RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SKIP12755 728 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 CD33P20138 364 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 NEUROD4Q9HD90 331 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 ZDHHC3Q9NYG2 299 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 CARNS1A5YM72 827 aa7.37□□□□□ -1.23
GABPB1-204ENST00000396464 K7ELQ4 463 aaPredicted RBP7.37□□□□□ -1.23
GABPB1-204ENST00000396464 MAPTP10636 758 aaKnown RBP7.37□□□□□ -1.23
GABPB1-204ENST00000396464 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
GABPB1-204ENST00000396464 RBM47A0AV96 593 aaKnown RBP7.36□□□□□ -1.23
GABPB1-204ENST00000396464 ITGB2P05107 769 aa7.36□□□□□ -1.23
GABPB1-204ENST00000396464 COL8A1P27658 744 aa7.36□□□□□ -1.23
GABPB1-204ENST00000396464 GLMNQ92990 594 aa7.36□□□□□ -1.23
GABPB1-204ENST00000396464 SLC4A9Q96Q91 983 aa7.36□□□□□ -1.23
GABPB1-204ENST00000396464 TMEM229AB2RXF0 380 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 LZTS3O60299 673 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-204ENST00000396464 BAG6P46379 1132 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 TNP2Q05952 138 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-204ENST00000396464 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-204ENST00000396464 GTF2IP78347 998 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 MTFR1Q15390 333 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 FAM182BQ5T319 152 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 CHSY3Q70JA7 882 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 CWC22Q9HCG8 908 aaKnown RBP7.35□□□□□ -1.23
GABPB1-204ENST00000396464 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
GABPB1-204ENST00000396464 POM121CA8CG34 1229 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 PIK3CDO00329 1044 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 FAM157BP0CG42 384 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 ALAS2P22557 587 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 KIAA1522Q9P206 1035 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-204ENST00000396464 ZNF232Q9UNY5 417 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 PCDHGA11Q9Y5H2 935 aa7.34□□□□□ -1.23
GABPB1-204ENST00000396464 CANXP27824 592 aaKnown RBP7.33□□□□□ -1.24
GABPB1-204ENST00000396464 DGKGP49619 791 aa7.33□□□□□ -1.24
GABPB1-204ENST00000396464 PCBP4P57723 403 aaKnown RBP7.33□□□□□ -1.24
GABPB1-204ENST00000396464 IQSEC3Q9UPP2 1182 aaPredicted RBP7.33□□□□□ -1.24
GABPB1-204ENST00000396464 FURINP09958 794 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 NCOA4Q13772 614 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 ZNF468Q5VIY5 522 aaPredicted RBP7.32□□□□□ -1.24
GABPB1-204ENST00000396464 TRIM50Q86XT4 487 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.32□□□□□ -1.24
GABPB1-204ENST00000396464 NFATC2IPQ8NCF5 419 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 L3MBTL2Q969R5 705 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 MRRFQ96E11 262 aaKnown RBP7.32□□□□□ -1.24
GABPB1-204ENST00000396464 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
GABPB1-204ENST00000396464 CHMP3Q9Y3E7 222 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 USP3Q9Y6I4 520 aa7.32□□□□□ -1.24
GABPB1-204ENST00000396464 C1QTNF9BB2RNN3 333 aa7.31□□□□□ -1.24
GABPB1-204ENST00000396464 SMARCA5O60264 1052 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-204ENST00000396464 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
GABPB1-204ENST00000396464 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
GABPB1-204ENST00000396464 ZNF358Q9NW07 568 aa7.31□□□□□ -1.24
GABPB1-204ENST00000396464 SPDYE3A6NKU9 549 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-204ENST00000396464 RFX1P22670 979 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 NEUROD1Q13562 356 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 LRRC69Q6ZNQ3 347 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 FCHSD1Q86WN1 690 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 DEPDC4Q8N2C3 294 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 SPATA32Q96LK8 384 aa7.3□□□□□ -1.24
GABPB1-204ENST00000396464 USP17L5A8MUK1 530 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 NOS2P35228 1153 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 TXLNAP40222 546 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 TXNDC2Q86VQ3 553 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 SLC9A9Q8IVB4 645 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 ALG2Q9H553 416 aa7.29□□□□□ -1.24
GABPB1-204ENST00000396464 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
GABPB1-204ENST00000396464 SERTM1A2A2V5 107 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 SRPK2P78362 688 aaKnown RBP7.28□□□□□ -1.24
GABPB1-204ENST00000396464 TEAD4Q15561 434 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 SYT9Q86SS6 491 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 CD163Q86VB7 1156 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 KLF15Q9UIH9 416 aa7.28□□□□□ -1.24
GABPB1-204ENST00000396464 ELOA3CA0A087WX78 387 aaPredicted RBP7.27□□□□□ -1.24
GABPB1-204ENST00000396464 ELOA3DA6NLF2 546 aaPredicted RBP7.27□□□□□ -1.24
GABPB1-204ENST00000396464 ELOA3BQ3SY89 546 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 PRRT3Q5FWE3 981 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 TBCELQ5QJ74 424 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 CFAP70Q5T0N1 1121 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 FAM9AQ8IZU1 332 aaPredicted RBP7.27□□□□□ -1.24
GABPB1-204ENST00000396464 TNS4Q8IZW8 715 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 ELOA3Q8NG57 546 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 TPCN2Q8NHX9 752 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 RHPN1Q8TCX5 695 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 DRC1Q96MC2 740 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 VRTNQ9H8Y1 702 aa7.27□□□□□ -1.24
GABPB1-204ENST00000396464 GPC6Q9Y625 555 aaPredicted RBP7.27□□□□□ -1.24
GABPB1-204ENST00000396464 EFSO43281 561 aa7.27□□□□□ -1.25
GABPB1-204ENST00000396464 CHRNA4P43681 627 aa7.27□□□□□ -1.25
GABPB1-204ENST00000396464 ZDHHC1Q8WTX9 485 aa7.27□□□□□ -1.25
GABPB1-204ENST00000396464 UBE2Q2Q8WVN8 375 aa7.27□□□□□ -1.25
GABPB1-204ENST00000396464 STRN4Q9NRL3 753 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms