RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 NKTRP30414 1462 aaKnown RBP9.61□□□□□ -0.87
CHD8-201ENST00000399982 STIM2Q9P246 746 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
CHD8-201ENST00000399982 ZSCAN23Q3MJ62 389 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 FYCO1Q9BQS8 1478 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 ERCC5P28715 1186 aaPredicted RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 CEP120Q8N960 986 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 SMC1BQ8NDV3 1235 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 SPAG1Q07617 926 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 BMP2KLQ5H9B9 411 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 PUF60Q9UHX1 559 aaKnown RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 EPSTI1Q96J88 318 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 RAB11FIP3O75154 756 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 CACNA2D4Q7Z3S7 1137 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 PPFIBP2Q8ND30 876 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.6□□□□□ -0.879e-7■■■□□ 15.2
CHD8-201ENST00000399982 ZSCAN16Q9H4T2 348 aaPredicted RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.6□□□□□ -0.877e-7■■■■□ 19.7
CHD8-201ENST00000399982 KIF21BO75037 1637 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 NACAP1Q9BZK3 213 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 GNL3LQ9NVN8 582 aaKnown RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 PRPHP41219 470 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 ZNF165P49910 485 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 TCP11L2Q8N4U5 519 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 MYRIPQ8NFW9 859 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 VCXQ9H320 206 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 SUDS3Q9H7L9 328 aaPredicted RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 GPRASP1Q5JY77 1395 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 WDHD1O75717 1129 aaPredicted RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 MAP2K2P36507 400 aa9.6□□□□□ -0.87
CHD8-201ENST00000399982 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 HLTFQ14527 1009 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD8-201ENST00000399982 CWC25Q9NXE8 425 aaPredicted RBP9.6□□□□□ -0.87
CHD8-201ENST00000399982 TACC1O75410 805 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 ALDH1L2Q3SY69 923 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 CCDC110Q8TBZ0 833 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 RPGRIP1LQ68CZ1 1315 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 LRRC45Q96CN5 670 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 NBPF8Q3BBV2 869 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 LIMCH1Q9UPQ0 1083 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
CHD8-201ENST00000399982 CCDC63Q8NA47 563 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 TSPYL4Q9UJ04 414 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 KIF5AQ12840 1032 aa9.59□□□□□ -0.87
CHD8-201ENST00000399982 PDE1CQ14123 709 aaPredicted RBP9.59□□□□□ -0.87
CHD8-201ENST00000399982 LRPPRCP42704 1394 aaKnown RBP9.58□□□□□ -0.88
CHD8-201ENST00000399982 CCDC196A0A1B0GTZ2 297 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 ZBTB17Q13105 803 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CCDC174Q6PII3 467 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 C10orf67Q8IYJ2 551 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CCDC77Q9BR77 488 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 KIF4AO95239 1232 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 MX1P20591 662 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CACNA2D3Q8IZS8 1091 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 FAM76AQ8TAV0 307 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CCDC114Q96M63 670 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 TSG101Q99816 390 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CCDC129Q6ZRS4 1044 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CEP128Q6ZU80 1094 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 GNG11P61952 73 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 ZBTB16Q05516 673 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 TSNAXIP1Q2TAA8 658 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 SEPT14Q6ZU15 432 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 CCDC144CPQ8IYA2 1237 aa9.58□□□□□ -0.88
CHD8-201ENST00000399982 NOP2P46087 812 aaKnown RBP9.58□□□□□ -0.88
CHD8-201ENST00000399982 GBP7Q8N8V2 638 aaPredicted RBP9.58□□□□□ -0.88
CHD8-201ENST00000399982 DACT3Q96B18 629 aaPredicted RBP9.57□□□□□ -0.88
CHD8-201ENST00000399982 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 MAATS1Q7Z4T9 603 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 PFDN4Q9NQP4 134 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 CTAGE9A4FU28 777 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 RFC1P35251 1148 aaPredicted RBP9.57□□□□□ -0.88
CHD8-201ENST00000399982 AP1ARQ63HQ0 302 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
CHD8-201ENST00000399982 RASAL2Q9UJF2 1139 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 ERICH3Q5RHP9 1530 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
CHD8-201ENST00000399982 CCDC172P0C7W6 258 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 CCDC158Q5M9N0 1113 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 SKILP12757 684 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 RBBP5Q15291 538 aaKnown RBP9.57□□□□□ -0.88
CHD8-201ENST00000399982 CEP57Q86XR8 500 aa9.57□□□□□ -0.88
CHD8-201ENST00000399982 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 CYLC1P35663 651 aaPredicted RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 SNX16P57768 344 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 TRMT1LQ7Z2T5 733 aaKnown RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 CCDC89Q8N998 374 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 SLFN5Q08AF3 891 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 TRIM7Q9C029 511 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 GMNNO75496 209 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 ATP11AP98196 1134 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 SMC6Q96SB8 1091 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms