RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 STIM1Q13586 685 aa19.75■□□□□ 0.75
PCDHA13-202ENST00000409494 TPTE2Q6XPS3 522 aa19.75■□□□□ 0.75
PCDHA13-202ENST00000409494 MRPL50Q8N5N7 158 aaKnown RBP19.75■□□□□ 0.75
PCDHA13-202ENST00000409494 HMGN5P82970 282 aaKnown RBP19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 HMG20BQ9P0W2 317 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 ANKRD44Q8N8A2 993 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 BMP2KQ9NSY1 1161 aaPredicted RBP19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 CCDC178Q5BJE1 867 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 RTCBQ9Y3I0 505 aaKnown RBP19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 MYOM2P54296 1465 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 ZNF213O14771 459 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 EPS15P42566 896 aa19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 ZNF444Q8N0Y2 327 aaPredicted RBP19.74■□□□□ 0.75
PCDHA13-202ENST00000409494 DDX21Q9NR30 783 aaKnown RBP eCLIP19.73■□□□□ 0.75
PCDHA13-202ENST00000409494 CTCFLQ8NI51 663 aaPredicted RBP19.73■□□□□ 0.75
PCDHA13-202ENST00000409494 UTP14AQ9BVJ6 771 aaKnown RBP19.73■□□□□ 0.75
PCDHA13-202ENST00000409494 ATP8B2P98198 1209 aa19.73■□□□□ 0.75
PCDHA13-202ENST00000409494 CCDC8Q9H0W5 538 aaPredicted RBP19.73■□□□□ 0.75
PCDHA13-202ENST00000409494 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
PCDHA13-202ENST00000409494 ATP5J2-PTCD1G3V325 749 aa19.72■□□□□ 0.75
PCDHA13-202ENST00000409494 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
PCDHA13-202ENST00000409494 ATP2B1P20020 1258 aa19.72■□□□□ 0.75
PCDHA13-202ENST00000409494 BTG4Q9NY30 223 aa19.72■□□□□ 0.75
PCDHA13-202ENST00000409494 PTPRTO14522 1441 aa19.72■□□□□ 0.75
PCDHA13-202ENST00000409494 KRT18P05783 430 aaKnown RBP19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 PHAXQ9H814 394 aaKnown RBP19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 TRAF1Q13077 416 aa19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 RHPN1Q8TCX5 695 aa19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 IL13P35225 146 aa19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 MAGEC2Q9UBF1 373 aaPredicted RBP19.71■□□□□ 0.75
PCDHA13-202ENST00000409494 PARP10Q53GL7 1025 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 VAMP4O75379 141 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 OFD1O75665 1012 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 CASTP20810 708 aaKnown RBP19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 FBLN1P23142 703 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 LTKP29376 864 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 ARHGAP31Q2M1Z3 1444 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 DZIP3Q86Y13 1208 aaKnown RBP19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 TSPY26PQ9H489 355 aa19.7■□□□□ 0.74
PCDHA13-202ENST00000409494 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
PCDHA13-202ENST00000409494 NPHP4O75161 1426 aaPredicted RBP19.69■□□□□ 0.74
PCDHA13-202ENST00000409494 TBC1D2Q9BYX2 928 aa19.69■□□□□ 0.74
PCDHA13-202ENST00000409494 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
PCDHA13-202ENST00000409494 C8orf58Q8NAV2 365 aa19.69■□□□□ 0.74
PCDHA13-202ENST00000409494 ZNF592Q92610 1267 aa19.69■□□□□ 0.74
PCDHA13-202ENST00000409494 PDE4BQ07343 736 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 IGHDP01880 384 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 HLA-DOAP06340 250 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 ME1P48163 572 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 STK3Q13188 491 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 MINDY4BA8MYZ0 360 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 FIBPO43427 364 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 SMARCA5O60264 1052 aaPredicted RBP19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 ATP2B3Q16720 1220 aa19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 NIP7Q9Y221 180 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCDHA13-202ENST00000409494 TNIP1Q15025 636 aa19.67■□□□□ 0.74
PCDHA13-202ENST00000409494 PRPF40BQ6NWY9 871 aaKnown RBP19.67■□□□□ 0.74
PCDHA13-202ENST00000409494 ANKRD2Q9GZV1 360 aa19.67■□□□□ 0.74
PCDHA13-202ENST00000409494 UGGT1Q9NYU2 1555 aa19.67■□□□□ 0.74
PCDHA13-202ENST00000409494 CCDC12Q8WUD4 166 aaPredicted RBP19.67■□□□□ 0.74
PCDHA13-202ENST00000409494 CRNKL1Q9BZJ0 848 aaKnown RBP19.67■□□□□ 0.74
PCDHA13-202ENST00000409494 CCDC192P0DO97 292 aa19.66■□□□□ 0.74
PCDHA13-202ENST00000409494 SMARCE1Q969G3 411 aa19.66■□□□□ 0.74
PCDHA13-202ENST00000409494 CCP110O43303 1012 aa19.66■□□□□ 0.74
PCDHA13-202ENST00000409494 KIF5BP33176 963 aa19.66■□□□□ 0.74
PCDHA13-202ENST00000409494 EHMT1Q9H9B1 1298 aa19.66■□□□□ 0.74
PCDHA13-202ENST00000409494 ERVK-7P63135 1459 aa19.66■□□□□ 0.74
PCDHA13-202ENST00000409494 MYO1BO43795 1136 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 RTL1A6NKG5 1358 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 TTC41PQ6P2S7 1318 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 ESPNB1AK53 854 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 ACSBG1Q96GR2 724 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 MAP7D2Q96T17 732 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 GPS2Q13227 327 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 LIMCH1Q9UPQ0 1083 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 POLD1P28340 1107 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 TTC22Q5TAA0 569 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 LMBR1LQ6UX01 489 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 TMTC2Q8N394 836 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
PCDHA13-202ENST00000409494 NUCB1Q02818 461 aa19.64■□□□□ 0.74
PCDHA13-202ENST00000409494 RAB34Q9BZG1 259 aa19.64■□□□□ 0.74
PCDHA13-202ENST00000409494 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 CATIPQ7Z7H3 387 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 TXLNBQ8N3L3 684 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 CABP5Q9NP86 173 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 ZNF622Q969S3 477 aaKnown RBP eCLIP19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 SPATA32Q96LK8 384 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 SCAND2PQ9GZW5 306 aaPredicted RBP19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 MTERF4Q7Z6M4 381 aaKnown RBP19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 EYA3Q99504 573 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 SLC12A7Q9Y666 1083 aa19.64■□□□□ 0.73
PCDHA13-202ENST00000409494 ERVV-2B6SEH9 535 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 ZNF76P36508 570 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms