RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
SSBP3-205ENST00000417664 APBB1O00213 710 aa20.73■□□□□ 0.91
SSBP3-205ENST00000417664 KIF1BPQ96EK5 621 aa20.73■□□□□ 0.91
SSBP3-205ENST00000417664 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
SSBP3-205ENST00000417664 ARFGEF2Q9Y6D5 1785 aa20.73■□□□□ 0.91
SSBP3-205ENST00000417664 CDC45O75419 566 aa20.73■□□□□ 0.91
SSBP3-205ENST00000417664 SURF6O75683 361 aaKnown RBP20.73■□□□□ 0.91
SSBP3-205ENST00000417664 SALL3Q9BXA9 1300 aa20.72■□□□□ 0.91
SSBP3-205ENST00000417664 A1BGP04217 495 aa20.72■□□□□ 0.91
SSBP3-205ENST00000417664 GSPT1P15170 499 aaKnown RBP20.72■□□□□ 0.91
SSBP3-205ENST00000417664 PDE1AP54750 535 aa20.72■□□□□ 0.91
SSBP3-205ENST00000417664 AOX1Q06278 1338 aa20.71■□□□□ 0.91
SSBP3-205ENST00000417664 STAP2Q9UGK3 403 aa20.71■□□□□ 0.91
SSBP3-205ENST00000417664 PIP4K2AP48426 406 aaPredicted RBP20.7■□□□□ 0.91
SSBP3-205ENST00000417664 ERC1Q8IUD2 1116 aa20.7■□□□□ 0.91
SSBP3-205ENST00000417664 SUCLG2Q96I99 432 aa20.7■□□□□ 0.91
SSBP3-205ENST00000417664 VPS72Q15906 364 aa20.7■□□□□ 0.9
SSBP3-205ENST00000417664 CERKQ8TCT0 537 aa20.7■□□□□ 0.9
SSBP3-205ENST00000417664 RHPN1Q8TCX5 695 aa20.7■□□□□ 0.9
SSBP3-205ENST00000417664 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
SSBP3-205ENST00000417664 CCDC9Q9Y3X0 531 aaKnown RBP20.7■□□□□ 0.9
SSBP3-205ENST00000417664 MX1P20591 662 aa20.69■□□□□ 0.9
SSBP3-205ENST00000417664 TBC1D9Q6ZT07 1266 aa20.69■□□□□ 0.9
SSBP3-205ENST00000417664 FNBP4Q8N3X1 1017 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-205ENST00000417664 MFAP1P55081 439 aaKnown RBP20.68■□□□□ 0.9
SSBP3-205ENST00000417664 CASC1Q6TDU7 716 aa20.68■□□□□ 0.9
SSBP3-205ENST00000417664 KAZALD1Q96I82 304 aa20.68■□□□□ 0.9
SSBP3-205ENST00000417664 NGLY1Q96IV0 654 aa20.68■□□□□ 0.9
SSBP3-205ENST00000417664 C22orf23Q9BZE7 217 aa20.68■□□□□ 0.9
SSBP3-205ENST00000417664 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
SSBP3-205ENST00000417664 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
SSBP3-205ENST00000417664 PRIM1P49642 420 aaKnown RBP20.67■□□□□ 0.9
SSBP3-205ENST00000417664 DNAJC10Q8IXB1 793 aa20.67■□□□□ 0.9
SSBP3-205ENST00000417664 RBM42Q9BTD8 480 aaKnown RBP20.67■□□□□ 0.9
SSBP3-205ENST00000417664 DAXXQ9UER7 740 aaPredicted RBP20.67■□□□□ 0.9
SSBP3-205ENST00000417664 DOT1LQ8TEK3 1739 aa20.67■□□□□ 0.9
SSBP3-205ENST00000417664 BCL9LQ86UU0 1499 aa20.67■□□□□ 0.9
SSBP3-205ENST00000417664 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
SSBP3-205ENST00000417664 TTLL7Q6ZT98 887 aa20.67■□□□□ 0.9
SSBP3-205ENST00000417664 CCDC191Q8NCU4 936 aa20.67■□□□□ 0.9
SSBP3-205ENST00000417664 AFDNP55196 1824 aaKnown RBP20.67■□□□□ 0.9
SSBP3-205ENST00000417664 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
SSBP3-205ENST00000417664 A0A087WZG4 1122 aa20.65■□□□□ 0.9
SSBP3-205ENST00000417664 SDSP20132 328 aa20.65■□□□□ 0.9
SSBP3-205ENST00000417664 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
SSBP3-205ENST00000417664 RABL6Q3YEC7 729 aaPredicted RBP20.65■□□□□ 0.9
SSBP3-205ENST00000417664 MARCH10Q8NA82 808 aaPredicted RBP20.65■□□□□ 0.9
SSBP3-205ENST00000417664 C8orf37Q96NL8 207 aa20.65■□□□□ 0.9
SSBP3-205ENST00000417664 CWC25Q9NXE8 425 aaPredicted RBP20.65■□□□□ 0.9
SSBP3-205ENST00000417664 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.9
SSBP3-205ENST00000417664 OS9Q13438 667 aaPredicted RBP20.64■□□□□ 0.9
SSBP3-205ENST00000417664 H7C1W4 665 aa20.64■□□□□ 0.89
SSBP3-205ENST00000417664 CYP19A1P11511 503 aaPredicted RBP20.64■□□□□ 0.89
SSBP3-205ENST00000417664 BECN1Q14457 450 aa20.64■□□□□ 0.89
SSBP3-205ENST00000417664 KIF6Q6ZMV9 814 aa20.64■□□□□ 0.89
SSBP3-205ENST00000417664 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.63■□□□□ 0.89
SSBP3-205ENST00000417664 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
SSBP3-205ENST00000417664 CASP7P55210 303 aa20.63■□□□□ 0.89
SSBP3-205ENST00000417664 CLASRPQ8N2M8 674 aaKnown RBP20.63■□□□□ 0.89
SSBP3-205ENST00000417664 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
SSBP3-205ENST00000417664 G3BP1Q13283 466 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSBP3-205ENST00000417664 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
SSBP3-205ENST00000417664 BCL11AQ9H165 835 aa20.62■□□□□ 0.89
SSBP3-205ENST00000417664 IL1RAPL2Q9NP60 686 aa20.62■□□□□ 0.89
SSBP3-205ENST00000417664 USP42Q9H9J4 1324 aaKnown RBP20.62■□□□□ 0.89
SSBP3-205ENST00000417664 TCIRG1Q13488 830 aa20.61■□□□□ 0.89
SSBP3-205ENST00000417664 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
SSBP3-205ENST00000417664 SLC4A9Q96Q91 983 aa20.61■□□□□ 0.89
SSBP3-205ENST00000417664 ISCA1Q9BUE6 129 aa20.61■□□□□ 0.89
SSBP3-205ENST00000417664 ZBTB3Q9H5J0 574 aa20.61■□□□□ 0.89
SSBP3-205ENST00000417664 COPRSQ9NQ92 184 aa20.61■□□□□ 0.89
SSBP3-205ENST00000417664 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
SSBP3-205ENST00000417664 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-205ENST00000417664 IL6STP40189 918 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-205ENST00000417664 HSP90AB3PQ58FF7 597 aa20.6■□□□□ 0.89
SSBP3-205ENST00000417664 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
SSBP3-205ENST00000417664 FAM98CQ17RN3 349 aaKnown RBP20.58■□□□□ 0.89
SSBP3-205ENST00000417664 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.89
SSBP3-205ENST00000417664 GPATCH3Q96I76 525 aa20.58■□□□□ 0.89
SSBP3-205ENST00000417664 USP21Q9UK80 565 aa20.58■□□□□ 0.89
SSBP3-205ENST00000417664 PA2G4Q9UQ80 394 aaKnown RBP20.58■□□□□ 0.89
SSBP3-205ENST00000417664 TJP1Q07157 1748 aa20.58■□□□□ 0.89
SSBP3-205ENST00000417664 TUBGCP6Q96RT7 1819 aa20.58■□□□□ 0.89
SSBP3-205ENST00000417664 ERC2O15083 957 aa20.58■□□□□ 0.88
SSBP3-205ENST00000417664 GIGYF2Q6Y7W6 1299 aaKnown RBP20.58■□□□□ 0.88
SSBP3-205ENST00000417664 ERVV-1B6SEH8 477 aa20.57■□□□□ 0.88
SSBP3-205ENST00000417664 REC8O95072 547 aa20.57■□□□□ 0.88
SSBP3-205ENST00000417664 GLRX3O76003 335 aaKnown RBP20.56■□□□□ 0.88
SSBP3-205ENST00000417664 RFX5P48382 616 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-205ENST00000417664 NUTM1Q86Y26 1132 aa20.56■□□□□ 0.88
SSBP3-205ENST00000417664 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
SSBP3-205ENST00000417664 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
SSBP3-205ENST00000417664 SIK1P57059 783 aa20.55■□□□□ 0.88
SSBP3-205ENST00000417664 PI4K2BQ8TCG2 481 aa20.55■□□□□ 0.88
SSBP3-205ENST00000417664 ACSBG1Q96GR2 724 aa20.55■□□□□ 0.88
SSBP3-205ENST00000417664 ZBTB1Q9Y2K1 713 aa20.55■□□□□ 0.88
SSBP3-205ENST00000417664 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
SSBP3-205ENST00000417664 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
SSBP3-205ENST00000417664 SASH1O94885 1247 aa20.54■□□□□ 0.88
SSBP3-205ENST00000417664 FOXO4P98177 505 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms