RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
PSMA1-201ENST00000396394 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
PSMA1-201ENST00000396394 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
PSMA1-201ENST00000396394 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
PSMA1-201ENST00000396394 CHL1O00533 1208 aa16.49■□□□□ 0.23
PSMA1-201ENST00000396394 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
PSMA1-201ENST00000396394 NRXN2Q9P2S2 1712 aa16.49■□□□□ 0.23
PSMA1-201ENST00000396394 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
PSMA1-201ENST00000396394 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
PSMA1-201ENST00000396394 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
PSMA1-201ENST00000396394 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
PSMA1-201ENST00000396394 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
PSMA1-201ENST00000396394 SCN7AQ01118 1682 aa16.48■□□□□ 0.23
PSMA1-201ENST00000396394 CHRNA5P30532 468 aa16.47■□□□□ 0.23
PSMA1-201ENST00000396394 DUSP27Q5VZP5 1158 aa16.47■□□□□ 0.23
PSMA1-201ENST00000396394 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
PSMA1-201ENST00000396394 ERVV-1B6SEH8 477 aa16.46■□□□□ 0.23
PSMA1-201ENST00000396394 SLFN5Q08AF3 891 aa16.46■□□□□ 0.23
PSMA1-201ENST00000396394 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
PSMA1-201ENST00000396394 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
PSMA1-201ENST00000396394 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
PSMA1-201ENST00000396394 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 H0YIN7 160 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 APAF1O14727 1248 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 PDE6BP35913 854 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 CFAP44Q96MT7 982 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 LAMB4A4D0S4 1761 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
PSMA1-201ENST00000396394 NPHP1O15259 732 aa16.44■□□□□ 0.22
PSMA1-201ENST00000396394 MYL6BP14649 208 aa16.44■□□□□ 0.22
PSMA1-201ENST00000396394 ST5P78524 1137 aa16.44■□□□□ 0.22
PSMA1-201ENST00000396394 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
PSMA1-201ENST00000396394 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
PSMA1-201ENST00000396394 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
PSMA1-201ENST00000396394 NIP7Q9Y221 180 aaKnown RBP eCLIP16.44■□□□□ 0.22
PSMA1-201ENST00000396394 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
PSMA1-201ENST00000396394 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
PSMA1-201ENST00000396394 BRCA1P38398 1863 aaKnown RBP16.43■□□□□ 0.22
PSMA1-201ENST00000396394 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
PSMA1-201ENST00000396394 HLFQ16534 295 aa16.43■□□□□ 0.22
PSMA1-201ENST00000396394 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
PSMA1-201ENST00000396394 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
PSMA1-201ENST00000396394 MAP3K15Q6ZN16 1313 aa16.43■□□□□ 0.22
PSMA1-201ENST00000396394 E9PSI1 815 aa16.42■□□□□ 0.22
PSMA1-201ENST00000396394 PDIA6Q15084 440 aa16.42■□□□□ 0.22
PSMA1-201ENST00000396394 TTLL6Q8N841 843 aa16.42■□□□□ 0.22
PSMA1-201ENST00000396394 ADCY9O60503 1353 aa16.41■□□□□ 0.22
PSMA1-201ENST00000396394 HOXB7P09629 217 aa16.41■□□□□ 0.22
PSMA1-201ENST00000396394 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
PSMA1-201ENST00000396394 ZNF853P0CG23 659 aa16.4■□□□□ 0.22
PSMA1-201ENST00000396394 TTLL7Q6ZT98 887 aa16.4■□□□□ 0.22
PSMA1-201ENST00000396394 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
PSMA1-201ENST00000396394 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
PSMA1-201ENST00000396394 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
PSMA1-201ENST00000396394 GNAI1P63096 354 aa16.4■□□□□ 0.22
PSMA1-201ENST00000396394 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
PSMA1-201ENST00000396394 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
PSMA1-201ENST00000396394 CCDC27Q2M243 656 aa16.39■□□□□ 0.21
PSMA1-201ENST00000396394 CCDC24Q8N4L8 307 aa16.39■□□□□ 0.21
PSMA1-201ENST00000396394 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
PSMA1-201ENST00000396394 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.21
PSMA1-201ENST00000396394 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
PSMA1-201ENST00000396394 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
PSMA1-201ENST00000396394 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
PSMA1-201ENST00000396394 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
PSMA1-201ENST00000396394 SRGNP10124 158 aa16.38■□□□□ 0.21
PSMA1-201ENST00000396394 KRT24Q2M2I5 525 aa16.38■□□□□ 0.21
PSMA1-201ENST00000396394 STYK1Q6J9G0 422 aa16.38■□□□□ 0.21
PSMA1-201ENST00000396394 CNKSR1Q969H4 720 aa16.38■□□□□ 0.21
PSMA1-201ENST00000396394 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
PSMA1-201ENST00000396394 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
PSMA1-201ENST00000396394 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
PSMA1-201ENST00000396394 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
PSMA1-201ENST00000396394 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
PSMA1-201ENST00000396394 DLEC1Q9Y238 1755 aa16.37■□□□□ 0.21
PSMA1-201ENST00000396394 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
PSMA1-201ENST00000396394 PROSER3Q2NL68 480 aa16.36■□□□□ 0.21
PSMA1-201ENST00000396394 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
PSMA1-201ENST00000396394 C9orf131Q5VYM1 1079 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 WDR63Q8IWG1 891 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
PSMA1-201ENST00000396394 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 ANXA1P04083 346 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 NPR1P16066 1061 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 PARP10Q53GL7 1025 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 CHMP4AQ9BY43 222 aa16.35■□□□□ 0.21
PSMA1-201ENST00000396394 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
PSMA1-201ENST00000396394 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
PSMA1-201ENST00000396394 PPP1R42Q7Z4L9 355 aa16.34■□□□□ 0.21
PSMA1-201ENST00000396394 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
PSMA1-201ENST00000396394 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
PSMA1-201ENST00000396394 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.2
PSMA1-201ENST00000396394 GPTP24298 496 aa16.33■□□□□ 0.2
PSMA1-201ENST00000396394 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
PSMA1-201ENST00000396394 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms