RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SETDB2Q96T68 719 aa23.34■■□□□ 1.33
SBDSP1-202ENST00000423945 LAS1LQ9Y4W2 734 aaKnown RBP23.34■■□□□ 1.33
SBDSP1-202ENST00000423945 ERBB4Q15303 1308 aa23.33■■□□□ 1.33
SBDSP1-202ENST00000423945 ADCY9O60503 1353 aa23.33■■□□□ 1.33
SBDSP1-202ENST00000423945 ZNF853P0CG23 659 aa23.33■■□□□ 1.33
SBDSP1-202ENST00000423945 EIF2S2P20042 333 aaKnown RBP23.32■■□□□ 1.32
SBDSP1-202ENST00000423945 PROSER3Q2NL68 480 aa23.32■■□□□ 1.32
SBDSP1-202ENST00000423945 CFAP44Q96MT7 982 aa23.32■■□□□ 1.32
SBDSP1-202ENST00000423945 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
SBDSP1-202ENST00000423945 ANXA1P04083 346 aa23.31■■□□□ 1.32
SBDSP1-202ENST00000423945 DALRD3Q5D0E6 543 aaKnown RBP23.31■■□□□ 1.32
SBDSP1-202ENST00000423945 ZNF652Q9Y2D9 606 aa23.31■■□□□ 1.32
SBDSP1-202ENST00000423945 MAP3K15Q6ZN16 1313 aa23.31■■□□□ 1.32
SBDSP1-202ENST00000423945 C2CD5Q86YS7 1000 aa23.3■■□□□ 1.32
SBDSP1-202ENST00000423945 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
SBDSP1-202ENST00000423945 BRIP1Q9BX63 1249 aa23.3■■□□□ 1.32
SBDSP1-202ENST00000423945 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
SBDSP1-202ENST00000423945 SENP3-EIF4A1A0A087X0R7 540 aa23.29■■□□□ 1.32
SBDSP1-202ENST00000423945 ERVV-1B6SEH8 477 aa23.29■■□□□ 1.32
SBDSP1-202ENST00000423945 NECTIN2Q92692 538 aa23.29■■□□□ 1.32
SBDSP1-202ENST00000423945 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
SBDSP1-202ENST00000423945 ATP10DQ9P241 1426 aa23.28■■□□□ 1.32
SBDSP1-202ENST00000423945 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
SBDSP1-202ENST00000423945 H0YIN7 160 aa23.27■■□□□ 1.32
SBDSP1-202ENST00000423945 NBPF5PQ86XG9 351 aaPredicted RBP23.27■■□□□ 1.32
SBDSP1-202ENST00000423945 ZBTB3Q9H5J0 574 aa23.27■■□□□ 1.32
SBDSP1-202ENST00000423945 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
SBDSP1-202ENST00000423945 SBF1O95248 1867 aa23.26■■□□□ 1.31
SBDSP1-202ENST00000423945 KIF6Q6ZMV9 814 aa23.26■■□□□ 1.31
SBDSP1-202ENST00000423945 PDE6BP35913 854 aa23.25■■□□□ 1.31
SBDSP1-202ENST00000423945 CACNA1SQ13698 1873 aa23.25■■□□□ 1.31
SBDSP1-202ENST00000423945 UBN2Q6ZU65 1347 aa23.25■■□□□ 1.31
SBDSP1-202ENST00000423945 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
SBDSP1-202ENST00000423945 FAM177BA6PVY3 158 aa23.24■■□□□ 1.31
SBDSP1-202ENST00000423945 HOXB7P09629 217 aa23.24■■□□□ 1.31
SBDSP1-202ENST00000423945 ST5P78524 1137 aa23.24■■□□□ 1.31
SBDSP1-202ENST00000423945 GIGYF2Q6Y7W6 1299 aaKnown RBP23.24■■□□□ 1.31
SBDSP1-202ENST00000423945 TTLL6Q8N841 843 aa23.24■■□□□ 1.31
SBDSP1-202ENST00000423945 ARFGEF2Q9Y6D5 1785 aa23.24■■□□□ 1.31
SBDSP1-202ENST00000423945 ANKRD36CQ5JPF3 1778 aa23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 GNAI1P63096 354 aa23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 ZNF34Q8IZ26 560 aa23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 DDX21Q9NR30 783 aaKnown RBP eCLIP23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 SLX4Q8IY92 1834 aa23.23■■□□□ 1.31
SBDSP1-202ENST00000423945 SRGNP10124 158 aa23.22■■□□□ 1.31
SBDSP1-202ENST00000423945 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
SBDSP1-202ENST00000423945 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
SBDSP1-202ENST00000423945 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
SBDSP1-202ENST00000423945 CHPF2Q9P2E5 772 aa23.22■■□□□ 1.31
SBDSP1-202ENST00000423945 ABCC12Q96J65 1359 aa23.22■■□□□ 1.31
SBDSP1-202ENST00000423945 KLRG2A4D1S0 409 aaPredicted RBP23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 NPHP1O15259 732 aa23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 GPTP24298 496 aa23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 CALD1Q05682 793 aaKnown RBP23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 COPS6Q7L5N1 327 aa23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 XAGE3Q8WTP9 111 aa23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 ZNF622Q969S3 477 aaKnown RBP eCLIP23.21■■□□□ 1.31
SBDSP1-202ENST00000423945 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
SBDSP1-202ENST00000423945 IBTKQ9P2D0 1353 aaPredicted RBP23.19■■□□□ 1.3
SBDSP1-202ENST00000423945 PRELPP51888 382 aa23.19■■□□□ 1.3
SBDSP1-202ENST00000423945 AIMP1Q12904 312 aaKnown RBP23.19■■□□□ 1.3
SBDSP1-202ENST00000423945 SUSD4Q5VX71 490 aa23.19■■□□□ 1.3
SBDSP1-202ENST00000423945 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
SBDSP1-202ENST00000423945 FER1L6Q2WGJ9 1857 aa23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 CCDC88AQ3V6T2 1871 aa23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 RASSF7Q02833 373 aa23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 C9orf131Q5VYM1 1079 aa23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 STYK1Q6J9G0 422 aa23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
SBDSP1-202ENST00000423945 ELL2O00472 640 aaPredicted RBP23.17■■□□□ 1.3
SBDSP1-202ENST00000423945 NTSR2O95665 410 aa23.17■■□□□ 1.3
SBDSP1-202ENST00000423945 C1QTNF8P60827 252 aa23.17■■□□□ 1.3
SBDSP1-202ENST00000423945 ERFEQ4G0M1 354 aa23.17■■□□□ 1.3
SBDSP1-202ENST00000423945 MASTLQ96GX5 879 aa23.17■■□□□ 1.3
SBDSP1-202ENST00000423945 NFKBIEO00221 500 aa23.16■■□□□ 1.3
SBDSP1-202ENST00000423945 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
SBDSP1-202ENST00000423945 DBF4Q9UBU7 674 aaPredicted RBP23.16■■□□□ 1.3
SBDSP1-202ENST00000423945 RIC1Q4ADV7 1423 aa23.16■■□□□ 1.3
SBDSP1-202ENST00000423945 C21orf2O43822 256 aa23.15■■□□□ 1.3
SBDSP1-202ENST00000423945 TSPYL6Q8N831 410 aa23.15■■□□□ 1.3
SBDSP1-202ENST00000423945 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
SBDSP1-202ENST00000423945 NYXQ9GZU5 481 aa23.15■■□□□ 1.3
SBDSP1-202ENST00000423945 PRPF40BQ6NWY9 871 aaKnown RBP23.14■■□□□ 1.29
SBDSP1-202ENST00000423945 FAM9BQ8IZU0 186 aa23.14■■□□□ 1.29
SBDSP1-202ENST00000423945 CNKSR1Q969H4 720 aa23.14■■□□□ 1.29
SBDSP1-202ENST00000423945 ZNF219Q9P2Y4 722 aaPredicted RBP23.14■■□□□ 1.29
SBDSP1-202ENST00000423945 NPR1P16066 1061 aa23.13■■□□□ 1.29
SBDSP1-202ENST00000423945 GTF2E1P29083 439 aaPredicted RBP23.13■■□□□ 1.29
SBDSP1-202ENST00000423945 CRY2Q49AN0 593 aa23.13■■□□□ 1.29
SBDSP1-202ENST00000423945 PARP10Q53GL7 1025 aa23.13■■□□□ 1.29
SBDSP1-202ENST00000423945 RNF181Q9P0P0 153 aa23.13■■□□□ 1.29
SBDSP1-202ENST00000423945 TCIRG1Q13488 830 aa23.12■■□□□ 1.29
SBDSP1-202ENST00000423945 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
SBDSP1-202ENST00000423945 GPBP1L1Q9HC44 474 aaPredicted RBP23.12■■□□□ 1.29
SBDSP1-202ENST00000423945 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
SBDSP1-202ENST00000423945 IL16Q14005 1332 aa23.11■■□□□ 1.29
SBDSP1-202ENST00000423945 C3orf67Q6ZVT6 689 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms