.83
CMTM3-202ENST00000424011 NBPF14Q5TI25 921 aa20.21■□□□□ 0.83
CMTM3-202ENST00000424011 NBPF10Q6P3W6 841 aaKnown RBP20.21■□□□□ 0.83
CMTM3-202ENST00000424011 CLASRPQ8N2M8 674 aaKnown RBP20.21■□□□□ 0.83
CMTM3-202ENST00000424011 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
CMTM3-202ENST00000424011 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
CMTM3-202ENST00000424011 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
CMTM3-202ENST00000424011 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
CMTM3-202ENST00000424011 TOGARAM1Q9Y4F4 1720 aa20.2■□□□□ 0.82
CMTM3-202ENST00000424011 ERC2O15083 957 aa20.2■□□□□ 0.82
CMTM3-202ENST00000424011 PIGBQ92521 554 aa20.2■□□□□ 0.82
CMTM3-202ENST00000424011 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
CMTM3-202ENST00000424011 CD2BP2O95400 341 aaKnown RBP20.19■□□□□ 0.82
CMTM3-202ENST00000424011 MEX3CQ5U5Q3 659 aaKnown RBP20.19■□□□□ 0.82
CMTM3-202ENST00000424011 TSHZ3Q63HK5 1081 aa20.19■□□□□ 0.82
CMTM3-202ENST00000424011 G3BP1Q13283 466 aaKnown RBP eCLIP20.19■□□□□ 0.82
CMTM3-202ENST00000424011 NUTM1Q86Y26 1132 aa20.19■□□□□ 0.82
CMTM3-202ENST00000424011 GPATCH3Q96I76 525 aa20.19■□□□□ 0.82
CMTM3-202ENST00000424011 TTC41PQ6P2S7 1318 aa20.18■□□□□ 0.82
CMTM3-202ENST00000424011 A1BGP04217 495 aa20.18■□□□□ 0.82
CMTM3-202ENST00000424011 FAM98CQ17RN3 349 aaKnown RBP20.18■□□□□ 0.82
CMTM3-202ENST00000424011 USP26Q9BXU7 913 aa20.18■□□□□ 0.82
CMTM3-202ENST00000424011 USP42Q9H9J4 1324 aaKnown RBP20.18■□□□□ 0.82
CMTM3-202ENST00000424011 STARD3NLO95772 234 aa20.18■□□□□ 0.82
CMTM3-202ENST00000424011 CHMP5Q9NZZ3 219 aa20.18■□□□□ 0.82
CMTM3-202ENST00000424011 A0A087WZG4 1122 aa20.17■□□□□ 0.82
CMTM3-202ENST00000424011 MARCH10Q8NA82 808 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-202ENST00000424011 RILPL2Q969X0 211 aa20.17■□□□□ 0.82
CMTM3-202ENST00000424011 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
CMTM3-202ENST00000424011 ARFGEF2Q9Y6D5 1785 aa20.16■□□□□ 0.82
CMTM3-202ENST00000424011 ASAP1Q9ULH1 1129 aa20.16■□□□□ 0.82
CMTM3-202ENST00000424011 HSP90AA1P07900 732 aaKnown RBP20.16■□□□□ 0.82
CMTM3-202ENST00000424011 BCL9O00512 1426 aa20.16■□□□□ 0.82
CMTM3-202ENST00000424011 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
CMTM3-202ENST00000424011 L1TD1Q5T7N2 865 aaKnown RBP20.15■□□□□ 0.82
CMTM3-202ENST00000424011 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
CMTM3-202ENST00000424011 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
CMTM3-202ENST00000424011 IFIT2P09913 472 aaKnown RBP20.15■□□□□ 0.82
CMTM3-202ENST00000424011 DDIT3P35638 169 aa20.15■□□□□ 0.82
CMTM3-202ENST00000424011 RABL6Q3YEC7 729 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-202ENST00000424011 TTLL7Q6ZT98 887 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms