RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 HOXC9P31274 260 aa16.47■□□□□ 0.23
COL6A2-203ENST00000397763 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-203ENST00000397763 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
COL6A2-203ENST00000397763 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
COL6A2-203ENST00000397763 CCDC94Q9BW85 323 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-203ENST00000397763 UBE2HP62256 183 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 AIMP1Q12904 312 aaKnown RBP16.46■□□□□ 0.23
COL6A2-203ENST00000397763 ME3Q16798 604 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 HYPKQ9NX55 129 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 NDUFB9Q9Y6M9 179 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 SETD1AO15047 1707 aaKnown RBP16.46■□□□□ 0.23
COL6A2-203ENST00000397763 MON2Q7Z3U7 1717 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 ARHGEF10O15013 1369 aa16.46■□□□□ 0.23
COL6A2-203ENST00000397763 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
COL6A2-203ENST00000397763 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 KDM4AO75164 1064 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
COL6A2-203ENST00000397763 EDC3Q96F86 508 aaKnown RBP16.45■□□□□ 0.22
COL6A2-203ENST00000397763 CHGBP05060 677 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
COL6A2-203ENST00000397763 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
COL6A2-203ENST00000397763 SBNO1A3KN83 1393 aa16.45■□□□□ 0.22
COL6A2-203ENST00000397763 ITSN1Q15811 1721 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 AACSQ86V21 672 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 LUZP1Q86V48 1076 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 ZNF710Q8N1W2 664 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 LIG1P18858 919 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
COL6A2-203ENST00000397763 KCNF1Q9H3M0 494 aa16.43■□□□□ 0.22
COL6A2-203ENST00000397763 TLR7Q9NYK1 1049 aaKnown RBP16.43■□□□□ 0.22
COL6A2-203ENST00000397763 TPCN1Q9ULQ1 816 aa16.43■□□□□ 0.22
COL6A2-203ENST00000397763 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
COL6A2-203ENST00000397763 POLA2Q14181 598 aa16.43■□□□□ 0.22
COL6A2-203ENST00000397763 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
COL6A2-203ENST00000397763 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
COL6A2-203ENST00000397763 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
COL6A2-203ENST00000397763 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
COL6A2-203ENST00000397763 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
COL6A2-203ENST00000397763 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
COL6A2-203ENST00000397763 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.42■□□□□ 0.22
COL6A2-203ENST00000397763 TMEM2Q9UHN6 1383 aa16.42■□□□□ 0.22
COL6A2-203ENST00000397763 A0A087WWV3 80 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 PTGS1P23219 599 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 LRMPQ12912 555 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 RBM8AQ9Y5S9 174 aaKnown RBP16.41■□□□□ 0.22
COL6A2-203ENST00000397763 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 NRBP1Q9UHY1 535 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 NRKQ7Z2Y5 1582 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 KDRP35968 1356 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
COL6A2-203ENST00000397763 TNRQ92752 1358 aa16.4■□□□□ 0.22
COL6A2-203ENST00000397763 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
COL6A2-203ENST00000397763 EIF4A1P60842 406 aaKnown RBP16.4■□□□□ 0.22
COL6A2-203ENST00000397763 NMIQ13287 307 aaPredicted RBP16.4■□□□□ 0.22
COL6A2-203ENST00000397763 FBXW7Q969H0 707 aa16.4■□□□□ 0.22
COL6A2-203ENST00000397763 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
COL6A2-203ENST00000397763 ADAMTS13Q76LX8 1427 aa16.4■□□□□ 0.22
COL6A2-203ENST00000397763 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
COL6A2-203ENST00000397763 TEFQ10587 303 aa16.4■□□□□ 0.22
COL6A2-203ENST00000397763 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
COL6A2-203ENST00000397763 ZSCAN20P17040 1043 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-203ENST00000397763 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 ECHDC1Q9NTX5 307 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 SPATA31D1Q6ZQQ2 1576 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 CREB3L3Q68CJ9 461 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 TMEM87AQ8NBN3 555 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 FUCA2Q9BTY2 467 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 DACT1Q9NYF0 836 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
COL6A2-203ENST00000397763 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
COL6A2-203ENST00000397763 UVSSAQ2YD98 709 aa16.38■□□□□ 0.21
COL6A2-203ENST00000397763 SIRT1Q96EB6 747 aa16.38■□□□□ 0.21
COL6A2-203ENST00000397763 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
COL6A2-203ENST00000397763 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
COL6A2-203ENST00000397763 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-203ENST00000397763 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
COL6A2-203ENST00000397763 RIOK3O14730 519 aaKnown RBP16.37■□□□□ 0.21
COL6A2-203ENST00000397763 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL6A2-203ENST00000397763 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
COL6A2-203ENST00000397763 DMTNQ08495 405 aa16.37■□□□□ 0.21
COL6A2-203ENST00000397763 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms