RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 PTGER2P43116 358 aa23.3■■□□□ 1.32
PAX3-208ENST00000409828 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
PAX3-208ENST00000409828 ANXA1P04083 346 aa23.29■■□□□ 1.32
PAX3-208ENST00000409828 POLD1P28340 1107 aa23.29■■□□□ 1.32
PAX3-208ENST00000409828 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
PAX3-208ENST00000409828 FKBP8Q14318 412 aa23.28■■□□□ 1.32
PAX3-208ENST00000409828 TTLL7Q6ZT98 887 aa23.28■■□□□ 1.32
PAX3-208ENST00000409828 XAGE3Q8WTP9 111 aa23.28■■□□□ 1.32
PAX3-208ENST00000409828 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
PAX3-208ENST00000409828 SLC4A2P04920 1241 aa23.27■■□□□ 1.32
PAX3-208ENST00000409828 TM4SF1P30408 202 aa23.27■■□□□ 1.32
PAX3-208ENST00000409828 ALDH1L2Q3SY69 923 aa23.27■■□□□ 1.32
PAX3-208ENST00000409828 ARXQ96QS3 562 aa23.27■■□□□ 1.32
PAX3-208ENST00000409828 PLBD2Q8NHP8 589 aa23.26■■□□□ 1.31
PAX3-208ENST00000409828 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
PAX3-208ENST00000409828 GIGYF2Q6Y7W6 1299 aaKnown RBP23.25■■□□□ 1.31
PAX3-208ENST00000409828 ANKRD13DQ6ZTN6 518 aa23.25■■□□□ 1.31
PAX3-208ENST00000409828 ANKRD36CQ5JPF3 1778 aa23.24■■□□□ 1.31
PAX3-208ENST00000409828 DDX58O95786 925 aaKnown RBP23.24■■□□□ 1.31
PAX3-208ENST00000409828 HSP90AB3PQ58FF7 597 aa23.24■■□□□ 1.31
PAX3-208ENST00000409828 MSL1Q68DK7 614 aa23.24■■□□□ 1.31
PAX3-208ENST00000409828 PHAXQ9H814 394 aaKnown RBP23.24■■□□□ 1.31
PAX3-208ENST00000409828 NRXN2Q9P2S2 1712 aa23.23■■□□□ 1.31
PAX3-208ENST00000409828 MMP10P09238 476 aa23.23■■□□□ 1.31
PAX3-208ENST00000409828 BRPF1P55201 1214 aaPredicted RBP23.23■■□□□ 1.31
PAX3-208ENST00000409828 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
PAX3-208ENST00000409828 NFIXQ14938 502 aa23.23■■□□□ 1.31
PAX3-208ENST00000409828 ARFGEF2Q9Y6D5 1785 aa23.22■■□□□ 1.31
PAX3-208ENST00000409828 HLFQ16534 295 aa23.22■■□□□ 1.31
PAX3-208ENST00000409828 FLIIQ13045 1269 aa23.21■■□□□ 1.31
PAX3-208ENST00000409828 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
PAX3-208ENST00000409828 SETDB2Q96T68 719 aa23.21■■□□□ 1.31
PAX3-208ENST00000409828 ZBTB3Q9H5J0 574 aa23.21■■□□□ 1.31
PAX3-208ENST00000409828 PARP3Q9Y6F1 533 aa23.21■■□□□ 1.31
PAX3-208ENST00000409828 CARMIL3Q8ND23 1372 aa23.21■■□□□ 1.31
PAX3-208ENST00000409828 AFDNP55196 1824 aaKnown RBP23.21■■□□□ 1.31
PAX3-208ENST00000409828 KSR2Q6VAB6 950 aa23.2■■□□□ 1.3
PAX3-208ENST00000409828 SSH1Q8WYL5 1049 aa23.2■■□□□ 1.3
PAX3-208ENST00000409828 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
PAX3-208ENST00000409828 POLRMTO00411 1230 aaKnown RBP23.19■■□□□ 1.3
PAX3-208ENST00000409828 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
PAX3-208ENST00000409828 DDR1Q08345 913 aa23.19■■□□□ 1.3
PAX3-208ENST00000409828 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
PAX3-208ENST00000409828 G2E3Q7L622 706 aa23.19■■□□□ 1.3
PAX3-208ENST00000409828 ZNF34Q8IZ26 560 aa23.19■■□□□ 1.3
PAX3-208ENST00000409828 MRPL50Q8N5N7 158 aaKnown RBP23.19■■□□□ 1.3
PAX3-208ENST00000409828 KIF13BQ9NQT8 1826 aa23.19■■□□□ 1.3
PAX3-208ENST00000409828 IBTKQ9P2D0 1353 aaPredicted RBP23.18■■□□□ 1.3
PAX3-208ENST00000409828 RARSP54136 660 aaKnown RBP23.18■■□□□ 1.3
PAX3-208ENST00000409828 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
PAX3-208ENST00000409828 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
PAX3-208ENST00000409828 RIC3Q7Z5B4 369 aa23.18■■□□□ 1.3
PAX3-208ENST00000409828 NIP7Q9Y221 180 aaKnown RBP eCLIP23.18■■□□□ 1.3
PAX3-208ENST00000409828 PTPRCP08575 1304 aa23.16■■□□□ 1.3
PAX3-208ENST00000409828 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
PAX3-208ENST00000409828 SERPINB2P05120 415 aa23.15■■□□□ 1.3
PAX3-208ENST00000409828 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
PAX3-208ENST00000409828 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
PAX3-208ENST00000409828 ISCA1Q9BUE6 129 aa23.15■■□□□ 1.3
PAX3-208ENST00000409828 METTL22Q9BUU2 404 aaPredicted RBP23.15■■□□□ 1.3
PAX3-208ENST00000409828 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
PAX3-208ENST00000409828 PPP1R1BQ9UD71 204 aaPredicted RBP23.15■■□□□ 1.3
PAX3-208ENST00000409828 CD2APQ9Y5K6 639 aa23.15■■□□□ 1.3
PAX3-208ENST00000409828 ADCY9O60503 1353 aa23.14■■□□□ 1.3
PAX3-208ENST00000409828 RNF123Q5XPI4 1314 aa23.14■■□□□ 1.3
PAX3-208ENST00000409828 BICDL1Q6ZP65 573 aa23.14■■□□□ 1.29
PAX3-208ENST00000409828 NYXQ9GZU5 481 aa23.14■■□□□ 1.29
PAX3-208ENST00000409828 TPTE2Q6XPS3 522 aa23.13■■□□□ 1.29
PAX3-208ENST00000409828 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
PAX3-208ENST00000409828 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
PAX3-208ENST00000409828 C10orf71Q711Q0 1435 aa23.13■■□□□ 1.29
PAX3-208ENST00000409828 PPP1R42Q7Z4L9 355 aa23.12■■□□□ 1.29
PAX3-208ENST00000409828 DNAAF4Q8WXU2 420 aa23.12■■□□□ 1.29
PAX3-208ENST00000409828 UBN2Q6ZU65 1347 aa23.11■■□□□ 1.29
PAX3-208ENST00000409828 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
PAX3-208ENST00000409828 NEXNQ0ZGT2 675 aa23.11■■□□□ 1.29
PAX3-208ENST00000409828 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
PAX3-208ENST00000409828 ARHGAP45Q92619 1136 aa23.11■■□□□ 1.29
PAX3-208ENST00000409828 GPTP24298 496 aa23.1■■□□□ 1.29
PAX3-208ENST00000409828 PRR5LQ6MZQ0 368 aa23.1■■□□□ 1.29
PAX3-208ENST00000409828 NBPF5PQ86XG9 351 aaPredicted RBP23.1■■□□□ 1.29
PAX3-208ENST00000409828 CNBD1Q8NA66 436 aa23.1■■□□□ 1.29
PAX3-208ENST00000409828 CCDC191Q8NCU4 936 aa23.1■■□□□ 1.29
PAX3-208ENST00000409828 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
PAX3-208ENST00000409828 BCL2L13Q9BXK5 485 aa23.09■■□□□ 1.29
PAX3-208ENST00000409828 PDZRN3Q9UPQ7 1066 aa23.09■■□□□ 1.29
PAX3-208ENST00000409828 TGFB2P61812 414 aa23.08■■□□□ 1.29
PAX3-208ENST00000409828 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
PAX3-208ENST00000409828 LINS1Q8NG48 757 aa23.08■■□□□ 1.29
PAX3-208ENST00000409828 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
PAX3-208ENST00000409828 NTSR2O95665 410 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 ST5P78524 1137 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 MYD88Q99836 296 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 UTP14AQ9BVJ6 771 aaKnown RBP23.07■■□□□ 1.28
PAX3-208ENST00000409828 BRIP1Q9BX63 1249 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 FHDC1Q9C0D6 1143 aaPredicted RBP23.07■■□□□ 1.28
PAX3-208ENST00000409828 ANKRD31Q8N7Z5 1873 aa23.07■■□□□ 1.28
PAX3-208ENST00000409828 N4BP2Q86UW6 1770 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms