RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 C21orf2O43822 256 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 RASSF7Q02833 373 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 HLFQ16534 295 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 RUNDC1Q96C34 613 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 PDZRN3Q9UPQ7 1066 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
NUP50-206ENST00000422489 KIF6Q6ZMV9 814 aa12.18□□□□□ -0.46
NUP50-206ENST00000422489 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
NUP50-206ENST00000422489 PRKRIP1Q9H875 184 aaPredicted RBP12.18□□□□□ -0.46
NUP50-206ENST00000422489 KIF3CO14782 793 aa12.17□□□□□ -0.46
NUP50-206ENST00000422489 ZEB1P37275 1124 aaPredicted RBP12.17□□□□□ -0.46
NUP50-206ENST00000422489 TTLL7Q6ZT98 887 aa12.17□□□□□ -0.46
NUP50-206ENST00000422489 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
NUP50-206ENST00000422489 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
NUP50-206ENST00000422489 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
NUP50-206ENST00000422489 NMRK2Q9NPI5 230 aa12.17□□□□□ -0.46
NUP50-206ENST00000422489 UTRNP46939 3433 aa12.16□□□□□ -0.46
NUP50-206ENST00000422489 LMNB1P20700 586 aa12.16□□□□□ -0.46
NUP50-206ENST00000422489 STYK1Q6J9G0 422 aa12.16□□□□□ -0.46
NUP50-206ENST00000422489 C16orf71Q8IYS4 520 aaPredicted RBP12.16□□□□□ -0.46
NUP50-206ENST00000422489 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
NUP50-206ENST00000422489 RRAGCQ9HB90 399 aa12.16□□□□□ -0.46
NUP50-206ENST00000422489 KIF13BQ9NQT8 1826 aa12.16□□□□□ -0.46
NUP50-206ENST00000422489 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
NUP50-206ENST00000422489 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
NUP50-206ENST00000422489 KIAA1551Q9HCM1 1747 aa12.15□□□□□ -0.46
NUP50-206ENST00000422489 ERVV-1B6SEH8 477 aa12.15□□□□□ -0.46
NUP50-206ENST00000422489 SRGNP10124 158 aa12.15□□□□□ -0.46
NUP50-206ENST00000422489 GPTP24298 496 aa12.15□□□□□ -0.46
NUP50-206ENST00000422489 BABAM1Q9NWV8 329 aa12.15□□□□□ -0.46
NUP50-206ENST00000422489 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
NUP50-206ENST00000422489 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
NUP50-206ENST00000422489 NFKBIEO00221 500 aa12.14□□□□□ -0.47
NUP50-206ENST00000422489 ANXA1P04083 346 aa12.14□□□□□ -0.47
NUP50-206ENST00000422489 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
NUP50-206ENST00000422489 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
NUP50-206ENST00000422489 CHL1O00533 1208 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 RGL2O15211 777 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 TOMM70O94826 608 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 NPR1P16066 1061 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 PRELPP51888 382 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
NUP50-206ENST00000422489 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
NUP50-206ENST00000422489 APAF1O14727 1248 aa12.12□□□□□ -0.47
NUP50-206ENST00000422489 HSPA6P17066 643 aa12.12□□□□□ -0.47
NUP50-206ENST00000422489 PDIA6Q15084 440 aa12.12□□□□□ -0.47
NUP50-206ENST00000422489 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
NUP50-206ENST00000422489 SUSD4Q5VX71 490 aa12.12□□□□□ -0.47
NUP50-206ENST00000422489 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
NUP50-206ENST00000422489 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
NUP50-206ENST00000422489 PROSER3Q2NL68 480 aa12.11□□□□□ -0.47
NUP50-206ENST00000422489 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
NUP50-206ENST00000422489 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
NUP50-206ENST00000422489 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
NUP50-206ENST00000422489 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
NUP50-206ENST00000422489 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
NUP50-206ENST00000422489 GLTPD2A6NH11 291 aa12.1□□□□□ -0.47
NUP50-206ENST00000422489 PPP1R42Q7Z4L9 355 aa12.1□□□□□ -0.47
NUP50-206ENST00000422489 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
NUP50-206ENST00000422489 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
NUP50-206ENST00000422489 TAOK3Q9H2K8 898 aa12.1□□□□□ -0.47
NUP50-206ENST00000422489 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
NUP50-206ENST00000422489 AFDNP55196 1824 aaKnown RBP12.09□□□□□ -0.47
NUP50-206ENST00000422489 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
NUP50-206ENST00000422489 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
NUP50-206ENST00000422489 TCERG1O14776 1098 aaKnown RBP12.09□□□□□ -0.47
NUP50-206ENST00000422489 C1QBPQ07021 282 aaKnown RBP12.09□□□□□ -0.47
NUP50-206ENST00000422489 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
NUP50-206ENST00000422489 HDGFL1Q5TGJ6 251 aa12.09□□□□□ -0.47
NUP50-206ENST00000422489 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
NUP50-206ENST00000422489 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
NUP50-206ENST00000422489 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
NUP50-206ENST00000422489 SCN7AQ01118 1682 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
NUP50-206ENST00000422489 VEGFAP15692 232 aaPredicted RBP12.08□□□□□ -0.48
NUP50-206ENST00000422489 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
NUP50-206ENST00000422489 C7orf43Q8WVR3 580 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
NUP50-206ENST00000422489 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 UBN2Q6ZU65 1347 aa12.08□□□□□ -0.48
NUP50-206ENST00000422489 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
NUP50-206ENST00000422489 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
NUP50-206ENST00000422489 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
NUP50-206ENST00000422489 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
NUP50-206ENST00000422489 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
NUP50-206ENST00000422489 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
NUP50-206ENST00000422489 NLRP3Q96P20 1036 aa12.07□□□□□ -0.48
NUP50-206ENST00000422489 ZNF277Q9NRM2 450 aaPredicted RBP12.07□□□□□ -0.48
NUP50-206ENST00000422489 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
NUP50-206ENST00000422489 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
NUP50-206ENST00000422489 ANP32CO43423 234 aa12.06□□□□□ -0.48
NUP50-206ENST00000422489 DDNO94850 711 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms