RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
LIMS2-204ENST00000409286 NBPF26B4DH59 902 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 NBPF14Q5TI25 921 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 NBPF10Q6P3W6 841 aaKnown RBP23.73■■□□□ 1.39
LIMS2-204ENST00000409286 NBPF15Q8N660 670 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 USP42Q9H9J4 1324 aaKnown RBP23.73■■□□□ 1.39
LIMS2-204ENST00000409286 COL15A1P39059 1388 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 PIP4K2AP48426 406 aaPredicted RBP23.73■■□□□ 1.39
LIMS2-204ENST00000409286 NFKBIBQ15653 356 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 TSHZ3Q63HK5 1081 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 NUTM1Q86Y26 1132 aa23.73■■□□□ 1.39
LIMS2-204ENST00000409286 PHLPP1O60346 1717 aa23.71■■□□□ 1.39
LIMS2-204ENST00000409286 CLASRPQ8N2M8 674 aaKnown RBP23.71■■□□□ 1.39
LIMS2-204ENST00000409286 TRIM6-TRIM34B2RNG4 842 aa23.7■■□□□ 1.39
LIMS2-204ENST00000409286 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.39
LIMS2-204ENST00000409286 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.39
LIMS2-204ENST00000409286 TTC41PQ6P2S7 1318 aa23.7■■□□□ 1.38
LIMS2-204ENST00000409286 TUBGCP6Q96RT7 1819 aa23.7■■□□□ 1.38
LIMS2-204ENST00000409286 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.38
LIMS2-204ENST00000409286 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
LIMS2-204ENST00000409286 G3BP1Q13283 466 aaKnown RBP eCLIP23.7■■□□□ 1.38
LIMS2-204ENST00000409286 RABEP1Q15276 862 aa23.7■■□□□ 1.38
LIMS2-204ENST00000409286 PI4K2BQ8TCG2 481 aa23.7■■□□□ 1.38
LIMS2-204ENST00000409286 SLKQ9H2G2 1235 aaPredicted RBP23.7■■□□□ 1.38
LIMS2-204ENST00000409286 CHMLP26374 656 aa23.69■■□□□ 1.38
LIMS2-204ENST00000409286 RILPL2Q969X0 211 aa23.69■■□□□ 1.38
LIMS2-204ENST00000409286 PLCH1Q4KWH8 1693 aa23.69■■□□□ 1.38
LIMS2-204ENST00000409286 TOM1O60784 492 aa23.68■■□□□ 1.38
LIMS2-204ENST00000409286 A1BGP04217 495 aa23.68■■□□□ 1.38
LIMS2-204ENST00000409286 ESYT1Q9BSJ8 1104 aa23.68■■□□□ 1.38
LIMS2-204ENST00000409286 PA2G4Q9UQ80 394 aaKnown RBP23.68■■□□□ 1.38
LIMS2-204ENST00000409286 TOGARAM1Q9Y4F4 1720 aa23.68■■□□□ 1.38
LIMS2-204ENST00000409286 EXOC5O00471 708 aa23.67■■□□□ 1.38
LIMS2-204ENST00000409286 PIGBQ92521 554 aa23.67■■□□□ 1.38
LIMS2-204ENST00000409286 CDCA7Q9BWT1 371 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-204ENST00000409286 ARFGEF2Q9Y6D5 1785 aa23.66■■□□□ 1.38
LIMS2-204ENST00000409286 RABL6Q3YEC7 729 aaPredicted RBP23.66■■□□□ 1.38
LIMS2-204ENST00000409286 GPATCH3Q96I76 525 aa23.66■■□□□ 1.38
LIMS2-204ENST00000409286 EPB41L2O43491 1005 aaKnown RBP23.65■■□□□ 1.38
LIMS2-204ENST00000409286 GLRX3O76003 335 aaKnown RBP23.65■■□□□ 1.38
LIMS2-204ENST00000409286 TTLL7Q6ZT98 887 aa23.65■■□□□ 1.38
LIMS2-204ENST00000409286 A0A087WZG4 1122 aa23.64■■□□□ 1.38
LIMS2-204ENST00000409286 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.38
LIMS2-204ENST00000409286 CASP7P55210 303 aa23.64■■□□□ 1.38
LIMS2-204ENST00000409286 EPHA10Q5JZY3 1008 aa23.64■■□□□ 1.38
LIMS2-204ENST00000409286 UNC5CLQ8IV45 518 aa23.64■■□□□ 1.38
LIMS2-204ENST00000409286 ATG3Q9NT62 314 aa23.64■■□□□ 1.38
LIMS2-204ENST00000409286 H7C1W4 665 aa23.64■■□□□ 1.37
LIMS2-204ENST00000409286 IFIT2P09913 472 aaKnown RBP23.64■■□□□ 1.37
LIMS2-204ENST00000409286 CNTROBQ8N137 903 aa23.64■■□□□ 1.37
LIMS2-204ENST00000409286 COPRSQ9NQ92 184 aa23.64■■□□□ 1.37
LIMS2-204ENST00000409286 ECHDC1Q9NTX5 307 aa23.64■■□□□ 1.37
LIMS2-204ENST00000409286 THRAP3Q9Y2W1 955 aaKnown RBP23.64■■□□□ 1.37
LIMS2-204ENST00000409286 LRP6O75581 1613 aa23.63■■□□□ 1.37
LIMS2-204ENST00000409286 SASH1O94885 1247 aa23.63■■□□□ 1.37
LIMS2-204ENST00000409286 UBE3BQ7Z3V4 1068 aa23.63■■□□□ 1.37
LIMS2-204ENST00000409286 RBM42Q9BTD8 480 aaKnown RBP23.63■■□□□ 1.37
LIMS2-204ENST00000409286 CWC25Q9NXE8 425 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-204ENST00000409286 CHMP5Q9NZZ3 219 aa23.63■■□□□ 1.37
LIMS2-204ENST00000409286 ASAP1Q9ULH1 1129 aa23.63■■□□□ 1.37
LIMS2-204ENST00000409286 K7ELQ4 463 aaPredicted RBP23.61■■□□□ 1.37
LIMS2-204ENST00000409286 CCDC191Q8NCU4 936 aa23.61■■□□□ 1.37
LIMS2-204ENST00000409286 AFDNP55196 1824 aaKnown RBP23.61■■□□□ 1.37
LIMS2-204ENST00000409286 BCL9O00512 1426 aa23.61■■□□□ 1.37
LIMS2-204ENST00000409286 STARD3NLO95772 234 aa23.6■■□□□ 1.37
LIMS2-204ENST00000409286 RFX5P48382 616 aaPredicted RBP23.6■■□□□ 1.37
LIMS2-204ENST00000409286 SPRYD3Q8NCJ5 442 aa23.6■■□□□ 1.37
LIMS2-204ENST00000409286 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
LIMS2-204ENST00000409286 AACSQ86V21 672 aa23.6■■□□□ 1.37
LIMS2-204ENST00000409286 MCCP23508 829 aa23.59■■□□□ 1.37
LIMS2-204ENST00000409286 DNAJC10Q8IXB1 793 aa23.59■■□□□ 1.37
LIMS2-204ENST00000409286 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
LIMS2-204ENST00000409286 NUP188Q5SRE5 1749 aa23.59■■□□□ 1.37
LIMS2-204ENST00000409286 FRAT2O75474 233 aaPredicted RBP23.58■■□□□ 1.37
LIMS2-204ENST00000409286 CD2BP2O95400 341 aaKnown RBP23.58■■□□□ 1.37
LIMS2-204ENST00000409286 DDIT3P35638 169 aa23.58■■□□□ 1.37
LIMS2-204ENST00000409286 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
LIMS2-204ENST00000409286 PTPN12Q05209 780 aaKnown RBP23.57■■□□□ 1.36
LIMS2-204ENST00000409286 JARID2Q92833 1246 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-204ENST00000409286 EAF2Q96CJ1 260 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-204ENST00000409286 CIZ1Q9ULV3 898 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-204ENST00000409286 NRAPQ86VF7 1730 aa23.57■■□□□ 1.36
LIMS2-204ENST00000409286 ANAPC15P60006 121 aa23.57■■□□□ 1.36
LIMS2-204ENST00000409286 ISCA1Q9BUE6 129 aa23.57■■□□□ 1.36
LIMS2-204ENST00000409286 SIL1Q9H173 461 aa23.57■■□□□ 1.36
LIMS2-204ENST00000409286 ZBTB3Q9H5J0 574 aa23.57■■□□□ 1.36
LIMS2-204ENST00000409286 MAP4K4O95819 1239 aaPredicted RBP23.56■■□□□ 1.36
LIMS2-204ENST00000409286 FOXO4P98177 505 aa23.56■■□□□ 1.36
LIMS2-204ENST00000409286 TRIM28Q13263 835 aaKnown RBP23.56■■□□□ 1.36
LIMS2-204ENST00000409286 IL17RAQ96F46 866 aa23.56■■□□□ 1.36
LIMS2-204ENST00000409286 ITGB4P16144 1822 aa23.56■■□□□ 1.36
LIMS2-204ENST00000409286 NWD2Q9ULI1 1742 aa23.56■■□□□ 1.36
LIMS2-204ENST00000409286 ST18O60284 1047 aa23.55■■□□□ 1.36
LIMS2-204ENST00000409286 TCIRG1Q13488 830 aa23.55■■□□□ 1.36
LIMS2-204ENST00000409286 ANO2Q9NQ90 1003 aa23.55■■□□□ 1.36
LIMS2-204ENST00000409286 KIF6Q6ZMV9 814 aa23.54■■□□□ 1.36
LIMS2-204ENST00000409286 IL27Q8NEV9 243 aa23.54■■□□□ 1.36
LIMS2-204ENST00000409286 KLHDC4Q8TBB5 520 aa23.54■■□□□ 1.36
LIMS2-204ENST00000409286 EVI5LQ96CN4 794 aa23.54■■□□□ 1.36
LIMS2-204ENST00000409286 SGSM2O43147 1006 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms