RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
NUP50-202ENST00000396096 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
NUP50-202ENST00000396096 METTL22Q9BUU2 404 aaPredicted RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 ANO2Q9NQ90 1003 aa20.45■□□□□ 0.86
NUP50-202ENST00000396096 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
NUP50-202ENST00000396096 AIMP1Q12904 312 aaKnown RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 L1TD1Q5T7N2 865 aaKnown RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
NUP50-202ENST00000396096 NEURL1BA8MQ27 555 aa20.44■□□□□ 0.86
NUP50-202ENST00000396096 SSFA2P28290 1259 aa20.44■□□□□ 0.86
NUP50-202ENST00000396096 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
NUP50-202ENST00000396096 SKOR2Q2VWA4 1001 aaPredicted RBP20.44■□□□□ 0.86
NUP50-202ENST00000396096 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
NUP50-202ENST00000396096 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
NUP50-202ENST00000396096 FSD2A1L4K1 749 aa20.43■□□□□ 0.86
NUP50-202ENST00000396096 SGSM2O43147 1006 aa20.43■□□□□ 0.86
NUP50-202ENST00000396096 BICC1Q9H694 974 aaKnown RBP20.43■□□□□ 0.86
NUP50-202ENST00000396096 PALD1Q9ULE6 856 aa20.43■□□□□ 0.86
NUP50-202ENST00000396096 COL15A1P39059 1388 aa20.43■□□□□ 0.86
NUP50-202ENST00000396096 COPS6Q7L5N1 327 aa20.43■□□□□ 0.86
NUP50-202ENST00000396096 AFDNP55196 1824 aaKnown RBP20.42■□□□□ 0.86
NUP50-202ENST00000396096 MYL6BP14649 208 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 HSPA4P34932 840 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 NEK4P51957 841 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 CABP4P57796 275 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 GCKRQ14397 625 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 IL25Q9H293 177 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 ECHDC1Q9NTX5 307 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 USP16Q9Y5T5 823 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 COL5A2P05997 1499 aaPredicted RBP20.42■□□□□ 0.86
NUP50-202ENST00000396096 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
NUP50-202ENST00000396096 GPATCH3Q96I76 525 aa20.41■□□□□ 0.86
NUP50-202ENST00000396096 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
NUP50-202ENST00000396096 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
NUP50-202ENST00000396096 RAD50Q92878 1312 aa20.41■□□□□ 0.86
NUP50-202ENST00000396096 PCDH11XQ9BZA7 1347 aa20.41■□□□□ 0.86
NUP50-202ENST00000396096 PCDH11YQ9BZA8 1340 aa20.41■□□□□ 0.86
NUP50-202ENST00000396096 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
NUP50-202ENST00000396096 PRDM11Q9NQV5 511 aa20.4■□□□□ 0.86
NUP50-202ENST00000396096 SHANK3Q9BYB0 1731 aa20.4■□□□□ 0.86
NUP50-202ENST00000396096 BAG4O95429 457 aaKnown RBP20.39■□□□□ 0.86
NUP50-202ENST00000396096 MAP4K4O95819 1239 aaPredicted RBP20.39■□□□□ 0.86
NUP50-202ENST00000396096 CUL4AQ13619 759 aa20.39■□□□□ 0.86
NUP50-202ENST00000396096 MYD88Q99836 296 aa20.39■□□□□ 0.86
NUP50-202ENST00000396096 SLAIN2Q9P270 581 aa20.39■□□□□ 0.86
NUP50-202ENST00000396096 BRPF3Q9ULD4 1205 aa20.39■□□□□ 0.86
NUP50-202ENST00000396096 SASH1O94885 1247 aa20.39■□□□□ 0.85
NUP50-202ENST00000396096 IFIT2P09913 472 aaKnown RBP20.39■□□□□ 0.85
NUP50-202ENST00000396096 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.85
NUP50-202ENST00000396096 TMX3Q96JJ7 454 aa20.39■□□□□ 0.85
NUP50-202ENST00000396096 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.85
NUP50-202ENST00000396096 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
NUP50-202ENST00000396096 KDM4FA0A1W2PPD8 638 aa20.38■□□□□ 0.85
NUP50-202ENST00000396096 ERVV-2B6SEH9 535 aa20.38■□□□□ 0.85
NUP50-202ENST00000396096 GOLGA6L22H0YM25 854 aa20.38■□□□□ 0.85
NUP50-202ENST00000396096 NKX1-1Q15270 411 aaPredicted RBP20.38■□□□□ 0.85
NUP50-202ENST00000396096 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
NUP50-202ENST00000396096 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
NUP50-202ENST00000396096 GOLGA6L3A6NEY3 463 aa20.37■□□□□ 0.85
NUP50-202ENST00000396096 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
NUP50-202ENST00000396096 AACSQ86V21 672 aa20.37■□□□□ 0.85
NUP50-202ENST00000396096 INTS4Q96HW7 963 aaKnown RBP20.37■□□□□ 0.85
NUP50-202ENST00000396096 TOM1L2Q6ZVM7 507 aa20.36■□□□□ 0.85
NUP50-202ENST00000396096 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
NUP50-202ENST00000396096 EVI5LQ96CN4 794 aa20.36■□□□□ 0.85
NUP50-202ENST00000396096 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
NUP50-202ENST00000396096 GZF1Q9H116 711 aaPredicted RBP20.36■□□□□ 0.85
NUP50-202ENST00000396096 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
NUP50-202ENST00000396096 NUP188Q5SRE5 1749 aa20.36■□□□□ 0.85
NUP50-202ENST00000396096 PLBD2Q8NHP8 589 aa20.35■□□□□ 0.85
NUP50-202ENST00000396096 RABL6Q3YEC7 729 aaPredicted RBP20.35■□□□□ 0.85
NUP50-202ENST00000396096 EPHA10Q5JZY3 1008 aa20.35■□□□□ 0.85
NUP50-202ENST00000396096 EAF2Q96CJ1 260 aaPredicted RBP20.35■□□□□ 0.85
NUP50-202ENST00000396096 COPRSQ9NQ92 184 aa20.35■□□□□ 0.85
NUP50-202ENST00000396096 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
NUP50-202ENST00000396096 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.85
NUP50-202ENST00000396096 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
NUP50-202ENST00000396096 ZNF335Q9H4Z2 1342 aaPredicted RBP20.33■□□□□ 0.85
NUP50-202ENST00000396096 TNS2Q63HR2 1409 aa20.33■□□□□ 0.84
NUP50-202ENST00000396096 IL2RBP14784 551 aa20.33■□□□□ 0.84
NUP50-202ENST00000396096 RFX5P48382 616 aaPredicted RBP20.33■□□□□ 0.84
NUP50-202ENST00000396096 PKP1Q13835 747 aa20.33■□□□□ 0.84
NUP50-202ENST00000396096 SNX14Q9Y5W7 946 aa20.33■□□□□ 0.84
NUP50-202ENST00000396096 HIP1O00291 1037 aa20.32■□□□□ 0.84
NUP50-202ENST00000396096 CWC27Q6UX04 472 aaKnown RBP20.32■□□□□ 0.84
NUP50-202ENST00000396096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.32■□□□□ 0.84
NUP50-202ENST00000396096 CASP7P55210 303 aa20.31■□□□□ 0.84
NUP50-202ENST00000396096 KLHL40Q2TBA0 621 aa20.31■□□□□ 0.84
NUP50-202ENST00000396096 KCNB2Q92953 911 aa20.31■□□□□ 0.84
NUP50-202ENST00000396096 SNRKQ9NRH2 765 aa20.31■□□□□ 0.84
NUP50-202ENST00000396096 NBPF26B4DH59 902 aa20.3■□□□□ 0.84
NUP50-202ENST00000396096 NBPF14Q5TI25 921 aa20.3■□□□□ 0.84
NUP50-202ENST00000396096 NBPF10Q6P3W6 841 aaKnown RBP20.3■□□□□ 0.84
NUP50-202ENST00000396096 NBPF15Q8N660 670 aa20.3■□□□□ 0.84
NUP50-202ENST00000396096 XRCC6P12956 609 aaKnown RBP eCLIP20.3■□□□□ 0.84
NUP50-202ENST00000396096 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
NUP50-202ENST00000396096 MRE11P49959 708 aa20.3■□□□□ 0.84
NUP50-202ENST00000396096 TTC14Q96N46 770 aa20.3■□□□□ 0.84
NUP50-202ENST00000396096 UPF3BQ9BZI7 483 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms