RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-204ENST00000398519 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
CSNK1D-204ENST00000398519 MAP3K15Q6ZN16 1313 aa22.29■■□□□ 1.16
CSNK1D-204ENST00000398519 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
CSNK1D-204ENST00000398519 NLGN1Q8N2Q7 840 aa22.28■■□□□ 1.16
CSNK1D-204ENST00000398519 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
CSNK1D-204ENST00000398519 SPON1Q9HCB6 807 aa22.28■■□□□ 1.16
CSNK1D-204ENST00000398519 PTGER2P43116 358 aa22.27■■□□□ 1.16
CSNK1D-204ENST00000398519 HLFQ16534 295 aa22.27■■□□□ 1.16
CSNK1D-204ENST00000398519 ZNF428Q96B54 188 aa22.27■■□□□ 1.16
CSNK1D-204ENST00000398519 SGIP1Q9BQI5 828 aa22.27■■□□□ 1.16
CSNK1D-204ENST00000398519 CACNA1FO60840 1977 aa22.26■■□□□ 1.15
CSNK1D-204ENST00000398519 ERVV-1B6SEH8 477 aa22.26■■□□□ 1.15
CSNK1D-204ENST00000398519 G2E3Q7L622 706 aa22.26■■□□□ 1.15
CSNK1D-204ENST00000398519 RGL2O15211 777 aa22.25■■□□□ 1.15
CSNK1D-204ENST00000398519 SSH1Q8WYL5 1049 aa22.25■■□□□ 1.15
CSNK1D-204ENST00000398519 CLEC4GQ6UXB4 293 aa22.25■■□□□ 1.15
CSNK1D-204ENST00000398519 LRP5O75197 1615 aa22.24■■□□□ 1.15
CSNK1D-204ENST00000398519 NUP98P52948 1817 aa22.24■■□□□ 1.15
CSNK1D-204ENST00000398519 ALDH1L2Q3SY69 923 aa22.24■■□□□ 1.15
CSNK1D-204ENST00000398519 TBC1D9BQ66K14 1250 aa22.24■■□□□ 1.15
CSNK1D-204ENST00000398519 ZNF652Q9Y2D9 606 aa22.24■■□□□ 1.15
CSNK1D-204ENST00000398519 ARFGEF2Q9Y6D5 1785 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 MMP10P09238 476 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 TM4SF1P30408 202 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 FLIIQ13045 1269 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 NFIXQ14938 502 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 ANKRD13DQ6ZTN6 518 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 MRPL50Q8N5N7 158 aaKnown RBP22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 PLBD2Q8NHP8 589 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 BCL2L13Q9BXK5 485 aa22.23■■□□□ 1.15
CSNK1D-204ENST00000398519 POLD1P28340 1107 aa22.22■■□□□ 1.15
CSNK1D-204ENST00000398519 GIGYF2Q6Y7W6 1299 aaKnown RBP22.22■■□□□ 1.15
CSNK1D-204ENST00000398519 ATP10DQ9P241 1426 aa22.21■■□□□ 1.15
CSNK1D-204ENST00000398519 RARSP54136 660 aaKnown RBP22.21■■□□□ 1.15
CSNK1D-204ENST00000398519 DDR1Q08345 913 aa22.21■■□□□ 1.15
CSNK1D-204ENST00000398519 BICDL1Q6ZP65 573 aa22.21■■□□□ 1.15
CSNK1D-204ENST00000398519 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
CSNK1D-204ENST00000398519 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
CSNK1D-204ENST00000398519 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
CSNK1D-204ENST00000398519 ADCY9O60503 1353 aa22.2■■□□□ 1.14
CSNK1D-204ENST00000398519 POLRMTO00411 1230 aaKnown RBP22.19■■□□□ 1.14
CSNK1D-204ENST00000398519 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
CSNK1D-204ENST00000398519 RIC3Q7Z5B4 369 aa22.19■■□□□ 1.14
CSNK1D-204ENST00000398519 NIP7Q9Y221 180 aaKnown RBP eCLIP22.19■■□□□ 1.14
CSNK1D-204ENST00000398519 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
CSNK1D-204ENST00000398519 PI4KAP2A4QPH2 592 aa22.18■■□□□ 1.14
CSNK1D-204ENST00000398519 KSR2Q6VAB6 950 aa22.18■■□□□ 1.14
CSNK1D-204ENST00000398519 PI4KAP1Q8N8J0 262 aa22.18■■□□□ 1.14
CSNK1D-204ENST00000398519 SETDB2Q96T68 719 aa22.18■■□□□ 1.14
CSNK1D-204ENST00000398519 ZNF34Q8IZ26 560 aa22.17■■□□□ 1.14
CSNK1D-204ENST00000398519 PARP3Q9Y6F1 533 aa22.17■■□□□ 1.14
CSNK1D-204ENST00000398519 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
CSNK1D-204ENST00000398519 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
CSNK1D-204ENST00000398519 GPTP24298 496 aa22.16■■□□□ 1.14
CSNK1D-204ENST00000398519 TCIRG1Q13488 830 aa22.16■■□□□ 1.14
CSNK1D-204ENST00000398519 MAP3K2Q9Y2U5 619 aa22.16■■□□□ 1.14
CSNK1D-204ENST00000398519 AFDNP55196 1824 aaKnown RBP22.16■■□□□ 1.14
CSNK1D-204ENST00000398519 BRPF1P55201 1214 aaPredicted RBP22.16■■□□□ 1.14
CSNK1D-204ENST00000398519 HSP90AB3PQ58FF7 597 aa22.16■■□□□ 1.14
CSNK1D-204ENST00000398519 BCAR3O75815 825 aa22.15■■□□□ 1.14
CSNK1D-204ENST00000398519 SERPINB2P05120 415 aa22.14■■□□□ 1.13
CSNK1D-204ENST00000398519 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.13
CSNK1D-204ENST00000398519 MYD88Q99836 296 aa22.13■■□□□ 1.13
CSNK1D-204ENST00000398519 ISCA1Q9BUE6 129 aa22.13■■□□□ 1.13
CSNK1D-204ENST00000398519 PTPRCP08575 1304 aa22.13■■□□□ 1.13
CSNK1D-204ENST00000398519 F6X3S4 739 aa22.12■■□□□ 1.13
CSNK1D-204ENST00000398519 ATP5J2-PTCD1G3V325 749 aa22.12■■□□□ 1.13
CSNK1D-204ENST00000398519 DNAAF4Q8WXU2 420 aa22.12■■□□□ 1.13
CSNK1D-204ENST00000398519 PPP1R1BQ9UD71 204 aaPredicted RBP22.12■■□□□ 1.13
CSNK1D-204ENST00000398519 NLRP10Q86W26 655 aa22.12■■□□□ 1.13
CSNK1D-204ENST00000398519 NOB1Q9ULX3 412 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-204ENST00000398519 C10orf71Q711Q0 1435 aa22.11■■□□□ 1.13
CSNK1D-204ENST00000398519 FAM177BA6PVY3 158 aa22.11■■□□□ 1.13
CSNK1D-204ENST00000398519 PARP10Q53GL7 1025 aa22.11■■□□□ 1.13
CSNK1D-204ENST00000398519 SUSD4Q5VX71 490 aa22.11■■□□□ 1.13
CSNK1D-204ENST00000398519 NBPF5PQ86XG9 351 aaPredicted RBP22.11■■□□□ 1.13
CSNK1D-204ENST00000398519 KIF16BQ96L93 1317 aa22.11■■□□□ 1.13
CSNK1D-204ENST00000398519 PRR5LQ6MZQ0 368 aa22.1■■□□□ 1.13
CSNK1D-204ENST00000398519 IBTKQ9P2D0 1353 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-204ENST00000398519 KIF13BQ9NQT8 1826 aa22.1■■□□□ 1.13
CSNK1D-204ENST00000398519 IGKV5-2P06315 115 aa22.09■■□□□ 1.13
CSNK1D-204ENST00000398519 TRIM28Q13263 835 aaKnown RBP22.09■■□□□ 1.13
CSNK1D-204ENST00000398519 CNBD1Q8NA66 436 aa22.09■■□□□ 1.13
CSNK1D-204ENST00000398519 NTSR2O95665 410 aa22.08■■□□□ 1.13
CSNK1D-204ENST00000398519 NEXNQ0ZGT2 675 aa22.08■■□□□ 1.13
CSNK1D-204ENST00000398519 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
CSNK1D-204ENST00000398519 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.12
CSNK1D-204ENST00000398519 PPP1R42Q7Z4L9 355 aa22.08■■□□□ 1.12
CSNK1D-204ENST00000398519 CCDC24Q8N4L8 307 aa22.08■■□□□ 1.12
CSNK1D-204ENST00000398519 FHDC1Q9C0D6 1143 aaPredicted RBP22.08■■□□□ 1.12
CSNK1D-204ENST00000398519 NYXQ9GZU5 481 aa22.08■■□□□ 1.12
CSNK1D-204ENST00000398519 CWF19L2Q2TBE0 894 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-204ENST00000398519 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
CSNK1D-204ENST00000398519 NEURL1BA8MQ27 555 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 NPHP1O15259 732 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 BEND3Q5T5X7 828 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 SLC4A10Q6U841 1118 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 NUTM1Q86Y26 1132 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 CCDC191Q8NCU4 936 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms