RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CASZ1Q86V15 1759 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 IGKV5-2P06315 115 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 UBTFL1P0CB47 393 aaPredicted RBP6.9□□□□□ -1.3
EPHA4-202ENST00000409854 PDE4AP27815 886 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 ATP8B2P98198 1209 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 MEX3CQ5U5Q3 659 aaKnown RBP6.9□□□□□ -1.3
EPHA4-202ENST00000409854 ANKRD13DQ6ZTN6 518 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 SCN7AQ01118 1682 aa6.9□□□□□ -1.3
EPHA4-202ENST00000409854 CHD1LQ86WJ1 897 aa6.9□□□□□ -1.31
EPHA4-202ENST00000409854 DNAJC10Q8IXB1 793 aa6.9□□□□□ -1.31
EPHA4-202ENST00000409854 TRPC5Q9UL62 973 aaPredicted RBP6.9□□□□□ -1.31
EPHA4-202ENST00000409854 HMMRO75330 724 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 A1BGP04217 495 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 NBPF7P0C2Y1 421 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 CYP19A1P11511 503 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 RGS3P49796 1198 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 AIMP1Q12904 312 aaKnown RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 MTX1Q13505 466 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 RIC3Q7Z5B4 369 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 NEURL1BA8MQ27 555 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 PIP4K2AP48426 406 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 POLA2Q14181 598 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 SSH3Q8TE77 659 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 STARD3NLO95772 234 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
EPHA4-202ENST00000409854 PALLDQ8WX93 1383 aa6.89□□□□□ -1.31
EPHA4-202ENST00000409854 PNMA6EA0A0J9YXQ4 647 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 GRM8O00222 908 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 NEXNQ0ZGT2 675 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 RBM42Q9BTD8 480 aaKnown RBP6.88□□□□□ -1.31
EPHA4-202ENST00000409854 HDAC5Q9UQL6 1122 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 AK9Q5TCS8 1911 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 C4AP0C0L4 1744 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 C4BP0C0L5 1744 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 GCKRQ14397 625 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 FAM161AQ3B820 660 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 TTLL7Q6ZT98 887 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 SMARCC1Q92922 1105 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-202ENST00000409854 SYTL4Q96C24 671 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-202ENST00000409854 ACSBG1Q96GR2 724 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 MYD88Q99836 296 aa6.88□□□□□ -1.31
EPHA4-202ENST00000409854 KAZALD1Q96I82 304 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 DDX60Q8IY21 1712 aaKnown RBP6.87□□□□□ -1.31
EPHA4-202ENST00000409854 COL24A1Q17RW2 1714 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 KCNQ2O43526 872 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 CASP7P55210 303 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 SIK1P57059 783 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 ANKRD45Q5TZF3 282 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 LNPKQ9C0E8 428 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 C9orf78Q9NZ63 289 aaPredicted RBP6.87□□□□□ -1.31
EPHA4-202ENST00000409854 RGPD3A6NKT7 1758 aaPredicted RBP6.87□□□□□ -1.31
EPHA4-202ENST00000409854 RGPD4Q7Z3J3 1758 aa6.87□□□□□ -1.31
EPHA4-202ENST00000409854 IL6STP40189 918 aaPredicted RBP6.86□□□□□ -1.31
EPHA4-202ENST00000409854 SUCLG2Q96I99 432 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 UBR3Q6ZT12 1888 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 PPP1R42Q7Z4L9 355 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 ISCA1Q9BUE6 129 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 ZBTB1Q9Y2K1 713 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 MAP3K15Q6ZN16 1313 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 SALL3Q9BXA9 1300 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 TRIM28Q13263 835 aaKnown RBP6.86□□□□□ -1.31
EPHA4-202ENST00000409854 ITPK1Q13572 414 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 INTS5Q6P9B9 1019 aaKnown RBP6.86□□□□□ -1.31
EPHA4-202ENST00000409854 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
EPHA4-202ENST00000409854 NOP58Q9Y2X3 529 aaKnown RBP6.86□□□□□ -1.31
EPHA4-202ENST00000409854 TNS1Q9HBL0 1735 aaKnown RBP6.86□□□□□ -1.31
EPHA4-202ENST00000409854 H7C1W4 665 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 EIF5P55010 431 aaKnown RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 RABL6Q3YEC7 729 aaPredicted RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 SEPT12Q8IYM1 358 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 CCDC191Q8NCU4 936 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 QTRT2Q9H974 415 aaKnown RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 CCDC87Q9NVE4 849 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 ERVV-1B6SEH8 477 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 ATP6V1AP38606 617 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 KIF6Q6ZMV9 814 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 KCNA4P22459 653 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 CRKLP46109 303 aaKnown RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 BMP2KLQ5H9B9 411 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 GIGYF2Q6Y7W6 1299 aaKnown RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 PLEKHM2Q8IWE5 1019 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 ZBTB3Q9H5J0 574 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 BICC1Q9H694 974 aaKnown RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 CWC25Q9NXE8 425 aaPredicted RBP6.85□□□□□ -1.31
EPHA4-202ENST00000409854 CNTNAP4Q9C0A0 1308 aa6.85□□□□□ -1.31
EPHA4-202ENST00000409854 LRP5O75197 1615 aa6.84□□□□□ -1.31
EPHA4-202ENST00000409854 ATP5J2-PTCD1G3V325 749 aa6.84□□□□□ -1.31
EPHA4-202ENST00000409854 OSBPL3Q9H4L5 887 aa6.84□□□□□ -1.31
EPHA4-202ENST00000409854 EXOC6BQ9Y2D4 811 aa6.84□□□□□ -1.31
EPHA4-202ENST00000409854 PTF1AQ7RTS3 328 aa6.84□□□□□ -1.31
EPHA4-202ENST00000409854 LRRCC1Q9C099 1032 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms