RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ZBTB22O15209 634 aa12.48□□□□□ -0.41
NUP50-205ENST00000419387 PDE6BP35913 854 aa12.48□□□□□ -0.41
NUP50-205ENST00000419387 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
NUP50-205ENST00000419387 DDX10Q13206 875 aaKnown RBP12.48□□□□□ -0.41
NUP50-205ENST00000419387 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
NUP50-205ENST00000419387 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
NUP50-205ENST00000419387 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
NUP50-205ENST00000419387 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
NUP50-205ENST00000419387 CARMIL3Q8ND23 1372 aa12.47□□□□□ -0.41
NUP50-205ENST00000419387 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
NUP50-205ENST00000419387 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
NUP50-205ENST00000419387 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
NUP50-205ENST00000419387 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
NUP50-205ENST00000419387 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
NUP50-205ENST00000419387 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
NUP50-205ENST00000419387 NPHP1O15259 732 aa12.46□□□□□ -0.41
NUP50-205ENST00000419387 CNBD1Q8NA66 436 aa12.46□□□□□ -0.41
NUP50-205ENST00000419387 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
NUP50-205ENST00000419387 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
NUP50-205ENST00000419387 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
NUP50-205ENST00000419387 RGL2O15211 777 aa12.45□□□□□ -0.42
NUP50-205ENST00000419387 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
NUP50-205ENST00000419387 ST5P78524 1137 aa12.45□□□□□ -0.42
NUP50-205ENST00000419387 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
NUP50-205ENST00000419387 HSPA6P17066 643 aa12.44□□□□□ -0.42
NUP50-205ENST00000419387 RIPK4P57078 832 aa12.44□□□□□ -0.42
NUP50-205ENST00000419387 RASSF7Q02833 373 aa12.44□□□□□ -0.42
NUP50-205ENST00000419387 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
NUP50-205ENST00000419387 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
NUP50-205ENST00000419387 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
NUP50-205ENST00000419387 TOMM70O94826 608 aa12.43□□□□□ -0.42
NUP50-205ENST00000419387 LMNB1P20700 586 aa12.43□□□□□ -0.42
NUP50-205ENST00000419387 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
NUP50-205ENST00000419387 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
NUP50-205ENST00000419387 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 SRGNP10124 158 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
NUP50-205ENST00000419387 PRELPP51888 382 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 HLFQ16534 295 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
NUP50-205ENST00000419387 ANKRD31Q8N7Z5 1873 aa12.42□□□□□ -0.42
NUP50-205ENST00000419387 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
NUP50-205ENST00000419387 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 NFKBIEO00221 500 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 C21orf2O43822 256 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 SBF1O95248 1867 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
NUP50-205ENST00000419387 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
NUP50-205ENST00000419387 KLRG2A4D1S0 409 aaPredicted RBP12.4□□□□□ -0.42
NUP50-205ENST00000419387 MYL6BP14649 208 aa12.4□□□□□ -0.42
NUP50-205ENST00000419387 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
NUP50-205ENST00000419387 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.42
NUP50-205ENST00000419387 BABAM1Q9NWV8 329 aa12.4□□□□□ -0.42
NUP50-205ENST00000419387 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
NUP50-205ENST00000419387 GLTPD2A6NH11 291 aa12.39□□□□□ -0.43
NUP50-205ENST00000419387 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
NUP50-205ENST00000419387 NPR1P16066 1061 aa12.39□□□□□ -0.43
NUP50-205ENST00000419387 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
NUP50-205ENST00000419387 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
NUP50-205ENST00000419387 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
NUP50-205ENST00000419387 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 GTF2E1P29083 439 aaPredicted RBP12.38□□□□□ -0.43
NUP50-205ENST00000419387 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUP50-205ENST00000419387 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
NUP50-205ENST00000419387 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
NUP50-205ENST00000419387 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
NUP50-205ENST00000419387 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
NUP50-205ENST00000419387 APLP1P51693 650 aa12.37□□□□□ -0.43
NUP50-205ENST00000419387 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
NUP50-205ENST00000419387 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
NUP50-205ENST00000419387 PRKRIP1Q9H875 184 aaPredicted RBP12.37□□□□□ -0.43
NUP50-205ENST00000419387 ADAMTS8Q9UP79 889 aa12.37□□□□□ -0.43
NUP50-205ENST00000419387 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
NUP50-205ENST00000419387 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 FSTL1Q12841 308 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 PDIA6Q15084 440 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 TAOK3Q9H2K8 898 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
NUP50-205ENST00000419387 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
NUP50-205ENST00000419387 CHL1O00533 1208 aa12.35□□□□□ -0.43
NUP50-205ENST00000419387 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
NUP50-205ENST00000419387 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms