RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TMOD3Q9NYL9 352 aa19.68■□□□□ 0.74
SNX6-202ENST00000396526 EPB41L2O43491 1005 aaKnown RBP19.67■□□□□ 0.74
SNX6-202ENST00000396526 CHMLP26374 656 aa19.67■□□□□ 0.74
SNX6-202ENST00000396526 BICC1Q9H694 974 aaKnown RBP19.67■□□□□ 0.74
SNX6-202ENST00000396526 ANO2Q9NQ90 1003 aa19.67■□□□□ 0.74
SNX6-202ENST00000396526 CRYBG1Q9Y4K1 1723 aa19.67■□□□□ 0.74
SNX6-202ENST00000396526 IGKV5-2P06315 115 aa19.67■□□□□ 0.74
SNX6-202ENST00000396526 PKD1L3Q7Z443 1732 aa19.67■□□□□ 0.74
SNX6-202ENST00000396526 TEX13AQ9BXU3 409 aaPredicted RBP19.67■□□□□ 0.74
SNX6-202ENST00000396526 IL27Q8NEV9 243 aa19.66■□□□□ 0.74
SNX6-202ENST00000396526 BTG4Q9NY30 223 aa19.66■□□□□ 0.74
SNX6-202ENST00000396526 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
SNX6-202ENST00000396526 RUFY2Q8WXA3 655 aa19.66■□□□□ 0.74
SNX6-202ENST00000396526 ECHDC1Q9NTX5 307 aa19.66■□□□□ 0.74
SNX6-202ENST00000396526 PTCD1O75127 700 aaKnown RBP19.65■□□□□ 0.74
SNX6-202ENST00000396526 PARP4Q9UKK3 1724 aaKnown RBP19.65■□□□□ 0.74
SNX6-202ENST00000396526 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.73
SNX6-202ENST00000396526 A0A087WZG4 1122 aa19.64■□□□□ 0.73
SNX6-202ENST00000396526 ANAPC15P60006 121 aa19.64■□□□□ 0.73
SNX6-202ENST00000396526 GSE1Q14687 1217 aa19.64■□□□□ 0.73
SNX6-202ENST00000396526 MCM2P49736 904 aa19.63■□□□□ 0.73
SNX6-202ENST00000396526 AACSQ86V21 672 aa19.63■□□□□ 0.73
SNX6-202ENST00000396526 PA2G4Q9UQ80 394 aaKnown RBP19.63■□□□□ 0.73
SNX6-202ENST00000396526 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
SNX6-202ENST00000396526 USP42Q9H9J4 1324 aaKnown RBP19.62■□□□□ 0.73
SNX6-202ENST00000396526 DIAPH3Q9NSV4 1193 aa19.62■□□□□ 0.73
SNX6-202ENST00000396526 PI4K2BQ8TCG2 481 aa19.62■□□□□ 0.73
SNX6-202ENST00000396526 GBP4Q96PP9 640 aa19.62■□□□□ 0.73
SNX6-202ENST00000396526 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
SNX6-202ENST00000396526 ATP5J2-PTCD1G3V325 749 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 HIP1O00291 1037 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 LRP10Q7Z4F1 713 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 CWC25Q9NXE8 425 aaPredicted RBP19.6■□□□□ 0.73
SNX6-202ENST00000396526 STARD3NLO95772 234 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 DDX11L8A8MPP1 907 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 EXOC5O00471 708 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 PTMSP20962 102 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 KAZALD1Q96I82 304 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 SIL1Q9H173 461 aa19.6■□□□□ 0.73
SNX6-202ENST00000396526 MAP4K4O95819 1239 aaPredicted RBP19.59■□□□□ 0.73
SNX6-202ENST00000396526 MCM4P33991 863 aa19.59■□□□□ 0.73
SNX6-202ENST00000396526 EVI5LQ96CN4 794 aa19.59■□□□□ 0.73
SNX6-202ENST00000396526 UNC5CLQ8IV45 518 aa19.58■□□□□ 0.73
SNX6-202ENST00000396526 CWC22Q9HCG8 908 aaKnown RBP19.58■□□□□ 0.73
SNX6-202ENST00000396526 COPRSQ9NQ92 184 aa19.58■□□□□ 0.73
SNX6-202ENST00000396526 A1BGP04217 495 aa19.58■□□□□ 0.73
SNX6-202ENST00000396526 NEK4P51957 841 aa19.58■□□□□ 0.73
SNX6-202ENST00000396526 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.72
SNX6-202ENST00000396526 VSIG10Q8N0Z9 540 aa19.58■□□□□ 0.72
SNX6-202ENST00000396526 CCDC191Q8NCU4 936 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 GOLGA6L22H0YM25 854 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 NBPF14Q5TI25 921 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
SNX6-202ENST00000396526 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 CHMP3Q9Y3E7 222 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 NUCB2P80303 420 aa19.57■□□□□ 0.72
SNX6-202ENST00000396526 CDCA7Q9BWT1 371 aaPredicted RBP19.57■□□□□ 0.72
SNX6-202ENST00000396526 COL15A1P39059 1388 aa19.56■□□□□ 0.72
SNX6-202ENST00000396526 CD2BP2O95400 341 aaKnown RBP19.56■□□□□ 0.72
SNX6-202ENST00000396526 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
SNX6-202ENST00000396526 ZNF330Q9Y3S2 320 aaPredicted RBP19.56■□□□□ 0.72
SNX6-202ENST00000396526 SGSM2O43147 1006 aa19.55■□□□□ 0.72
SNX6-202ENST00000396526 SASH1O94885 1247 aa19.55■□□□□ 0.72
SNX6-202ENST00000396526 C5P01031 1676 aa19.55■□□□□ 0.72
SNX6-202ENST00000396526 RABL6Q3YEC7 729 aaPredicted RBP19.55■□□□□ 0.72
SNX6-202ENST00000396526 ARXQ96QS3 562 aa19.55■□□□□ 0.72
SNX6-202ENST00000396526 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
SNX6-202ENST00000396526 ZBTB3Q9H5J0 574 aa19.55■□□□□ 0.72
SNX6-202ENST00000396526 CWC27Q6UX04 472 aaKnown RBP19.54■□□□□ 0.72
SNX6-202ENST00000396526 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
SNX6-202ENST00000396526 EAF2Q96CJ1 260 aaPredicted RBP19.54■□□□□ 0.72
SNX6-202ENST00000396526 H7C1W4 665 aa19.53■□□□□ 0.72
SNX6-202ENST00000396526 EPHA10Q5JZY3 1008 aa19.53■□□□□ 0.72
SNX6-202ENST00000396526 LMBR1LQ6UX01 489 aa19.53■□□□□ 0.72
SNX6-202ENST00000396526 DDIT3P35638 169 aa19.53■□□□□ 0.72
SNX6-202ENST00000396526 JARID2Q92833 1246 aaPredicted RBP19.53■□□□□ 0.72
SNX6-202ENST00000396526 RAB3GAP1Q15042 981 aa19.52■□□□□ 0.72
SNX6-202ENST00000396526 PIGBQ92521 554 aa19.52■□□□□ 0.72
SNX6-202ENST00000396526 HSPA4P34932 840 aa19.51■□□□□ 0.71
SNX6-202ENST00000396526 PTPN12Q05209 780 aaKnown RBP19.51■□□□□ 0.71
SNX6-202ENST00000396526 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
SNX6-202ENST00000396526 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
SNX6-202ENST00000396526 RAD50Q92878 1312 aa19.51■□□□□ 0.71
SNX6-202ENST00000396526 KLHDC4Q8TBB5 520 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 TNPO1Q92973 898 aaKnown RBP19.5■□□□□ 0.71
SNX6-202ENST00000396526 ASAP1Q9ULH1 1129 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 KCNJ4P48050 445 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 HSP90AB3PQ58FF7 597 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 FSD1Q9BTV5 496 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 TCIRG1Q13488 830 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
SNX6-202ENST00000396526 BOLA2Q9H3K6 86 aa19.49■□□□□ 0.71
SNX6-202ENST00000396526 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
SNX6-202ENST00000396526 LAMB4A4D0S4 1761 aa19.49■□□□□ 0.71
SNX6-202ENST00000396526 SKOR2Q2VWA4 1001 aaPredicted RBP19.49■□□□□ 0.71
SNX6-202ENST00000396526 ZKSCAN1P17029 563 aaPredicted RBP19.48■□□□□ 0.71
SNX6-202ENST00000396526 TNNI3KQ59H18 835 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms