RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 SPG7Q9UQ90 795 aa19.2■□□□□ 0.66
HOXD3-202ENST00000410016 KRT28Q7Z3Y7 464 aa19.2■□□□□ 0.66
HOXD3-202ENST00000410016 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
HOXD3-202ENST00000410016 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 MBD3O95983 291 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 GRM8O00222 908 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 LRSAM1Q6UWE0 723 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 KIAA1211Q6ZU35 1233 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 HDAC5Q9UQL6 1122 aa19.19■□□□□ 0.66
HOXD3-202ENST00000410016 ERC1Q8IUD2 1116 aa19.18■□□□□ 0.66
HOXD3-202ENST00000410016 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
HOXD3-202ENST00000410016 SUCLG2Q96I99 432 aa19.18■□□□□ 0.66
HOXD3-202ENST00000410016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.18■□□□□ 0.66
HOXD3-202ENST00000410016 ERBB3P21860 1342 aa19.18■□□□□ 0.66
HOXD3-202ENST00000410016 AK2P54819 239 aa19.18■□□□□ 0.66
HOXD3-202ENST00000410016 RUFY3Q7L099 469 aa19.18■□□□□ 0.66
HOXD3-202ENST00000410016 SYCE3A1L190 88 aa19.17■□□□□ 0.66
HOXD3-202ENST00000410016 SASH1O94885 1247 aa19.17■□□□□ 0.66
HOXD3-202ENST00000410016 ADAMTS7Q9UKP4 1686 aa19.17■□□□□ 0.66
HOXD3-202ENST00000410016 SIPA1L3O60292 1781 aaPredicted RBP19.17■□□□□ 0.66
HOXD3-202ENST00000410016 PTH1RQ03431 593 aa19.17■□□□□ 0.66
HOXD3-202ENST00000410016 PDLIM2Q96JY6 352 aa19.17■□□□□ 0.66
HOXD3-202ENST00000410016 WDR33Q9C0J8 1336 aaKnown RBP19.17■□□□□ 0.66
HOXD3-202ENST00000410016 TRPM3Q9HCF6 1732 aaPredicted RBP19.16■□□□□ 0.66
HOXD3-202ENST00000410016 RPAP1Q9BWH6 1393 aaPredicted RBP19.16■□□□□ 0.66
HOXD3-202ENST00000410016 IFIT2P09913 472 aaKnown RBP19.16■□□□□ 0.66
HOXD3-202ENST00000410016 KCNB2Q92953 911 aa19.16■□□□□ 0.66
HOXD3-202ENST00000410016 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
HOXD3-202ENST00000410016 DIAPH3Q9NSV4 1193 aa19.16■□□□□ 0.66
HOXD3-202ENST00000410016 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
HOXD3-202ENST00000410016 MST1RQ04912 1400 aa19.16■□□□□ 0.66
HOXD3-202ENST00000410016 IGKV5-2P06315 115 aa19.15■□□□□ 0.66
HOXD3-202ENST00000410016 ZNF790Q6PG37 636 aa19.15■□□□□ 0.66
HOXD3-202ENST00000410016 RUFY2Q8WXA3 655 aa19.15■□□□□ 0.66
HOXD3-202ENST00000410016 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
HOXD3-202ENST00000410016 AIMP1Q12904 312 aaKnown RBP19.15■□□□□ 0.66
HOXD3-202ENST00000410016 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
HOXD3-202ENST00000410016 EVI5LQ96CN4 794 aa19.15■□□□□ 0.66
HOXD3-202ENST00000410016 AACSQ86V21 672 aa19.14■□□□□ 0.66
HOXD3-202ENST00000410016 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
HOXD3-202ENST00000410016 GPATCH3Q96I76 525 aa19.14■□□□□ 0.65
HOXD3-202ENST00000410016 LARP6Q9BRS8 491 aaKnown RBP19.14■□□□□ 0.65
HOXD3-202ENST00000410016 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.65
HOXD3-202ENST00000410016 CPA1P15085 419 aa19.13■□□□□ 0.65
HOXD3-202ENST00000410016 ZC3H6P61129 1189 aaKnown RBP19.13■□□□□ 0.65
HOXD3-202ENST00000410016 NECTIN1Q15223 517 aa19.13■□□□□ 0.65
HOXD3-202ENST00000410016 ADCK5Q3MIX3 580 aa19.13■□□□□ 0.65
HOXD3-202ENST00000410016 GDPD2Q9HCC8 539 aa19.13■□□□□ 0.65
HOXD3-202ENST00000410016 GADD45BO75293 160 aaPredicted RBP19.13■□□□□ 0.65
HOXD3-202ENST00000410016 CASTP20810 708 aaKnown RBP19.13■□□□□ 0.65
HOXD3-202ENST00000410016 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
HOXD3-202ENST00000410016 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
HOXD3-202ENST00000410016 USP48Q86UV5 1035 aa19.13■□□□□ 0.65
HOXD3-202ENST00000410016 SLC52A2Q9HAB3 445 aa19.13■□□□□ 0.65
HOXD3-202ENST00000410016 ZSCAN30Q86W11 494 aa19.12■□□□□ 0.65
HOXD3-202ENST00000410016 PROSER2Q86WR7 435 aaPredicted RBP19.12■□□□□ 0.65
HOXD3-202ENST00000410016 TM6SF1Q9BZW5 370 aa19.12■□□□□ 0.65
HOXD3-202ENST00000410016 ZSWIM6Q9HCJ5 1215 aa19.12■□□□□ 0.65
HOXD3-202ENST00000410016 KDM6AO15550 1401 aaPredicted RBP19.12■□□□□ 0.65
HOXD3-202ENST00000410016 NPHP3Q7Z494 1330 aa19.12■□□□□ 0.65
HOXD3-202ENST00000410016 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
HOXD3-202ENST00000410016 ADAMTSL3P82987 1691 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 SYT1P21579 422 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.65
HOXD3-202ENST00000410016 HS1BP3Q53T59 392 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 VPS53Q5VIR6 699 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
HOXD3-202ENST00000410016 LARP1Q6PKG0 1096 aaKnown RBP19.11■□□□□ 0.65
HOXD3-202ENST00000410016 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 NFATC2IPQ8NCF5 419 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 C19orf44Q9H6X5 657 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.11■□□□□ 0.65
HOXD3-202ENST00000410016 NEURL1BA8MQ27 555 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 LARGE1O95461 756 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 RAPGEF4Q8WZA2 1011 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 SNRKQ9NRH2 765 aa19.11■□□□□ 0.65
HOXD3-202ENST00000410016 ZSCAN22P10073 491 aaPredicted RBP19.1■□□□□ 0.65
HOXD3-202ENST00000410016 PHKG2P15735 406 aa19.1■□□□□ 0.65
HOXD3-202ENST00000410016 LRP10Q7Z4F1 713 aa19.1■□□□□ 0.65
HOXD3-202ENST00000410016 CCDC8Q9H0W5 538 aaPredicted RBP19.1■□□□□ 0.65
HOXD3-202ENST00000410016 STX6O43752 255 aa19.1■□□□□ 0.65
HOXD3-202ENST00000410016 GCKRQ14397 625 aa19.1■□□□□ 0.65
HOXD3-202ENST00000410016 MAP4K1Q92918 833 aa19.1■□□□□ 0.65
HOXD3-202ENST00000410016 FAM227BQ96M60 508 aa19.1■□□□□ 0.65
HOXD3-202ENST00000410016 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
HOXD3-202ENST00000410016 CCDC171Q6TFL3 1326 aa19.09■□□□□ 0.65
HOXD3-202ENST00000410016 RGPD5Q99666 1765 aa19.09■□□□□ 0.65
HOXD3-202ENST00000410016 JAKMIP1Q96N16 626 aaKnown RBP19.09■□□□□ 0.65
HOXD3-202ENST00000410016 NAP1L5Q96NT1 182 aaPredicted RBP19.09■□□□□ 0.65
HOXD3-202ENST00000410016 MYL6BP14649 208 aa19.08■□□□□ 0.65
HOXD3-202ENST00000410016 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.65
HOXD3-202ENST00000410016 COPS6Q7L5N1 327 aa19.08■□□□□ 0.65
HOXD3-202ENST00000410016 XAGE3Q8WTP9 111 aa19.08■□□□□ 0.65
HOXD3-202ENST00000410016 ZNF496Q96IT1 587 aaPredicted RBP19.08■□□□□ 0.65
HOXD3-202ENST00000410016 PDRG1Q9NUG6 133 aa19.08■□□□□ 0.65
HOXD3-202ENST00000410016 NLRP2Q9NX02 1062 aa19.08■□□□□ 0.65
HOXD3-202ENST00000410016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.65
HOXD3-202ENST00000410016 KLHDC4Q8TBB5 520 aa19.08■□□□□ 0.64
HOXD3-202ENST00000410016 METTL22Q9BUU2 404 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms