RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 HLFQ16534 295 aa19.98■□□□□ 0.79
USB1-202ENST00000423271 NGEFQ8N5V2 710 aa19.98■□□□□ 0.79
USB1-202ENST00000423271 RNF181Q9P0P0 153 aa19.98■□□□□ 0.79
USB1-202ENST00000423271 KIF3CO14782 793 aa19.97■□□□□ 0.79
USB1-202ENST00000423271 NPHP1O15259 732 aa19.97■□□□□ 0.79
USB1-202ENST00000423271 ST5P78524 1137 aa19.97■□□□□ 0.79
USB1-202ENST00000423271 NEUROD2Q15784 382 aa19.97■□□□□ 0.79
USB1-202ENST00000423271 ZNF622Q969S3 477 aaKnown RBP eCLIP19.97■□□□□ 0.79
USB1-202ENST00000423271 LMOD3Q0VAK6 560 aa19.96■□□□□ 0.79
USB1-202ENST00000423271 NBPF5PQ86XG9 351 aaPredicted RBP19.96■□□□□ 0.79
USB1-202ENST00000423271 ADAMTS8Q9UP79 889 aa19.96■□□□□ 0.79
USB1-202ENST00000423271 NIP7Q9Y221 180 aaKnown RBP eCLIP19.96■□□□□ 0.79
USB1-202ENST00000423271 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
USB1-202ENST00000423271 RGL2O15211 777 aa19.95■□□□□ 0.78
USB1-202ENST00000423271 MYL6BP14649 208 aa19.95■□□□□ 0.78
USB1-202ENST00000423271 PRELPP51888 382 aa19.95■□□□□ 0.78
USB1-202ENST00000423271 TTLL7Q6ZT98 887 aa19.95■□□□□ 0.78
USB1-202ENST00000423271 RUNDC1Q96C34 613 aa19.95■□□□□ 0.78
USB1-202ENST00000423271 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
USB1-202ENST00000423271 ZNF219Q9P2Y4 722 aaPredicted RBP19.94■□□□□ 0.78
USB1-202ENST00000423271 PDZRN3Q9UPQ7 1066 aa19.94■□□□□ 0.78
USB1-202ENST00000423271 NUP98P52948 1817 aa19.94■□□□□ 0.78
USB1-202ENST00000423271 SLX4Q8IY92 1834 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 CEP350Q5VT06 3117 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 NFKBIEO00221 500 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 TRIM35Q9UPQ4 493 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 MAP3K15Q6ZN16 1313 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 ARFGEF2Q9Y6D5 1785 aa19.93■□□□□ 0.78
USB1-202ENST00000423271 SRGNP10124 158 aa19.92■□□□□ 0.78
USB1-202ENST00000423271 BABAM1Q9NWV8 329 aa19.92■□□□□ 0.78
USB1-202ENST00000423271 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
USB1-202ENST00000423271 C21orf2O43822 256 aa19.91■□□□□ 0.78
USB1-202ENST00000423271 EIF2S2P20042 333 aaKnown RBP19.91■□□□□ 0.78
USB1-202ENST00000423271 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
USB1-202ENST00000423271 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
USB1-202ENST00000423271 ERBB4Q15303 1308 aa19.91■□□□□ 0.78
USB1-202ENST00000423271 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
USB1-202ENST00000423271 TIAM2Q8IVF5 1701 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 FER1L6Q2WGJ9 1857 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 ERVV-1B6SEH8 477 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 LMNB1P20700 586 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 KRT24Q2M2I5 525 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 PROSER3Q2NL68 480 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 STYK1Q6J9G0 422 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 TPTE2Q6XPS3 522 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 LRP10Q7Z4F1 713 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 MASTLQ96GX5 879 aa19.9■□□□□ 0.78
USB1-202ENST00000423271 ANXA1P04083 346 aa19.89■□□□□ 0.77
USB1-202ENST00000423271 PDIA6Q15084 440 aa19.89■□□□□ 0.77
USB1-202ENST00000423271 PRPF40BQ6NWY9 871 aaKnown RBP19.89■□□□□ 0.77
USB1-202ENST00000423271 CNKSR1Q969H4 720 aa19.89■□□□□ 0.77
USB1-202ENST00000423271 ABCC12Q96J65 1359 aa19.89■□□□□ 0.77
USB1-202ENST00000423271 UBN2Q6ZU65 1347 aa19.88■□□□□ 0.77
USB1-202ENST00000423271 CHL1O00533 1208 aa19.88■□□□□ 0.77
USB1-202ENST00000423271 NECTIN2Q92692 538 aa19.88■□□□□ 0.77
USB1-202ENST00000423271 LAS1LQ9Y4W2 734 aaKnown RBP19.88■□□□□ 0.77
USB1-202ENST00000423271 KLRG2A4D1S0 409 aaPredicted RBP19.87■□□□□ 0.77
USB1-202ENST00000423271 GPTP24298 496 aa19.87■□□□□ 0.77
USB1-202ENST00000423271 NUTM1Q86Y26 1132 aa19.87■□□□□ 0.77
USB1-202ENST00000423271 KDM2BQ8NHM5 1336 aa19.85■□□□□ 0.77
USB1-202ENST00000423271 ZC3H4Q9UPT8 1303 aaKnown RBP19.85■□□□□ 0.77
USB1-202ENST00000423271 NPR1P16066 1061 aa19.85■□□□□ 0.77
USB1-202ENST00000423271 GTF2E1P29083 439 aaPredicted RBP19.85■□□□□ 0.77
USB1-202ENST00000423271 IBTKQ9P2D0 1353 aaPredicted RBP19.84■□□□□ 0.77
USB1-202ENST00000423271 APAF1O14727 1248 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 TOMM70O94826 608 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 HSPA6P17066 643 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 ERFEQ4G0M1 354 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
USB1-202ENST00000423271 ZNF34Q8IZ26 560 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 NYXQ9GZU5 481 aa19.84■□□□□ 0.77
USB1-202ENST00000423271 DICER1Q9UPY3 1922 aaKnown RBP19.84■□□□□ 0.77
USB1-202ENST00000423271 SUSD4Q5VX71 490 aa19.83■□□□□ 0.77
USB1-202ENST00000423271 C7orf43Q8WVR3 580 aa19.83■□□□□ 0.77
USB1-202ENST00000423271 TAOK3Q9H2K8 898 aa19.83■□□□□ 0.77
USB1-202ENST00000423271 RRAGCQ9HB90 399 aa19.83■□□□□ 0.77
USB1-202ENST00000423271 LTBP3Q9NS15 1303 aa19.82■□□□□ 0.76
USB1-202ENST00000423271 OLFM4Q6UX06 510 aa19.82■□□□□ 0.76
USB1-202ENST00000423271 ANKRD36CQ5JPF3 1778 aa19.81■□□□□ 0.76
USB1-202ENST00000423271 NTSR2O95665 410 aa19.81■□□□□ 0.76
USB1-202ENST00000423271 SOGA3Q5TF21 947 aa19.81■□□□□ 0.76
USB1-202ENST00000423271 COPS6Q7L5N1 327 aa19.81■□□□□ 0.76
USB1-202ENST00000423271 XAGE3Q8WTP9 111 aa19.81■□□□□ 0.76
USB1-202ENST00000423271 RIC1Q4ADV7 1423 aa19.81■□□□□ 0.76
USB1-202ENST00000423271 GLTPD2A6NH11 291 aa19.8■□□□□ 0.76
USB1-202ENST00000423271 AIMP1Q12904 312 aaKnown RBP19.8■□□□□ 0.76
USB1-202ENST00000423271 CRY2Q49AN0 593 aa19.8■□□□□ 0.76
USB1-202ENST00000423271 CCDC93Q567U6 631 aa19.8■□□□□ 0.76
USB1-202ENST00000423271 CFAP44Q96MT7 982 aa19.8■□□□□ 0.76
USB1-202ENST00000423271 DDX21Q9NR30 783 aaKnown RBP eCLIP19.8■□□□□ 0.76
USB1-202ENST00000423271 MBIPQ9NS73 344 aa19.8■□□□□ 0.76
USB1-202ENST00000423271 CHPF2Q9P2E5 772 aa19.8■□□□□ 0.76
USB1-202ENST00000423271 HDGFL1Q5TGJ6 251 aa19.79■□□□□ 0.76
USB1-202ENST00000423271 C3orf67Q6ZVT6 689 aa19.79■□□□□ 0.76
USB1-202ENST00000423271 C16orf71Q8IYS4 520 aaPredicted RBP19.79■□□□□ 0.76
USB1-202ENST00000423271 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
USB1-202ENST00000423271 RBM46Q8TBY0 533 aaKnown RBP19.78■□□□□ 0.76
USB1-202ENST00000423271 HOXB7P09629 217 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms