RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 PI4K2BQ8TCG2 481 aa17.53■□□□□ 0.4
CCNF-202ENST00000397066 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
CCNF-202ENST00000397066 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.4
CCNF-202ENST00000397066 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
CCNF-202ENST00000397066 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
CCNF-202ENST00000397066 FAM173BQ6P4H8 233 aa17.52■□□□□ 0.4
CCNF-202ENST00000397066 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
CCNF-202ENST00000397066 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
CCNF-202ENST00000397066 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.39
CCNF-202ENST00000397066 PDCP20941 246 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 PSMA5P28066 241 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 PTH1RQ03431 593 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 HYPKQ9NX55 129 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 MTMR6Q9Y217 621 aa17.52■□□□□ 0.39
CCNF-202ENST00000397066 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 ZNF592Q92610 1267 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 SPATA32Q96LK8 384 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 TTC14Q96N46 770 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 ADCK5Q3MIX3 580 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 SIRT1Q96EB6 747 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 SBNO1A3KN83 1393 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCNF-202ENST00000397066 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 PYCARDQ9ULZ3 195 aa17.51■□□□□ 0.39
CCNF-202ENST00000397066 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 PTGS1P23219 599 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 H3BQV1 296 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
CCNF-202ENST00000397066 PA2G4Q9UQ80 394 aaKnown RBP17.5■□□□□ 0.39
CCNF-202ENST00000397066 BLOC1S2Q6QNY1 142 aa17.5■□□□□ 0.39
CCNF-202ENST00000397066 TTC21AQ8NDW8 1320 aa17.49■□□□□ 0.39
CCNF-202ENST00000397066 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
CCNF-202ENST00000397066 USP6P35125 1406 aa17.49■□□□□ 0.39
CCNF-202ENST00000397066 RIOK3O14730 519 aaKnown RBP17.49■□□□□ 0.39
CCNF-202ENST00000397066 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
CCNF-202ENST00000397066 MAP3K5Q99683 1374 aa17.49■□□□□ 0.39
CCNF-202ENST00000397066 ME3Q16798 604 aa17.49■□□□□ 0.39
CCNF-202ENST00000397066 C16orf45Q96MC5 204 aaPredicted RBP17.49■□□□□ 0.39
CCNF-202ENST00000397066 SIL1Q9H173 461 aa17.49■□□□□ 0.39
CCNF-202ENST00000397066 TYRO3Q06418 890 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 CCDC8Q9H0W5 538 aaPredicted RBP17.48■□□□□ 0.39
CCNF-202ENST00000397066 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 GOLGA6L19H0YKK7 550 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 ERC1Q8IUD2 1116 aa17.48■□□□□ 0.39
CCNF-202ENST00000397066 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
CCNF-202ENST00000397066 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
CCNF-202ENST00000397066 ANO6Q4KMQ2 910 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 FOSBP53539 338 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 TPD52L1Q16890 204 aaPredicted RBP17.47■□□□□ 0.39
CCNF-202ENST00000397066 POLA2Q14181 598 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 KIAA1524Q8TCG1 905 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 BOLA2Q9H3K6 86 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
CCNF-202ENST00000397066 CDC37L1Q7L3B6 337 aa17.46■□□□□ 0.39
CCNF-202ENST00000397066 SCAND2PQ9GZW5 306 aaPredicted RBP17.46■□□□□ 0.39
CCNF-202ENST00000397066 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
CCNF-202ENST00000397066 LIG1P18858 919 aa17.46■□□□□ 0.39
CCNF-202ENST00000397066 HOXC9P31274 260 aa17.46■□□□□ 0.39
CCNF-202ENST00000397066 HIP1O00291 1037 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 ANKRD1Q15327 319 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
CCNF-202ENST00000397066 ZSWIM6Q9HCJ5 1215 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 SPTLC3Q9NUV7 552 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
CCNF-202ENST00000397066 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
CCNF-202ENST00000397066 ZNF710Q8N1W2 664 aa17.44■□□□□ 0.38
CCNF-202ENST00000397066 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
CCNF-202ENST00000397066 BECN2A8MW95 431 aa17.44■□□□□ 0.38
CCNF-202ENST00000397066 FBXW7Q969H0 707 aa17.44■□□□□ 0.38
CCNF-202ENST00000397066 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 AP5Z1O43299 807 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 TNNT1P13805 278 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 ZNF165P49910 485 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 ZRSR1Q15695 479 aaKnown RBP17.43■□□□□ 0.38
CCNF-202ENST00000397066 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
CCNF-202ENST00000397066 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 DDX11Q96FC9 970 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 KCNF1Q9H3M0 494 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
CCNF-202ENST00000397066 TM6SF1Q9BZW5 370 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms