RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 CHRNA5P30532 468 aa9.37□□□□□ -0.91
COPS3-202ENST00000417352 TEFQ10587 303 aa9.37□□□□□ -0.91
COPS3-202ENST00000417352 DALRD3Q5D0E6 543 aaKnown RBP9.37□□□□□ -0.91
COPS3-202ENST00000417352 MARVELD3Q96A59 401 aa9.37□□□□□ -0.91
COPS3-202ENST00000417352 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
COPS3-202ENST00000417352 SCN11AQ9UI33 1791 aa9.37□□□□□ -0.91
COPS3-202ENST00000417352 COL5A3P25940 1745 aaPredicted RBP9.36□□□□□ -0.91
COPS3-202ENST00000417352 VIRMAQ69YN4 1812 aaKnown RBP9.36□□□□□ -0.91
COPS3-202ENST00000417352 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
COPS3-202ENST00000417352 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
COPS3-202ENST00000417352 C16orf71Q8IYS4 520 aaPredicted RBP9.36□□□□□ -0.91
COPS3-202ENST00000417352 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
COPS3-202ENST00000417352 C4AP0C0L4 1744 aa9.36□□□□□ -0.91
COPS3-202ENST00000417352 PLEKHG2Q9H7P9 1386 aa9.36□□□□□ -0.91
COPS3-202ENST00000417352 USP42Q9H9J4 1324 aaKnown RBP9.35□□□□□ -0.91
COPS3-202ENST00000417352 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
COPS3-202ENST00000417352 STARD3NLO95772 234 aa9.35□□□□□ -0.91
COPS3-202ENST00000417352 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
COPS3-202ENST00000417352 PER1O15534 1290 aaPredicted RBP9.34□□□□□ -0.91
COPS3-202ENST00000417352 CYP19A1P11511 503 aaPredicted RBP9.34□□□□□ -0.91
COPS3-202ENST00000417352 DDR1Q08345 913 aa9.34□□□□□ -0.91
COPS3-202ENST00000417352 C9orf131Q5VYM1 1079 aa9.34□□□□□ -0.91
COPS3-202ENST00000417352 RNF181Q9P0P0 153 aa9.34□□□□□ -0.91
COPS3-202ENST00000417352 ZNF831Q5JPB2 1677 aa9.33□□□□□ -0.92
COPS3-202ENST00000417352 POLRMTO00411 1230 aaKnown RBP9.33□□□□□ -0.92
COPS3-202ENST00000417352 U2AF1L5P0DN76 240 aaPredicted RBP9.33□□□□□ -0.92
COPS3-202ENST00000417352 HSPA6P17066 643 aa9.33□□□□□ -0.92
COPS3-202ENST00000417352 U2AF1Q01081 240 aaKnown RBP eCLIP9.33□□□□□ -0.92
COPS3-202ENST00000417352 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
COPS3-202ENST00000417352 NUDCQ9Y266 331 aa9.33□□□□□ -0.92
COPS3-202ENST00000417352 ZBTB1Q9Y2K1 713 aa9.33□□□□□ -0.92
COPS3-202ENST00000417352 TJP1Q07157 1748 aa9.33□□□□□ -0.92
COPS3-202ENST00000417352 C10orf71Q711Q0 1435 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 BTBD11A6QL63 1104 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 G3V3G9 751 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 SERPINB2P05120 415 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 KCNA3P22001 575 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 PRKAR2BP31323 418 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 NFIXQ14938 502 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 C2CD5Q86YS7 1000 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
COPS3-202ENST00000417352 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.92
COPS3-202ENST00000417352 NMRK2Q9NPI5 230 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 NARFQ9UHQ1 456 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 TBC1D2BQ9UPU7 963 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 KIF13BQ9NQT8 1826 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 COL15A1P39059 1388 aa9.32□□□□□ -0.92
COPS3-202ENST00000417352 SOS1Q07889 1333 aaPredicted RBP9.31□□□□□ -0.92
COPS3-202ENST00000417352 A0A087WZG4 1122 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 H0YIN7 160 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 TM4SF1P30408 202 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 ZNF790Q6PG37 636 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 IL17REQ8NFR9 667 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
COPS3-202ENST00000417352 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
COPS3-202ENST00000417352 ADCY9O60503 1353 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 KIF3CO14782 793 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 TOMM70O94826 608 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 A1BGP04217 495 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 NEFMP07197 916 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
COPS3-202ENST00000417352 TTLL6Q8N841 843 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 PHACTR3Q96KR7 559 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 FMNL2Q96PY5 1086 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 TEX13AQ9BXU3 409 aaPredicted RBP9.3□□□□□ -0.92
COPS3-202ENST00000417352 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
COPS3-202ENST00000417352 KIAA1551Q9HCM1 1747 aa9.29□□□□□ -0.92
COPS3-202ENST00000417352 EMP3P54852 163 aa9.29□□□□□ -0.92
COPS3-202ENST00000417352 RASSF7Q02833 373 aa9.29□□□□□ -0.92
COPS3-202ENST00000417352 TBC1D9BQ66K14 1250 aa9.29□□□□□ -0.92
COPS3-202ENST00000417352 MCM10Q7L590 875 aa9.29□□□□□ -0.92
COPS3-202ENST00000417352 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
COPS3-202ENST00000417352 KCPQ6ZWJ8 1503 aa9.28□□□□□ -0.92
COPS3-202ENST00000417352 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
COPS3-202ENST00000417352 KCNQ3O43525 872 aa9.28□□□□□ -0.92
COPS3-202ENST00000417352 APLP1P51693 650 aa9.28□□□□□ -0.92
COPS3-202ENST00000417352 NGEFQ8N5V2 710 aa9.28□□□□□ -0.92
COPS3-202ENST00000417352 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
COPS3-202ENST00000417352 ARFGEF1Q9Y6D6 1849 aa9.28□□□□□ -0.92
COPS3-202ENST00000417352 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
COPS3-202ENST00000417352 HEG1Q9ULI3 1381 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 C21orf2O43822 256 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 PPP2R1AP30153 589 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 PDE6BP35913 854 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 EIF5P55010 431 aaKnown RBP9.27□□□□□ -0.93
COPS3-202ENST00000417352 ST5P78524 1137 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 DCTN1Q14203 1278 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 DZIP3Q86Y13 1208 aaKnown RBP9.27□□□□□ -0.93
COPS3-202ENST00000417352 SPNS2Q8IVW8 549 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
COPS3-202ENST00000417352 CCDC88AQ3V6T2 1871 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 LMNB1P20700 586 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
COPS3-202ENST00000417352 HTRA3P83110 453 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 NBPF5PQ86XG9 351 aaPredicted RBP9.26□□□□□ -0.93
COPS3-202ENST00000417352 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms