RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 PIP4K2AP48426 406 aaPredicted RBP23.27■■□□□ 1.32
THUMPD2-202ENST00000403537 ST5P78524 1137 aa23.27■■□□□ 1.32
THUMPD2-202ENST00000403537 CNBD1Q8NA66 436 aa23.27■■□□□ 1.32
THUMPD2-202ENST00000403537 C2CD5Q86YS7 1000 aa23.26■■□□□ 1.31
THUMPD2-202ENST00000403537 LAMB4A4D0S4 1761 aa23.25■■□□□ 1.31
THUMPD2-202ENST00000403537 ERVV-1B6SEH8 477 aa23.25■■□□□ 1.31
THUMPD2-202ENST00000403537 PRR5LQ6MZQ0 368 aa23.25■■□□□ 1.31
THUMPD2-202ENST00000403537 TTLL6Q8N841 843 aa23.25■■□□□ 1.31
THUMPD2-202ENST00000403537 ADCY9O60503 1353 aa23.25■■□□□ 1.31
THUMPD2-202ENST00000403537 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
THUMPD2-202ENST00000403537 CHL1O00533 1208 aa23.24■■□□□ 1.31
THUMPD2-202ENST00000403537 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
THUMPD2-202ENST00000403537 KIF6Q6ZMV9 814 aa23.24■■□□□ 1.31
THUMPD2-202ENST00000403537 AFDNP55196 1824 aaKnown RBP23.24■■□□□ 1.31
THUMPD2-202ENST00000403537 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
THUMPD2-202ENST00000403537 NBPF5PQ86XG9 351 aaPredicted RBP23.23■■□□□ 1.31
THUMPD2-202ENST00000403537 ZNF521Q96K83 1311 aa23.23■■□□□ 1.31
THUMPD2-202ENST00000403537 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 BRCA1P38398 1863 aaKnown RBP23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 NCBP3Q53F19 620 aaKnown RBP23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 MBIPQ9NS73 344 aa23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 NIP7Q9Y221 180 aaKnown RBP eCLIP23.22■■□□□ 1.31
THUMPD2-202ENST00000403537 CFAP44Q96MT7 982 aa23.21■■□□□ 1.31
THUMPD2-202ENST00000403537 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
THUMPD2-202ENST00000403537 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
THUMPD2-202ENST00000403537 ARFGEF1Q9Y6D6 1849 aa23.2■■□□□ 1.3
THUMPD2-202ENST00000403537 MAP3K15Q6ZN16 1313 aa23.2■■□□□ 1.3
THUMPD2-202ENST00000403537 TSR2Q969E8 191 aaKnown RBP23.2■■□□□ 1.3
THUMPD2-202ENST00000403537 HOXB7P09629 217 aa23.19■■□□□ 1.3
THUMPD2-202ENST00000403537 MYL6BP14649 208 aa23.19■■□□□ 1.3
THUMPD2-202ENST00000403537 NGEFQ8N5V2 710 aa23.19■■□□□ 1.3
THUMPD2-202ENST00000403537 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
THUMPD2-202ENST00000403537 CNKSR1Q969H4 720 aa23.18■■□□□ 1.3
THUMPD2-202ENST00000403537 NYXQ9GZU5 481 aa23.18■■□□□ 1.3
THUMPD2-202ENST00000403537 EIF2S2P20042 333 aaKnown RBP23.17■■□□□ 1.3
THUMPD2-202ENST00000403537 GNAI1P63096 354 aa23.17■■□□□ 1.3
THUMPD2-202ENST00000403537 STYK1Q6J9G0 422 aa23.17■■□□□ 1.3
THUMPD2-202ENST00000403537 ZNF622Q969S3 477 aaKnown RBP eCLIP23.17■■□□□ 1.33e-9■■□□□ 12.8
THUMPD2-202ENST00000403537 IL16Q14005 1332 aa23.16■■□□□ 1.3
THUMPD2-202ENST00000403537 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
THUMPD2-202ENST00000403537 HLFQ16534 295 aa23.16■■□□□ 1.3
THUMPD2-202ENST00000403537 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
THUMPD2-202ENST00000403537 C1QTNF8P60827 252 aa23.15■■□□□ 1.3
THUMPD2-202ENST00000403537 C9orf131Q5VYM1 1079 aa23.15■■□□□ 1.3
THUMPD2-202ENST00000403537 MASTLQ96GX5 879 aa23.15■■□□□ 1.3
THUMPD2-202ENST00000403537 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
THUMPD2-202ENST00000403537 SRGNP10124 158 aa23.14■■□□□ 1.29
THUMPD2-202ENST00000403537 SOGA3Q5TF21 947 aa23.14■■□□□ 1.29
THUMPD2-202ENST00000403537 TTLL7Q6ZT98 887 aa23.14■■□□□ 1.29
THUMPD2-202ENST00000403537 DLEC1Q9Y238 1755 aa23.14■■□□□ 1.29
THUMPD2-202ENST00000403537 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.29
THUMPD2-202ENST00000403537 ZC3H4Q9UPT8 1303 aaKnown RBP23.13■■□□□ 1.29
THUMPD2-202ENST00000403537 GIGYF2Q6Y7W6 1299 aaKnown RBP23.13■■□□□ 1.29
THUMPD2-202ENST00000403537 CCDC24Q8N4L8 307 aa23.13■■□□□ 1.29
THUMPD2-202ENST00000403537 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
THUMPD2-202ENST00000403537 KLRG2A4D1S0 409 aaPredicted RBP23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 NPR1P16066 1061 aa23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 PDIA6Q15084 440 aa23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 CDCA7LQ96GN5 454 aa23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 ZBTB3Q9H5J0 574 aa23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 RNF181Q9P0P0 153 aa23.12■■□□□ 1.29
THUMPD2-202ENST00000403537 LMNB1P20700 586 aa23.11■■□□□ 1.29
THUMPD2-202ENST00000403537 HSP90AB3PQ58FF7 597 aa23.11■■□□□ 1.29
THUMPD2-202ENST00000403537 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
THUMPD2-202ENST00000403537 ZNF526Q8TF50 670 aaPredicted RBP23.11■■□□□ 1.29
THUMPD2-202ENST00000403537 ELL2O00472 640 aaPredicted RBP23.1■■□□□ 1.29
THUMPD2-202ENST00000403537 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
THUMPD2-202ENST00000403537 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
THUMPD2-202ENST00000403537 PPP1R42Q7Z4L9 355 aa23.1■■□□□ 1.29
THUMPD2-202ENST00000403537 ANKRD31Q8N7Z5 1873 aa23.09■■□□□ 1.29
THUMPD2-202ENST00000403537 FAM177BA6PVY3 158 aa23.09■■□□□ 1.29
THUMPD2-202ENST00000403537 ZNF34Q8IZ26 560 aa23.09■■□□□ 1.29
THUMPD2-202ENST00000403537 TSPYL6Q8N831 410 aa23.09■■□□□ 1.29
THUMPD2-202ENST00000403537 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
THUMPD2-202ENST00000403537 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
THUMPD2-202ENST00000403537 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
THUMPD2-202ENST00000403537 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
THUMPD2-202ENST00000403537 DBF4Q9UBU7 674 aaPredicted RBP23.08■■□□□ 1.29
THUMPD2-202ENST00000403537 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.28
THUMPD2-202ENST00000403537 C21orf2O43822 256 aa23.07■■□□□ 1.28
THUMPD2-202ENST00000403537 ALDH1B1P30837 517 aa23.07■■□□□ 1.28
THUMPD2-202ENST00000403537 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
THUMPD2-202ENST00000403537 COPS6Q7L5N1 327 aa23.07■■□□□ 1.28
THUMPD2-202ENST00000403537 RIC1Q4ADV7 1423 aa23.07■■□□□ 1.28
THUMPD2-202ENST00000403537 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
THUMPD2-202ENST00000403537 GPTP24298 496 aa23.06■■□□□ 1.28
THUMPD2-202ENST00000403537 SLFN5Q08AF3 891 aa23.06■■□□□ 1.28
THUMPD2-202ENST00000403537 XAGE3Q8WTP9 111 aa23.06■■□□□ 1.28
THUMPD2-202ENST00000403537 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
THUMPD2-202ENST00000403537 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
THUMPD2-202ENST00000403537 RASSF7Q02833 373 aa23.05■■□□□ 1.28
THUMPD2-202ENST00000403537 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
THUMPD2-202ENST00000403537 CHPF2Q9P2E5 772 aa23.05■■□□□ 1.28
THUMPD2-202ENST00000403537 NFKBIEO00221 500 aa23.04■■□□□ 1.28
THUMPD2-202ENST00000403537 ANXA1P04083 346 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms