RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 CASZ1Q86V15 1759 aa0.45□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 RGPD1P0DJD0 1748 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NUP188Q5SRE5 1749 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MAP3K1Q13233 1512 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MAP1AP78559 2803 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SVEP1Q4LDE5 3571 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CAMSAP2Q08AD1 1489 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FGD5Q6ZNL6 1462 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LOC100653049A0A140TA62 436 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FAM205CA6NFA0 338 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KIAA1324LA8MWY0 1029 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PPP1R15AO75807 674 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRT34O76011 436 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 VEGFAP15692 232 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FBLN1P23142 703 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ECE1P42892 770 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ATXN1P54253 815 aaKnown RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRT83P78385 493 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GRIN2CQ14957 1233 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CCDC85BQ15834 202 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PKN2Q16513 984 aaKnown RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 COL28A1Q2UY09 1125 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PHF19Q5T6S3 580 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRT40Q6A162 431 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LARP1Q6PKG0 1096 aaKnown RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TDHQ8IZJ6 230 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ZNF843Q8N446 348 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KDF1Q8NAX2 398 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PMFBP1Q8TBY8 1022 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PI4K2BQ8TCG2 481 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SLC39A7Q92504 469 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HINFPQ9BQA5 517 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FSD1Q9BTV5 496 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 BCL11BQ9C0K0 894 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 IRF2BPLQ9H1B7 796 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SEMA6BQ9H3T3 888 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HSPBP1Q9NZL4 362 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 USP35Q9P2H5 1018 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NXF1Q9UBU9 619 aaKnown RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HDAC9Q9UKV0 1011 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 BCS1LQ9Y276 419 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 COL22A1Q8NFW1 1626 aaPredicted RBP0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ABCC5O15440 1437 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MIA2Q96PC5 1412 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 COL18A1P39060 1754 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 IGF2RP11717 2491 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ADGRB2O60241 1585 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HIVEP3Q5T1R4 2406 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LAMA1P25391 3075 aa0.44□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SHPRHQ149N8 1683 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TTC21AQ8NDW8 1320 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 COL2A1P02458 1487 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CFTRP13569 1480 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TARBP1Q13395 1621 aaKnown RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 WTIPA6NIX2 430 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRTAP4-16G5E9R7 235 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 IGF2BP3O00425 579 aaKnown RBP eCLIP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TRIM66O15016 1216 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ZBTB7BO15156 539 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SPRY1O43609 319 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KDM4AO75164 1064 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MAP4K4O95819 1239 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ALADP13716 330 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SMPD1P17405 629 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 IL4RP24394 825 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 POLD1P28340 1107 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CSTF2P33240 577 aaKnown RBP eCLIP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 BMP8BP34820 402 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MAP2K2P36507 400 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LTBRP36941 435 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HNRNPMP52272 730 aaKnown RBP eCLIP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TFF2Q03403 129 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MKRN4PQ13434 485 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NFYCQ13952 458 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 C9orf131Q5VYM1 1079 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 INTS3Q68E01 1043 aaKnown RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CIAPIN1Q6FI81 312 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRTAP5-7Q6L8G8 165 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PRPF40BQ6NWY9 871 aaKnown RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FBXO46Q6PJ61 603 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 POTEEQ6S8J3 1075 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SAMD7Q7Z3H4 446 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FRMD5Q7Z6J6 570 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FAM181AQ8N9Y4 354 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KCNG4Q8TDN1 519 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GTF3C2Q8WUA4 911 aaPredicted RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ZCCHC14Q8WYQ9 949 aaKnown RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LRIG1Q96JA1 1093 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 STRN4Q9NRL3 753 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 EMILIN1Q9Y6C2 1016 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 AKAP9Q99996 3911 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SPHKAPQ2M3C7 1700 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KIAA0586Q9BVV6 1533 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ZC3H13Q5T200 1668 aaKnown RBP0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 RREB1Q92766 1687 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HIVEP1P15822 2718 aa0.43□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MGAM2Q2M2H8 2515 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PAPPA2Q9BXP8 1791 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GRIN2BQ13224 1484 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms