RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 SENP3-EIF4A1A0A087X0R7 540 aa34.36■■■■□ 3.09
HDAC11-206ENST00000405025 COL11A2P13942 1736 aaPredicted RBP34.35■■■■□ 3.09
HDAC11-206ENST00000405025 ERBB4Q15303 1308 aa34.35■■■■□ 3.09
HDAC11-206ENST00000405025 PDIA6Q15084 440 aa34.35■■■■□ 3.09
HDAC11-206ENST00000405025 PROSER3Q2NL68 480 aa34.34■■■■□ 3.09
HDAC11-206ENST00000405025 DALRD3Q5D0E6 543 aaKnown RBP34.34■■■■□ 3.09
HDAC11-206ENST00000405025 C2CD5Q86YS7 1000 aa34.34■■■■□ 3.09
HDAC11-206ENST00000405025 NECTIN2Q92692 538 aa34.34■■■■□ 3.09
HDAC11-206ENST00000405025 NUP98P52948 1817 aa34.33■■■■□ 3.09
HDAC11-206ENST00000405025 LRP10Q7Z4F1 713 aa34.33■■■■□ 3.09
HDAC11-206ENST00000405025 CNBD1Q8NA66 436 aa34.33■■■■□ 3.09
HDAC11-206ENST00000405025 CFAP44Q96MT7 982 aa34.33■■■■□ 3.09
HDAC11-206ENST00000405025 RGL2O15211 777 aa34.32■■■■□ 3.08
HDAC11-206ENST00000405025 ANXA1P04083 346 aa34.32■■■■□ 3.08
HDAC11-206ENST00000405025 NIP7Q9Y221 180 aaKnown RBP eCLIP34.32■■■■□ 3.08
HDAC11-206ENST00000405025 MAP3K15Q6ZN16 1313 aa34.31■■■■□ 3.08
HDAC11-206ENST00000405025 MBIPQ9NS73 344 aa34.31■■■■□ 3.08
HDAC11-206ENST00000405025 ZNF853P0CG23 659 aa34.3■■■■□ 3.08
HDAC11-206ENST00000405025 ARHGAP27Q6ZUM4 889 aa34.3■■■■□ 3.08
HDAC11-206ENST00000405025 BRIP1Q9BX63 1249 aa34.3■■■■□ 3.08
HDAC11-206ENST00000405025 ADCY9O60503 1353 aa34.3■■■■□ 3.08
HDAC11-206ENST00000405025 KIF6Q6ZMV9 814 aa34.29■■■■□ 3.08
HDAC11-206ENST00000405025 NBPF5PQ86XG9 351 aaPredicted RBP34.29■■■■□ 3.08
HDAC11-206ENST00000405025 ZBTB3Q9H5J0 574 aa34.29■■■■□ 3.08
HDAC11-206ENST00000405025 ERVV-1B6SEH8 477 aa34.28■■■■□ 3.08
HDAC11-206ENST00000405025 NPHP1O15259 732 aa34.28■■■■□ 3.08
HDAC11-206ENST00000405025 FAM177BA6PVY3 158 aa34.27■■■■□ 3.08
HDAC11-206ENST00000405025 H0YIN7 160 aa34.27■■■■□ 3.08
HDAC11-206ENST00000405025 ATP10DQ9P241 1426 aa34.27■■■■□ 3.08
HDAC11-206ENST00000405025 ST5P78524 1137 aa34.26■■■■□ 3.08
HDAC11-206ENST00000405025 IFT57Q9NWB7 429 aa34.26■■■■□ 3.08
HDAC11-206ENST00000405025 PDE6BP35913 854 aa34.25■■■■□ 3.07
HDAC11-206ENST00000405025 GNAI1P63096 354 aa34.22■■■■□ 3.07
HDAC11-206ENST00000405025 CALD1Q05682 793 aaKnown RBP34.22■■■■□ 3.07
HDAC11-206ENST00000405025 TTLL6Q8N841 843 aa34.22■■■■□ 3.07
HDAC11-206ENST00000405025 GPTP24298 496 aa34.21■■■■□ 3.07
HDAC11-206ENST00000405025 HDGFL1Q5TGJ6 251 aa34.21■■■■□ 3.07
HDAC11-206ENST00000405025 DUSP27Q5VZP5 1158 aa34.21■■■■□ 3.07
HDAC11-206ENST00000405025 ZNF622Q969S3 477 aaKnown RBP eCLIP34.21■■■■□ 3.07
HDAC11-206ENST00000405025 CHPF2Q9P2E5 772 aa34.21■■■■□ 3.07
HDAC11-206ENST00000405025 UBN2Q6ZU65 1347 aa34.21■■■■□ 3.07
HDAC11-206ENST00000405025 HOXB7P09629 217 aa34.2■■■■□ 3.07
HDAC11-206ENST00000405025 TPTE2Q6XPS3 522 aa34.2■■■■□ 3.07
HDAC11-206ENST00000405025 DDX21Q9NR30 783 aaKnown RBP eCLIP34.2■■■■□ 3.07
HDAC11-206ENST00000405025 TNRC6CQ9HCJ0 1690 aaKnown RBP34.19■■■■□ 3.06
HDAC11-206ENST00000405025 CACNA1SQ13698 1873 aa34.19■■■■□ 3.06
HDAC11-206ENST00000405025 GIGYF2Q6Y7W6 1299 aaKnown RBP34.19■■■■□ 3.06
HDAC11-206ENST00000405025 XAGE3Q8WTP9 111 aa34.19■■■■□ 3.06
HDAC11-206ENST00000405025 PDZRN3Q9UPQ7 1066 aa34.19■■■■□ 3.06
HDAC11-206ENST00000405025 AIMP1Q12904 312 aaKnown RBP34.18■■■■□ 3.06
HDAC11-206ENST00000405025 COPS6Q7L5N1 327 aa34.18■■■■□ 3.06
HDAC11-206ENST00000405025 SRGNP10124 158 aa34.17■■■■□ 3.06
HDAC11-206ENST00000405025 CCDC27Q2M243 656 aa34.17■■■■□ 3.06
HDAC11-206ENST00000405025 ZNF34Q8IZ26 560 aa34.17■■■■□ 3.06
HDAC11-206ENST00000405025 ABCC12Q96J65 1359 aa34.17■■■■□ 3.06
HDAC11-206ENST00000405025 NUTM1Q86Y26 1132 aa34.16■■■■□ 3.06
HDAC11-206ENST00000405025 WWC1Q8IX03 1113 aa34.16■■■■□ 3.06
HDAC11-206ENST00000405025 SBF1O95248 1867 aa34.15■■■■□ 3.06
HDAC11-206ENST00000405025 ANKRD36CQ5JPF3 1778 aa34.15■■■■□ 3.06
HDAC11-206ENST00000405025 SLX4Q8IY92 1834 aa34.14■■■■□ 3.06
HDAC11-206ENST00000405025 ARFGEF2Q9Y6D5 1785 aa34.14■■■■□ 3.06
HDAC11-206ENST00000405025 ELL2O00472 640 aaPredicted RBP34.14■■■■□ 3.06
HDAC11-206ENST00000405025 RASSF7Q02833 373 aa34.14■■■■□ 3.06
HDAC11-206ENST00000405025 SUSD4Q5VX71 490 aa34.14■■■■□ 3.06
HDAC11-206ENST00000405025 ZNF526Q8TF50 670 aaPredicted RBP34.14■■■■□ 3.06
HDAC11-206ENST00000405025 C9orf131Q5VYM1 1079 aa34.13■■■■□ 3.05
HDAC11-206ENST00000405025 STYK1Q6J9G0 422 aa34.13■■■■□ 3.05
HDAC11-206ENST00000405025 C8orf58Q8NAV2 365 aa34.13■■■■□ 3.05
HDAC11-206ENST00000405025 ERFEQ4G0M1 354 aa34.12■■■■□ 3.05
HDAC11-206ENST00000405025 FAM9BQ8IZU0 186 aa34.12■■■■□ 3.05
HDAC11-206ENST00000405025 TSR2Q969E8 191 aaKnown RBP34.12■■■■□ 3.05
HDAC11-206ENST00000405025 MASTLQ96GX5 879 aa34.12■■■■□ 3.05
HDAC11-206ENST00000405025 NYXQ9GZU5 481 aa34.12■■■■□ 3.05
HDAC11-206ENST00000405025 ZNF219Q9P2Y4 722 aaPredicted RBP34.12■■■■□ 3.05
HDAC11-206ENST00000405025 IBTKQ9P2D0 1353 aaPredicted RBP34.11■■■■□ 3.05
HDAC11-206ENST00000405025 KLRG2A4D1S0 409 aaPredicted RBP34.11■■■■□ 3.05
HDAC11-206ENST00000405025 GTF2E1P29083 439 aaPredicted RBP34.11■■■■□ 3.05
HDAC11-206ENST00000405025 DBF4Q9UBU7 674 aaPredicted RBP34.11■■■■□ 3.05
HDAC11-206ENST00000405025 NTSR2O95665 410 aa34.1■■■■□ 3.05
HDAC11-206ENST00000405025 SALL2Q9Y467 1007 aaPredicted RBP34.1■■■■□ 3.05
HDAC11-206ENST00000405025 C21orf2O43822 256 aa34.09■■■■□ 3.05
HDAC11-206ENST00000405025 CNKSR1Q969H4 720 aa34.09■■■■□ 3.05
HDAC11-206ENST00000405025 PRELPP51888 382 aa34.08■■■■□ 3.05
HDAC11-206ENST00000405025 PRPF40BQ6NWY9 871 aaKnown RBP34.08■■■■□ 3.05
HDAC11-206ENST00000405025 TSPYL6Q8N831 410 aa34.08■■■■□ 3.05
HDAC11-206ENST00000405025 NFKBIEO00221 500 aa34.07■■■■□ 3.04
HDAC11-206ENST00000405025 NCBP3Q53F19 620 aaKnown RBP34.07■■■■□ 3.04
HDAC11-206ENST00000405025 RNF181Q9P0P0 153 aa34.07■■■■□ 3.04
HDAC11-206ENST00000405025 NPR1P16066 1061 aa34.06■■■■□ 3.04
HDAC11-206ENST00000405025 GPBP1L1Q9HC44 474 aaPredicted RBP34.06■■■■□ 3.04
HDAC11-206ENST00000405025 FER1L6Q2WGJ9 1857 aa34.05■■■■□ 3.04
HDAC11-206ENST00000405025 PARP10Q53GL7 1025 aa34.05■■■■□ 3.04
HDAC11-206ENST00000405025 HYPKQ9NX55 129 aa34.04■■■■□ 3.04
HDAC11-206ENST00000405025 RIC1Q4ADV7 1423 aa34.04■■■■□ 3.04
HDAC11-206ENST00000405025 CCDC88AQ3V6T2 1871 aa34.03■■■■□ 3.04
HDAC11-206ENST00000405025 TCIRG1Q13488 830 aa34.03■■■■□ 3.04
HDAC11-206ENST00000405025 PPP1R42Q7Z4L9 355 aa34.03■■■■□ 3.04
HDAC11-206ENST00000405025 PLBD2Q8NHP8 589 aa34.03■■■■□ 3.04
HDAC11-206ENST00000405025 IL16Q14005 1332 aa34.03■■■■□ 3.04
HDAC11-206ENST00000405025 CRY2Q49AN0 593 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms