RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 NECTIN2Q92692 538 aa34.42■■■■□ 3.1
VEGFA-207ENST00000413642 PDIA6Q15084 440 aa34.41■■■■□ 3.1
VEGFA-207ENST00000413642 BRIP1Q9BX63 1249 aa34.41■■■■□ 3.1
VEGFA-207ENST00000413642 NIP7Q9Y221 180 aaKnown RBP eCLIP34.41■■■■□ 3.1
VEGFA-207ENST00000413642 ATP10DQ9P241 1426 aa34.4■■■■□ 3.1
VEGFA-207ENST00000413642 BRCA1P38398 1863 aaKnown RBP34.4■■■■□ 3.1
VEGFA-207ENST00000413642 H0YIN7 160 aa34.4■■■■□ 3.1
VEGFA-207ENST00000413642 ANXA1P04083 346 aa34.4■■■■□ 3.1
VEGFA-207ENST00000413642 PROSER3Q2NL68 480 aa34.4■■■■□ 3.1
VEGFA-207ENST00000413642 FAM177BA6PVY3 158 aa34.39■■■■□ 3.1
VEGFA-207ENST00000413642 NPHP1O15259 732 aa34.39■■■■□ 3.1
VEGFA-207ENST00000413642 NBPF5PQ86XG9 351 aaPredicted RBP34.39■■■■□ 3.1
VEGFA-207ENST00000413642 ADCY9O60503 1353 aa34.38■■■■□ 3.09
VEGFA-207ENST00000413642 ZBTB3Q9H5J0 574 aa34.38■■■■□ 3.09
VEGFA-207ENST00000413642 MAP3K15Q6ZN16 1313 aa34.37■■■■□ 3.09
VEGFA-207ENST00000413642 LRP10Q7Z4F1 713 aa34.37■■■■□ 3.09
VEGFA-207ENST00000413642 MRS2Q9HD23 443 aa34.37■■■■□ 3.09
VEGFA-207ENST00000413642 ERBB4Q15303 1308 aa34.36■■■■□ 3.09
VEGFA-207ENST00000413642 RGL2O15211 777 aa34.36■■■■□ 3.09
VEGFA-207ENST00000413642 KIF6Q6ZMV9 814 aa34.36■■■■□ 3.09
VEGFA-207ENST00000413642 ERVV-1B6SEH8 477 aa34.35■■■■□ 3.09
VEGFA-207ENST00000413642 PDE6BP35913 854 aa34.35■■■■□ 3.09
VEGFA-207ENST00000413642 ST5P78524 1137 aa34.35■■■■□ 3.09
VEGFA-207ENST00000413642 TTLL6Q8N841 843 aa34.35■■■■□ 3.09
VEGFA-207ENST00000413642 ZNF526Q8TF50 670 aaPredicted RBP34.35■■■■□ 3.09
VEGFA-207ENST00000413642 ZNF622Q969S3 477 aaKnown RBP eCLIP34.35■■■■□ 3.093e-13■□□□□ 10.7
VEGFA-207ENST00000413642 CFAP44Q96MT7 982 aa34.35■■■■□ 3.09
VEGFA-207ENST00000413642 MBIPQ9NS73 344 aa34.34■■■■□ 3.09
VEGFA-207ENST00000413642 ZNF853P0CG23 659 aa34.32■■■■□ 3.08
VEGFA-207ENST00000413642 ANKRD31Q8N7Z5 1873 aa34.32■■■■□ 3.08
VEGFA-207ENST00000413642 GPTP24298 496 aa34.3■■■■□ 3.08
VEGFA-207ENST00000413642 TPTE2Q6XPS3 522 aa34.3■■■■□ 3.08
VEGFA-207ENST00000413642 C9orf131Q5VYM1 1079 aa34.29■■■■□ 3.08
VEGFA-207ENST00000413642 ZNF219Q9P2Y4 722 aaPredicted RBP34.29■■■■□ 3.08
VEGFA-207ENST00000413642 SRGNP10124 158 aa34.27■■■■□ 3.08
VEGFA-207ENST00000413642 RASSF7Q02833 373 aa34.27■■■■□ 3.08
VEGFA-207ENST00000413642 PDZRN3Q9UPQ7 1066 aa34.27■■■■□ 3.08
VEGFA-207ENST00000413642 ARFGEF1Q9Y6D6 1849 aa34.27■■■■□ 3.08
VEGFA-207ENST00000413642 UBN2Q6ZU65 1347 aa34.27■■■■□ 3.08
VEGFA-207ENST00000413642 AIMP1Q12904 312 aaKnown RBP34.26■■■■□ 3.08
VEGFA-207ENST00000413642 DUSP27Q5VZP5 1158 aa34.26■■■■□ 3.08
VEGFA-207ENST00000413642 COPS6Q7L5N1 327 aa34.26■■■■□ 3.08
VEGFA-207ENST00000413642 XAGE3Q8WTP9 111 aa34.26■■■■□ 3.08
VEGFA-207ENST00000413642 IFT57Q9NWB7 429 aa34.26■■■■□ 3.08
VEGFA-207ENST00000413642 HDGFL1Q5TGJ6 251 aa34.25■■■■□ 3.07
VEGFA-207ENST00000413642 GIGYF2Q6Y7W6 1299 aaKnown RBP34.25■■■■□ 3.07
VEGFA-207ENST00000413642 NUTM1Q86Y26 1132 aa34.25■■■■□ 3.07
VEGFA-207ENST00000413642 GPBP1L1Q9HC44 474 aaPredicted RBP34.25■■■■□ 3.07
VEGFA-207ENST00000413642 DDX21Q9NR30 783 aaKnown RBP eCLIP34.25■■■■□ 3.07
VEGFA-207ENST00000413642 CHPF2Q9P2E5 772 aa34.25■■■■□ 3.07
VEGFA-207ENST00000413642 DLEC1Q9Y238 1755 aa34.24■■■■□ 3.07
VEGFA-207ENST00000413642 GNAI1P63096 354 aa34.24■■■■□ 3.07
VEGFA-207ENST00000413642 SUSD4Q5VX71 490 aa34.24■■■■□ 3.07
VEGFA-207ENST00000413642 ZNF34Q8IZ26 560 aa34.24■■■■□ 3.07
VEGFA-207ENST00000413642 COL11A2P13942 1736 aaPredicted RBP34.24■■■■□ 3.07
VEGFA-207ENST00000413642 C21orf2O43822 256 aa34.23■■■■□ 3.07
VEGFA-207ENST00000413642 GTF2E1P29083 439 aaPredicted RBP34.23■■■■□ 3.07
VEGFA-207ENST00000413642 STYK1Q6J9G0 422 aa34.23■■■■□ 3.07
VEGFA-207ENST00000413642 ELL2O00472 640 aaPredicted RBP34.22■■■■□ 3.07
VEGFA-207ENST00000413642 PRELPP51888 382 aa34.22■■■■□ 3.07
VEGFA-207ENST00000413642 CALD1Q05682 793 aaKnown RBP34.22■■■■□ 3.07
VEGFA-207ENST00000413642 ERFEQ4G0M1 354 aa34.22■■■■□ 3.07
VEGFA-207ENST00000413642 MASTLQ96GX5 879 aa34.22■■■■□ 3.07
VEGFA-207ENST00000413642 RNF181Q9P0P0 153 aa34.22■■■■□ 3.07
VEGFA-207ENST00000413642 HOXB7P09629 217 aa34.21■■■■□ 3.07
VEGFA-207ENST00000413642 ABCC12Q96J65 1359 aa34.21■■■■□ 3.07
VEGFA-207ENST00000413642 KLRG2A4D1S0 409 aaPredicted RBP34.2■■■■□ 3.07
VEGFA-207ENST00000413642 CNKSR1Q969H4 720 aa34.2■■■■□ 3.07
VEGFA-207ENST00000413642 NFKBIEO00221 500 aa34.18■■■■□ 3.06
VEGFA-207ENST00000413642 C1QTNF8P60827 252 aa34.18■■■■□ 3.06
VEGFA-207ENST00000413642 PRPF40BQ6NWY9 871 aaKnown RBP34.18■■■■□ 3.06
VEGFA-207ENST00000413642 C8orf58Q8NAV2 365 aa34.18■■■■□ 3.06
VEGFA-207ENST00000413642 NYXQ9GZU5 481 aa34.18■■■■□ 3.06
VEGFA-207ENST00000413642 WWC1Q8IX03 1113 aa34.17■■■■□ 3.06
VEGFA-207ENST00000413642 NUP98P52948 1817 aa34.16■■■■□ 3.06
VEGFA-207ENST00000413642 NPR1P16066 1061 aa34.16■■■■□ 3.06
VEGFA-207ENST00000413642 NTSR2O95665 410 aa34.15■■■■□ 3.06
VEGFA-207ENST00000413642 CCDC27Q2M243 656 aa34.15■■■■□ 3.06
VEGFA-207ENST00000413642 TSR2Q969E8 191 aaKnown RBP34.15■■■■□ 3.06
VEGFA-207ENST00000413642 DBF4Q9UBU7 674 aaPredicted RBP34.15■■■■□ 3.06
VEGFA-207ENST00000413642 SALL2Q9Y467 1007 aaPredicted RBP34.15■■■■□ 3.06
VEGFA-207ENST00000413642 ZNF428Q96B54 188 aa34.13■■■■□ 3.05
VEGFA-207ENST00000413642 PARP10Q53GL7 1025 aa34.12■■■■□ 3.05
VEGFA-207ENST00000413642 FAM9BQ8IZU0 186 aa34.12■■■■□ 3.05
VEGFA-207ENST00000413642 IBTKQ9P2D0 1353 aaPredicted RBP34.11■■■■□ 3.05
VEGFA-207ENST00000413642 LMNB1P20700 586 aa34.11■■■■□ 3.05
VEGFA-207ENST00000413642 C3orf67Q6ZVT6 689 aa34.11■■■■□ 3.05
VEGFA-207ENST00000413642 TSPYL6Q8N831 410 aa34.11■■■■□ 3.05
VEGFA-207ENST00000413642 TNRC6CQ9HCJ0 1690 aaKnown RBP34.1■■■■□ 3.05
VEGFA-207ENST00000413642 TCIRG1Q13488 830 aa34.1■■■■□ 3.05
VEGFA-207ENST00000413642 OLFM4Q6UX06 510 aa34.1■■■■□ 3.05
VEGFA-207ENST00000413642 PPP1R42Q7Z4L9 355 aa34.1■■■■□ 3.05
VEGFA-207ENST00000413642 C7orf43Q8WVR3 580 aa34.1■■■■□ 3.05
VEGFA-207ENST00000413642 SLX4Q8IY92 1834 aa34.09■■■■□ 3.05
VEGFA-207ENST00000413642 KIF3CO14782 793 aa34.09■■■■□ 3.05
VEGFA-207ENST00000413642 NLRP10Q86W26 655 aa34.09■■■■□ 3.05
VEGFA-207ENST00000413642 UTP14AQ9BVJ6 771 aaKnown RBP34.09■■■■□ 3.05
VEGFA-207ENST00000413642 NMRK2Q9NPI5 230 aa34.09■■■■□ 3.05
VEGFA-207ENST00000413642 CRY2Q49AN0 593 aa34.08■■■■□ 3.05
VEGFA-207ENST00000413642 PLBD2Q8NHP8 589 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms