RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NUP188Q5SRE5 1749 aa19.72■□□□□ 0.75
SHANK2-204ENST00000409530 ATP5J2-PTCD1G3V325 749 aa19.72■□□□□ 0.75
SHANK2-204ENST00000409530 IGHDP01880 384 aa19.71■□□□□ 0.75
SHANK2-204ENST00000409530 BEND3Q5T5X7 828 aa19.71■□□□□ 0.75
SHANK2-204ENST00000409530 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
SHANK2-204ENST00000409530 LY75O60449 1722 aa19.71■□□□□ 0.75
SHANK2-204ENST00000409530 KIF6Q6ZMV9 814 aa19.7■□□□□ 0.74
SHANK2-204ENST00000409530 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
SHANK2-204ENST00000409530 TBC1D2BQ9UPU7 963 aa19.7■□□□□ 0.74
SHANK2-204ENST00000409530 NEXNQ0ZGT2 675 aa19.69■□□□□ 0.74
SHANK2-204ENST00000409530 INTS5Q6P9B9 1019 aaKnown RBP19.69■□□□□ 0.74
SHANK2-204ENST00000409530 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-204ENST00000409530 RTL5Q5HYW3 569 aaPredicted RBP19.68■□□□□ 0.74
SHANK2-204ENST00000409530 PLBD2Q8NHP8 589 aa19.68■□□□□ 0.74
SHANK2-204ENST00000409530 NBPF7P0C2Y1 421 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-204ENST00000409530 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-204ENST00000409530 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
SHANK2-204ENST00000409530 ATP10DQ9P241 1426 aa19.67■□□□□ 0.74
SHANK2-204ENST00000409530 IGKV5-2P06315 115 aa19.67■□□□□ 0.74
SHANK2-204ENST00000409530 UBTFL1P0CB47 393 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-204ENST00000409530 METTL22Q9BUU2 404 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-204ENST00000409530 CHMP4BQ9H444 224 aaKnown RBP19.67■□□□□ 0.74
SHANK2-204ENST00000409530 C9orf78Q9NZ63 289 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-204ENST00000409530 DZIP3Q86Y13 1208 aaKnown RBP19.66■□□□□ 0.74
SHANK2-204ENST00000409530 USP44Q9H0E7 712 aa19.66■□□□□ 0.74
SHANK2-204ENST00000409530 LRRFIP2Q9Y608 721 aaKnown RBP19.66■□□□□ 0.74
SHANK2-204ENST00000409530 GNPATO15228 680 aa19.65■□□□□ 0.74
SHANK2-204ENST00000409530 PHF14O94880 888 aa19.65■□□□□ 0.74
SHANK2-204ENST00000409530 APBA3O96018 575 aa19.65■□□□□ 0.74
SHANK2-204ENST00000409530 LINS1Q8NG48 757 aa19.65■□□□□ 0.74
SHANK2-204ENST00000409530 KDM2BQ8NHM5 1336 aa19.65■□□□□ 0.74
SHANK2-204ENST00000409530 NEURL1BA8MQ27 555 aa19.64■□□□□ 0.74
SHANK2-204ENST00000409530 GPTP24298 496 aa19.64■□□□□ 0.74
SHANK2-204ENST00000409530 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.74
SHANK2-204ENST00000409530 LRRC4BQ9NT99 713 aa19.64■□□□□ 0.74
SHANK2-204ENST00000409530 ZNF831Q5JPB2 1677 aa19.64■□□□□ 0.74
SHANK2-204ENST00000409530 RREB1Q92766 1687 aa19.64■□□□□ 0.74
SHANK2-204ENST00000409530 COL15A1P39059 1388 aa19.64■□□□□ 0.73
SHANK2-204ENST00000409530 AAMPQ13685 434 aa19.64■□□□□ 0.73
SHANK2-204ENST00000409530 HLFQ16534 295 aa19.64■□□□□ 0.73
SHANK2-204ENST00000409530 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
SHANK2-204ENST00000409530 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
SHANK2-204ENST00000409530 GNAI2P04899 355 aa19.63■□□□□ 0.73
SHANK2-204ENST00000409530 GNAI3P08754 354 aa19.63■□□□□ 0.73
SHANK2-204ENST00000409530 RWDD1Q9H446 243 aaPredicted RBP19.63■□□□□ 0.73
SHANK2-204ENST00000409530 MAP3K15Q6ZN16 1313 aa19.62■□□□□ 0.73
SHANK2-204ENST00000409530 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
SHANK2-204ENST00000409530 ALDH1L1O75891 902 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 EIF5P55010 431 aaKnown RBP19.61■□□□□ 0.73
SHANK2-204ENST00000409530 CEP85Q6P2H3 762 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 SIRT2Q8IXJ6 389 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 NUP98P52948 1817 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 FAM177BA6PVY3 158 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 APBB1O00213 710 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 GRM8O00222 908 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 AMIGO3Q86WK7 504 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 AK7Q96M32 723 aa19.61■□□□□ 0.73
SHANK2-204ENST00000409530 GCKRQ14397 625 aa19.6■□□□□ 0.73
SHANK2-204ENST00000409530 ANKRD36CQ5JPF3 1778 aa19.6■□□□□ 0.73
SHANK2-204ENST00000409530 CNTNAP4Q9C0A0 1308 aa19.6■□□□□ 0.73
SHANK2-204ENST00000409530 A0A087WZG4 1122 aa19.59■□□□□ 0.73
SHANK2-204ENST00000409530 TXNRD1Q16881 649 aa19.59■□□□□ 0.73
SHANK2-204ENST00000409530 RGS3P49796 1198 aa19.58■□□□□ 0.72
SHANK2-204ENST00000409530 SUCLG2Q96I99 432 aa19.58■□□□□ 0.72
SHANK2-204ENST00000409530 CWC25Q9NXE8 425 aaPredicted RBP19.58■□□□□ 0.72
SHANK2-204ENST00000409530 PNMA6EA0A0J9YXQ4 647 aa19.57■□□□□ 0.72
SHANK2-204ENST00000409530 GIGYF2Q6Y7W6 1299 aaKnown RBP19.57■□□□□ 0.72
SHANK2-204ENST00000409530 ANKRD44Q8N8A2 993 aa19.57■□□□□ 0.72
SHANK2-204ENST00000409530 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
SHANK2-204ENST00000409530 TCIRG1Q13488 830 aa19.57■□□□□ 0.72
SHANK2-204ENST00000409530 HDAC1Q13547 482 aaPredicted RBP19.57■□□□□ 0.72
SHANK2-204ENST00000409530 RTCBQ9Y3I0 505 aaKnown RBP19.57■□□□□ 0.72
SHANK2-204ENST00000409530 BCORQ6W2J9 1755 aa19.56■□□□□ 0.72
SHANK2-204ENST00000409530 C4AP0C0L4 1744 aa19.56■□□□□ 0.72
SHANK2-204ENST00000409530 BICDL1Q6ZP65 573 aa19.56■□□□□ 0.72
SHANK2-204ENST00000409530 PROM2Q8N271 834 aa19.55■□□□□ 0.72
SHANK2-204ENST00000409530 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
SHANK2-204ENST00000409530 CAMTA2O94983 1202 aa19.55■□□□□ 0.72
SHANK2-204ENST00000409530 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
SHANK2-204ENST00000409530 SCN7AQ01118 1682 aa19.54■□□□□ 0.72
SHANK2-204ENST00000409530 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
SHANK2-204ENST00000409530 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
SHANK2-204ENST00000409530 FAM89AQ96GI7 184 aa19.54■□□□□ 0.72
SHANK2-204ENST00000409530 CHMP3Q9Y3E7 222 aa19.54■□□□□ 0.72
SHANK2-204ENST00000409530 UBN2Q6ZU65 1347 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 UBR3Q6ZT12 1888 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 RPS6KA4O75676 772 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 EN1Q05925 392 aaPredicted RBP19.53■□□□□ 0.72
SHANK2-204ENST00000409530 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 SYNE4Q8N205 404 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 ISCA1Q9BUE6 129 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 PDZRN3Q9UPQ7 1066 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 EXOC6BQ9Y2D4 811 aa19.53■□□□□ 0.72
SHANK2-204ENST00000409530 EPHA10Q5JZY3 1008 aa19.52■□□□□ 0.72
SHANK2-204ENST00000409530 CCDC191Q8NCU4 936 aa19.52■□□□□ 0.72
SHANK2-204ENST00000409530 HMMRO75330 724 aa19.52■□□□□ 0.72
SHANK2-204ENST00000409530 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
SHANK2-204ENST00000409530 KAZALD1Q96I82 304 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms