RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 KCNJ4P48050 445 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 NUCB2P80303 420 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 GABPB1Q06547 395 aaPredicted RBP6.03□□□□□ -1.44
SSR1-202ENST00000397511 CWF19L2Q2TBE0 894 aaKnown RBP6.03□□□□□ -1.44
SSR1-202ENST00000397511 ZFP91Q96JP5 570 aaPredicted RBP6.03□□□□□ -1.44
SSR1-202ENST00000397511 SBNO1A3KN83 1393 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 IGSF1Q8N6C5 1336 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 CHMLP26374 656 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 ATP8B2P98198 1209 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 TEFQ10587 303 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.03□□□□□ -1.44
SSR1-202ENST00000397511 TSC1Q92574 1164 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 SIL1Q9H173 461 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 SOS1Q07889 1333 aaPredicted RBP6.03□□□□□ -1.44
SSR1-202ENST00000397511 SRCIN1Q9C0H9 1055 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 BTBD11A6QL63 1104 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 PROSER3Q2NL68 480 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 KLHDC4Q8TBB5 520 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 BCL2L12Q9HB09 334 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 OGFRQ9NZT2 677 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 AKAP12Q02952 1782 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 GADD45BO75293 160 aaPredicted RBP6.02□□□□□ -1.45
SSR1-202ENST00000397511 MYL6BP14649 208 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 CHAF1AQ13111 956 aaPredicted RBP6.02□□□□□ -1.45
SSR1-202ENST00000397511 SIRT1Q96EB6 747 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 TCEANC2Q96MN5 208 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 TIGD1Q96MW7 591 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 ORAI2Q96SN7 254 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
SSR1-202ENST00000397511 CHMP3Q9Y3E7 222 aa6.02□□□□□ -1.45
SSR1-202ENST00000397511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.02□□□□□ -1.451e-7■■■□□ 17.7
SSR1-202ENST00000397511 TECPR2O15040 1411 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 MCCP23508 829 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 ZC3H6P61129 1189 aaKnown RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 SLC39A6Q13433 755 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 ZNF530Q6P9A1 599 aaPredicted RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 LRSAM1Q6UWE0 723 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 THEMISQ8N1K5 641 aaPredicted RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 RHPN1Q8TCX5 695 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 PIBF1Q8WXW3 757 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 DIAPH3Q9NSV4 1193 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 NDUFB9Q9Y6M9 179 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 ARHGEF10O15013 1369 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 GOLGB1Q14789 3259 aaKnown RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 TTC21AQ8NDW8 1320 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 U2AF2P26368 475 aaKnown RBP eCLIP6.01□□□□□ -1.452e-7■■□□□ 13.1
SSR1-202ENST00000397511 NOLC1Q14978 699 aaKnown RBP eCLIP6.01□□□□□ -1.45
SSR1-202ENST00000397511 DDX17Q92841 729 aaKnown RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 TSPYL1Q9H0U9 437 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 PHF8Q9UPP1 1060 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 USP31Q70CQ4 1352 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 MAP3K5Q99683 1374 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 PLEKHG1Q9ULL1 1385 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 COL9A3Q14050 684 aaPredicted RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 RASEFQ8IZ41 740 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 MAP3K2Q9Y2U5 619 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.01□□□□□ -1.45
SSR1-202ENST00000397511 UBR1Q8IWV7 1749 aa6.01□□□□□ -1.45
SSR1-202ENST00000397511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6□□□□□ -1.45
SSR1-202ENST00000397511 NPM3O75607 178 aaKnown RBP6□□□□□ -1.45
SSR1-202ENST00000397511 CAPN15O75808 1086 aa6□□□□□ -1.45
SSR1-202ENST00000397511 CYP2E1P05181 493 aaPredicted RBP6□□□□□ -1.45
SSR1-202ENST00000397511 CHRM1P11229 460 aaPredicted RBP6□□□□□ -1.45
SSR1-202ENST00000397511 DNAAF4Q8WXU2 420 aa6□□□□□ -1.45
SSR1-202ENST00000397511 CCDC8Q9H0W5 538 aaPredicted RBP6□□□□□ -1.45
SSR1-202ENST00000397511 KIF24Q5T7B8 1368 aa6□□□□□ -1.45
SSR1-202ENST00000397511 KDRP35968 1356 aa6□□□□□ -1.45
SSR1-202ENST00000397511 FAM177BA6PVY3 158 aa6□□□□□ -1.45
SSR1-202ENST00000397511 PPFIA3O75145 1194 aa6□□□□□ -1.45
SSR1-202ENST00000397511 CASTP20810 708 aaKnown RBP6□□□□□ -1.45
SSR1-202ENST00000397511 EIF4A1P60842 406 aaKnown RBP6□□□□□ -1.45
SSR1-202ENST00000397511 OSBPL3Q9H4L5 887 aa6□□□□□ -1.45
SSR1-202ENST00000397511 CALCOCO1Q9P1Z2 691 aa6□□□□□ -1.45
SSR1-202ENST00000397511 TBX22Q9Y458 520 aa6□□□□□ -1.45
SSR1-202ENST00000397511 FIBPO43427 364 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 ADCK5Q3MIX3 580 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 RGS22Q8NE09 1264 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 ANKRD7Q92527 254 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 CWC22Q9HCG8 908 aaKnown RBP5.99□□□□□ -1.45
SSR1-202ENST00000397511 SSH2Q76I76 1423 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 SALL3Q9BXA9 1300 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 CHGBP05060 677 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 AK2P54819 239 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 C1orf141Q5JVX7 400 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 PRPF40BQ6NWY9 871 aaKnown RBP5.99□□□□□ -1.45
SSR1-202ENST00000397511 NECAB1Q8N987 351 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 EDC3Q96F86 508 aaKnown RBP5.99□□□□□ -1.45
SSR1-202ENST00000397511 CNPY2Q9Y2B0 182 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 AXIN2Q9Y2T1 843 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 LARGE1O95461 756 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 PTH1RQ03431 593 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 BEND3Q5T5X7 828 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 FAM173BQ6P4H8 233 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 USP48Q86UV5 1035 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 FERMT3Q86UX7 667 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 AACSQ86V21 672 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 CCDC83Q8IWF9 413 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 PI4K2BQ8TCG2 481 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms