RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 CCDC97Q96F63 343 aaPredicted RBP7.1□□□□□ -1.27
RNU4-55P-201ENST00000410731 HINFPQ9BQA5 517 aa7.1□□□□□ -1.27
RNU4-55P-201ENST00000410731 SERPINA10Q9UK55 444 aa7.1□□□□□ -1.27
RNU4-55P-201ENST00000410731 NOVA2Q9UNW9 492 aaKnown RBP7.1□□□□□ -1.27
RNU4-55P-201ENST00000410731 KHNYNO15037 678 aaKnown RBP7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 EFSO43281 561 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 SRPK2P78362 688 aaKnown RBP7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 CTBSQ01459 385 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 LAMC2Q13753 1193 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 ELOAQ14241 798 aaKnown RBP7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 CDCA8Q53HL2 280 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 LRRC69Q6ZNQ3 347 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 ENAMQ9NRM1 1142 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 GDF2Q9UK05 429 aaPredicted RBP7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 HCN4Q9Y3Q4 1203 aa7.09□□□□□ -1.27
RNU4-55P-201ENST00000410731 RNF225M0QZC1 329 aaPredicted RBP7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 OIP5O43482 229 aa7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 CD33P20138 364 aa7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 ALDH16A1Q8IZ83 802 aa7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 GOLGA6L1Q8N7Z2 621 aa7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 CHMP7Q8WUX9 453 aaPredicted RBP7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
RNU4-55P-201ENST00000410731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 ARID3CA6NKF2 412 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 LGR5O75473 907 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 ARAFP10398 606 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 WEE1P30291 646 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 SWI5Q1ZZU3 235 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 SLCO4C1Q6ZQN7 724 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
RNU4-55P-201ENST00000410731 FOXO3O43524 673 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 ATG7O95352 703 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 HIF1AQ16665 826 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 RTN1Q16799 776 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 C14orf37Q86TY3 774 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 PBXIP1Q96AQ6 731 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 HSH2DQ96JZ2 352 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 SUSD3Q96L08 255 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 AVENQ9NQS1 362 aaPredicted RBP7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 MARK1Q9P0L2 795 aa7.06□□□□□ -1.28
RNU4-55P-201ENST00000410731 ACIN1Q9UKV3 1341 aaKnown RBP7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 MARSP56192 900 aaKnown RBP7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 STK32AQ8WU08 396 aa7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 NGLY1Q96IV0 654 aa7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 STRN4Q9NRL3 753 aa7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 GGA1Q9UJY5 639 aa7.05□□□□□ -1.28
RNU4-55P-201ENST00000410731 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
RNU4-55P-201ENST00000410731 TYRO3Q06418 890 aa7.04□□□□□ -1.28
RNU4-55P-201ENST00000410731 ZNF468Q5VIY5 522 aaPredicted RBP7.04□□□□□ -1.28
RNU4-55P-201ENST00000410731 C1orf229Q6ZS94 237 aaPredicted RBP7.04□□□□□ -1.28
RNU4-55P-201ENST00000410731 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
RNU4-55P-201ENST00000410731 SCARF2Q96GP6 870 aaPredicted RBP7.04□□□□□ -1.28
RNU4-55P-201ENST00000410731 ADH6P28332 368 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 GSK3AP49840 483 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 FAM69CQ0P6D2 419 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 IER5Q5VY09 327 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 GALNT6Q8NCL4 622 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 ZNF280CQ8ND82 737 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 EDARADDQ8WWZ3 215 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 CEP63Q96MT8 703 aa7.03□□□□□ -1.28
RNU4-55P-201ENST00000410731 EPXP11678 715 aa7.02□□□□□ -1.29
RNU4-55P-201ENST00000410731 KCNQ4P56696 695 aa7.02□□□□□ -1.29
RNU4-55P-201ENST00000410731 CCDC82Q8N4S0 544 aa7.02□□□□□ -1.29
RNU4-55P-201ENST00000410731 BRD7Q9NPI1 651 aa7.02□□□□□ -1.29
RNU4-55P-201ENST00000410731 DNMT3AQ9Y6K1 912 aaPredicted RBP7.02□□□□□ -1.29
RNU4-55P-201ENST00000410731 NEURL1BA8MQ27 555 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 TGFBR3LH3BV60 316 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 OCLNQ16625 522 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 TMEM164Q5U3C3 297 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 PODNQ7Z5L7 613 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 VTI1AQ96AJ9 217 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 MYO19Q96H55 970 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 C1orf115Q9H7X2 142 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 QTRT2Q9H974 415 aaKnown RBP7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 KLF15Q9UIH9 416 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 PRR12Q9ULL5 1215 aa7.01□□□□□ -1.29
RNU4-55P-201ENST00000410731 RASSF7Q02833 373 aa7□□□□□ -1.29
RNU4-55P-201ENST00000410731 FKBP5Q13451 457 aaPredicted RBP7□□□□□ -1.29
RNU4-55P-201ENST00000410731 KANK3Q6NY19 840 aa7□□□□□ -1.29
RNU4-55P-201ENST00000410731 FCHSD1Q86WN1 690 aa7□□□□□ -1.29
RNU4-55P-201ENST00000410731 KCNH4Q9UQ05 1017 aa7□□□□□ -1.29
RNU4-55P-201ENST00000410731 PHF20L1A8MW92 1017 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 PRMT3O60678 531 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 IRS1P35568 1242 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 PCBP4P57723 403 aaKnown RBP6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 SPEM2Q0P670 501 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 GRIN2CQ14957 1233 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 BEND7Q8N7W2 519 aaPredicted RBP6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 PRIMPOLQ96LW4 560 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 SLC30A3Q99726 388 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 DMGDHQ9UI17 866 aaKnown RBP6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 BCS1LQ9Y276 419 aa6.99□□□□□ -1.29
RNU4-55P-201ENST00000410731 SIN3BO75182 1162 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms