RNA–Protein interactions for RNA: ENST00000409127.1

CCDC115-202, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2 BASIC

Gene CCDC115, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-202ENST00000409127 TSR2Q969E8 191 aaKnown RBP28.29■■■□□ 2.12
CCDC115-202ENST00000409127 MYH16Q9H6N6 1097 aa28.29■■■□□ 2.12
CCDC115-202ENST00000409127 GOLGA2Q08379 1002 aa28.28■■■□□ 2.12
CCDC115-202ENST00000409127 HYPKQ9NX55 129 aa28.28■■■□□ 2.12
CCDC115-202ENST00000409127 LAMB4A4D0S4 1761 aa28.27■■■□□ 2.12
CCDC115-202ENST00000409127 CCDC30Q5VVM6 783 aa28.27■■■□□ 2.12
CCDC115-202ENST00000409127 TTLL7Q6ZT98 887 aa28.27■■■□□ 2.12
CCDC115-202ENST00000409127 CHPF2Q9P2E5 772 aa28.27■■■□□ 2.12
CCDC115-202ENST00000409127 NIP7Q9Y221 180 aaKnown RBP eCLIP28.27■■■□□ 2.12
CCDC115-202ENST00000409127 C8orf58Q8NAV2 365 aa28.26■■■□□ 2.11
CCDC115-202ENST00000409127 C10orf71Q711Q0 1435 aa28.26■■■□□ 2.11
CCDC115-202ENST00000409127 COPS6Q7L5N1 327 aa28.25■■■□□ 2.11
CCDC115-202ENST00000409127 ZBTB3Q9H5J0 574 aa28.25■■■□□ 2.11
CCDC115-202ENST00000409127 GRIN3BO60391 1043 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 ANXA1P04083 346 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 AIMP1Q12904 312 aaKnown RBP28.24■■■□□ 2.11
CCDC115-202ENST00000409127 HLFQ16534 295 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 PROSER3Q2NL68 480 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 TPTE2Q6XPS3 522 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 NBPF5PQ86XG9 351 aaPredicted RBP28.24■■■□□ 2.11
CCDC115-202ENST00000409127 CNBD1Q8NA66 436 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 XAGE3Q8WTP9 111 aa28.24■■■□□ 2.11
CCDC115-202ENST00000409127 ST5P78524 1137 aa28.23■■■□□ 2.11
CCDC115-202ENST00000409127 LRP10Q7Z4F1 713 aa28.23■■■□□ 2.11
CCDC115-202ENST00000409127 PDZRN3Q9UPQ7 1066 aa28.23■■■□□ 2.11
CCDC115-202ENST00000409127 TWISTNBQ3B726 338 aaPredicted RBP28.22■■■□□ 2.11
CCDC115-202ENST00000409127 HSP90AB3PQ58FF7 597 aa28.22■■■□□ 2.11
CCDC115-202ENST00000409127 GIGYF2Q6Y7W6 1299 aaKnown RBP28.22■■■□□ 2.11
CCDC115-202ENST00000409127 FANCIQ9NVI1 1328 aa28.21■■■□□ 2.11
CCDC115-202ENST00000409127 A0A0G2JLW4 131 aa28.21■■■□□ 2.11
CCDC115-202ENST00000409127 GTF2E1P29083 439 aaPredicted RBP28.21■■■□□ 2.11
CCDC115-202ENST00000409127 STK31Q9BXU1 1019 aa28.21■■■□□ 2.11
CCDC115-202ENST00000409127 DPEP1P16444 411 aa28.2■■■□□ 2.1
CCDC115-202ENST00000409127 PDE6BP35913 854 aa28.2■■■□□ 2.1
CCDC115-202ENST00000409127 BRIP1Q9BX63 1249 aa28.2■■■□□ 2.1
CCDC115-202ENST00000409127 NYXQ9GZU5 481 aa28.2■■■□□ 2.1
CCDC115-202ENST00000409127 PRR5LQ6MZQ0 368 aa28.19■■■□□ 2.1
CCDC115-202ENST00000409127 TSPYL6Q8N831 410 aa28.19■■■□□ 2.1
CCDC115-202ENST00000409127 ANKRD13DQ6ZTN6 518 aa28.18■■■□□ 2.1
CCDC115-202ENST00000409127 PIM2Q9P1W9 311 aa28.18■■■□□ 2.1
CCDC115-202ENST00000409127 SCN7AQ01118 1682 aa28.18■■■□□ 2.1
CCDC115-202ENST00000409127 H0YIN7 160 aa28.17■■■□□ 2.1
CCDC115-202ENST00000409127 PARP10Q53GL7 1025 aa28.17■■■□□ 2.1
CCDC115-202ENST00000409127 PLBD2Q8NHP8 589 aa28.16■■■□□ 2.1
CCDC115-202ENST00000409127 ZNF521Q96K83 1311 aa28.16■■■□□ 2.1
CCDC115-202ENST00000409127 PXDNLA1KZ92 1463 aa28.15■■■□□ 2.1
CCDC115-202ENST00000409127 FAM177BA6PVY3 158 aa28.15■■■□□ 2.1
CCDC115-202ENST00000409127 E9PSI1 815 aa28.15■■■□□ 2.1
CCDC115-202ENST00000409127 DDX58O95786 925 aaKnown RBP28.15■■■□□ 2.1
CCDC115-202ENST00000409127 GPTP24298 496 aa28.15■■■□□ 2.1
CCDC115-202ENST00000409127 PPP1R42Q7Z4L9 355 aa28.15■■■□□ 2.1
CCDC115-202ENST00000409127 ATP10DQ9P241 1426 aa28.15■■■□□ 2.1
CCDC115-202ENST00000409127 EXOSC9Q06265 439 aaKnown RBP28.14■■■□□ 2.1
CCDC115-202ENST00000409127 C2CD5Q86YS7 1000 aa28.14■■■□□ 2.1
CCDC115-202ENST00000409127 ZNF34Q8IZ26 560 aa28.14■■■□□ 2.1
CCDC115-202ENST00000409127 YBX3P16989 372 aaKnown RBP eCLIP28.13■■■□□ 2.092e-8■□□□□ 11.2
CCDC115-202ENST00000409127 CHRNA5P30532 468 aa28.13■■■□□ 2.09
CCDC115-202ENST00000409127 DALRD3Q5D0E6 543 aaKnown RBP28.13■■■□□ 2.09
CCDC115-202ENST00000409127 RIC3Q7Z5B4 369 aa28.13■■■□□ 2.09
CCDC115-202ENST00000409127 SPINK5Q9NQ38 1064 aaPredicted RBP28.13■■■□□ 2.09
CCDC115-202ENST00000409127 BCS1LQ9Y276 419 aa28.13■■■□□ 2.09
CCDC115-202ENST00000409127 TCIRG1Q13488 830 aa28.12■■■□□ 2.09
CCDC115-202ENST00000409127 WWC3Q9ULE0 1092 aa28.12■■■□□ 2.09
CCDC115-202ENST00000409127 KCNA3P22001 575 aa28.11■■■□□ 2.09
CCDC115-202ENST00000409127 BCORQ6W2J9 1755 aa28.1■■■□□ 2.09
CCDC115-202ENST00000409127 VAMP4O75379 141 aa28.1■■■□□ 2.09
CCDC115-202ENST00000409127 CCDC24Q8N4L8 307 aa28.1■■■□□ 2.09
CCDC115-202ENST00000409127 SLC4A2P04920 1241 aa28.09■■■□□ 2.09
CCDC115-202ENST00000409127 UTP14AQ9BVJ6 771 aaKnown RBP28.09■■■□□ 2.09
CCDC115-202ENST00000409127 PHAXQ9H814 394 aaKnown RBP28.09■■■□□ 2.09
CCDC115-202ENST00000409127 SUSD4Q5VX71 490 aa28.08■■■□□ 2.09
CCDC115-202ENST00000409127 IBTKQ9P2D0 1353 aaPredicted RBP28.08■■■□□ 2.09
CCDC115-202ENST00000409127 TTLL6Q8N841 843 aa28.07■■■□□ 2.08
CCDC115-202ENST00000409127 ZNF622Q969S3 477 aaKnown RBP eCLIP28.07■■■□□ 2.08
CCDC115-202ENST00000409127 RNF123Q5XPI4 1314 aa28.07■■■□□ 2.08
CCDC115-202ENST00000409127 KIF13BQ9NQT8 1826 aa28.06■■■□□ 2.08
CCDC115-202ENST00000409127 SLFN5Q08AF3 891 aa28.06■■■□□ 2.08
CCDC115-202ENST00000409127 UBN2Q6ZU65 1347 aa28.06■■■□□ 2.08
CCDC115-202ENST00000409127 NRXN2Q9P2S2 1712 aa28.06■■■□□ 2.08
CCDC115-202ENST00000409127 TCERG1O14776 1098 aaKnown RBP28.05■■■□□ 2.08
CCDC115-202ENST00000409127 NLRP10Q86W26 655 aa28.05■■■□□ 2.08
CCDC115-202ENST00000409127 CNKSR1Q969H4 720 aa28.05■■■□□ 2.08
CCDC115-202ENST00000409127 STYK1Q6J9G0 422 aa28.04■■■□□ 2.08
CCDC115-202ENST00000409127 NUTM1Q86Y26 1132 aa28.04■■■□□ 2.08
CCDC115-202ENST00000409127 MASTLQ96GX5 879 aa28.04■■■□□ 2.08
CCDC115-202ENST00000409127 YY1P25490 414 aa28.03■■■□□ 2.08
CCDC115-202ENST00000409127 ERFEQ4G0M1 354 aa28.03■■■□□ 2.08
CCDC115-202ENST00000409127 TRMT112Q9UI30 125 aaKnown RBP28.03■■■□□ 2.08
CCDC115-202ENST00000409127 KLRG2A4D1S0 409 aaPredicted RBP28.02■■■□□ 2.08
CCDC115-202ENST00000409127 NTSR2O95665 410 aa28.02■■■□□ 2.08
CCDC115-202ENST00000409127 SRGNP10124 158 aa28.02■■■□□ 2.08
CCDC115-202ENST00000409127 NPR1P16066 1061 aa28.02■■■□□ 2.08
CCDC115-202ENST00000409127 TRIM28Q13263 835 aaKnown RBP28.02■■■□□ 2.08
CCDC115-202ENST00000409127 KSR2Q6VAB6 950 aa28.02■■■□□ 2.08
CCDC115-202ENST00000409127 NEXNQ0ZGT2 675 aa28.01■■■□□ 2.07
CCDC115-202ENST00000409127 ARHGAP27Q6ZUM4 889 aa28.01■■■□□ 2.07
CCDC115-202ENST00000409127 NLRP3Q96P20 1036 aa28.01■■■□□ 2.07
CCDC115-202ENST00000409127 ISCA1Q9BUE6 129 aa28.01■■■□□ 2.07
CCDC115-202ENST00000409127 AFDNP55196 1824 aaKnown RBP28■■■□□ 2.07
CCDC115-202ENST00000409127 SH3TC1Q8TE82 1336 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms