RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 MEIS3Q99687 375 aa17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 RPRD2Q5VT52 1461 aaKnown RBP17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 MATR3P43243 847 aaKnown RBP eCLIP17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 UBE2HP62256 183 aa17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 JARID2Q92833 1246 aaPredicted RBP17.61■□□□□ 0.41
UBXN2B-201ENST00000399598 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 NLRP5P59047 1200 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 NUCB1Q02818 461 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 GIMAP6Q6P9H5 292 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 POLR3GO15318 223 aaPredicted RBP17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 SLC5A1P13866 664 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 STX1AQ16623 288 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 ZNF444Q8N0Y2 327 aaPredicted RBP17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 CRACR2BQ8N4Y2 399 aaPredicted RBP17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
UBXN2B-201ENST00000399598 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 KRI1Q8N9T8 703 aaKnown RBP17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 ANKIB1Q9P2G1 1089 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 NEMFO60524 1076 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 ZSCAN23Q3MJ62 389 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 RHPN1Q8TCX5 695 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 TDRD12Q587J7 1177 aaKnown RBP17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 GSDMDP57764 484 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 PTPN23Q9H3S7 1636 aa17.59■□□□□ 0.41
UBXN2B-201ENST00000399598 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.41
UBXN2B-201ENST00000399598 LUZP1Q86V48 1076 aa17.58■□□□□ 0.41
UBXN2B-201ENST00000399598 TSG101Q99816 390 aa17.58■□□□□ 0.41
UBXN2B-201ENST00000399598 IL16Q14005 1332 aa17.58■□□□□ 0.41
UBXN2B-201ENST00000399598 BRF1Q92994 677 aa17.58■□□□□ 0.41
UBXN2B-201ENST00000399598 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.41
UBXN2B-201ENST00000399598 NOS1P29475 1434 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 CCDC113Q9H0I3 377 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 USP8P40818 1118 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 MAP9Q49MG5 647 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
UBXN2B-201ENST00000399598 YEATS4O95619 227 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 ZPR1O75312 459 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 PAFAH1B1P43034 410 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 CCDC96Q2M329 555 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 IDEP14735 1019 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 MCM5P33992 734 aa17.57■□□□□ 0.4
UBXN2B-201ENST00000399598 PRKCSHP14314 528 aaPredicted RBP17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 VPS36Q86VN1 386 aa17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 NSD2O96028 1365 aa17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 EZRP15311 586 aaKnown RBP17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 PIK3R4Q99570 1358 aa17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 USO1O60763 962 aaKnown RBP17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 ZSCAN22P10073 491 aaPredicted RBP17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 MTIF2P46199 727 aaKnown RBP17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 PDE1AP54750 535 aa17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
UBXN2B-201ENST00000399598 TMEM266Q2M3C6 531 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 LRRC2Q9BYS8 371 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 DYDC1Q8WWB3 177 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 SNW1Q13573 536 aaKnown RBP17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 CCDC102BQ68D86 513 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 HMG20BQ9P0W2 317 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 GBP2P32456 591 aaPredicted RBP17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 CETN2P41208 172 aa17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 METAP2P50579 478 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBXN2B-201ENST00000399598 CCDC178Q5BJE1 867 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 LRSAM1Q6UWE0 723 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 SLC26A6Q9BXS9 759 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 ZSWIM4Q9H7M6 989 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 CWC25Q9NXE8 425 aaPredicted RBP17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 CEBPAP49715 358 aaPredicted RBP17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 FGFR1OPO95684 399 aaKnown RBP17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 XRCC6P12956 609 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 UVSSAQ2YD98 709 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 NCOA7Q8NI08 942 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBXN2B-201ENST00000399598 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
UBXN2B-201ENST00000399598 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
UBXN2B-201ENST00000399598 UBA7P41226 1012 aa17.53■□□□□ 0.4
UBXN2B-201ENST00000399598 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
UBXN2B-201ENST00000399598 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
UBXN2B-201ENST00000399598 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
UBXN2B-201ENST00000399598 IQGAP2Q13576 1575 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms