RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
SCAF11-203ENST00000395453 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
SCAF11-203ENST00000395453 MKRN1Q9UHC7 482 aaKnown RBP18.03■□□□□ 0.48
SCAF11-203ENST00000395453 BTBD11A6QL63 1104 aa18.02■□□□□ 0.48
SCAF11-203ENST00000395453 KCNQ3O43525 872 aa18.02■□□□□ 0.48
SCAF11-203ENST00000395453 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.48
SCAF11-203ENST00000395453 ERFEQ4G0M1 354 aa18.02■□□□□ 0.48
SCAF11-203ENST00000395453 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
SCAF11-203ENST00000395453 PRDM10Q9NQV6 1147 aa18.01■□□□□ 0.47
SCAF11-203ENST00000395453 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
SCAF11-203ENST00000395453 MCM10Q7L590 875 aa18■□□□□ 0.47
SCAF11-203ENST00000395453 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
SCAF11-203ENST00000395453 A0A087WZG4 1122 aa17.99■□□□□ 0.47
SCAF11-203ENST00000395453 FOXN1O15353 648 aa17.99■□□□□ 0.47
SCAF11-203ENST00000395453 ZNF622Q969S3 477 aaKnown RBP eCLIP17.99■□□□□ 0.472e-9■□□□□ 9
SCAF11-203ENST00000395453 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
SCAF11-203ENST00000395453 C21orf2O43822 256 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 IL6STP40189 918 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-203ENST00000395453 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 CNTNAP1P78357 1384 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 A1BGP04217 495 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 PDE6BP35913 854 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 CTCFP49711 727 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-203ENST00000395453 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
SCAF11-203ENST00000395453 LTBP3Q9NS15 1303 aa17.97■□□□□ 0.47
SCAF11-203ENST00000395453 BRIP1Q9BX63 1249 aa17.97■□□□□ 0.47
SCAF11-203ENST00000395453 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
SCAF11-203ENST00000395453 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
SCAF11-203ENST00000395453 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.46
SCAF11-203ENST00000395453 POTEIP0CG38 1075 aa17.96■□□□□ 0.46
SCAF11-203ENST00000395453 POTEJP0CG39 1038 aa17.96■□□□□ 0.46
SCAF11-203ENST00000395453 RALBP1Q15311 655 aa17.96■□□□□ 0.46
SCAF11-203ENST00000395453 TAF7Q15545 349 aaPredicted RBP17.96■□□□□ 0.46
SCAF11-203ENST00000395453 TAOK3Q9H2K8 898 aa17.96■□□□□ 0.46
SCAF11-203ENST00000395453 DLG5Q8TDM6 1919 aa17.95■□□□□ 0.46
SCAF11-203ENST00000395453 IQCA1LA6NCM1 817 aa17.95■□□□□ 0.46
SCAF11-203ENST00000395453 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
SCAF11-203ENST00000395453 LDHDQ86WU2 507 aa17.95■□□□□ 0.46
SCAF11-203ENST00000395453 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
SCAF11-203ENST00000395453 FER1L6Q2WGJ9 1857 aa17.94■□□□□ 0.46
SCAF11-203ENST00000395453 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
SCAF11-203ENST00000395453 SLC34A2O95436 690 aa17.94■□□□□ 0.46
SCAF11-203ENST00000395453 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
SCAF11-203ENST00000395453 PASKQ96RG2 1323 aa17.94■□□□□ 0.46
SCAF11-203ENST00000395453 CAMTA2O94983 1202 aa17.93■□□□□ 0.46
SCAF11-203ENST00000395453 NEFMP07197 916 aa17.93■□□□□ 0.46
SCAF11-203ENST00000395453 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
SCAF11-203ENST00000395453 SOGA3Q5TF21 947 aa17.93■□□□□ 0.46
SCAF11-203ENST00000395453 CNKSR1Q969H4 720 aa17.93■□□□□ 0.46
SCAF11-203ENST00000395453 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
SCAF11-203ENST00000395453 SCN7AQ01118 1682 aa17.92■□□□□ 0.46
SCAF11-203ENST00000395453 TMEM88BA6NKF7 163 aa17.92■□□□□ 0.46
SCAF11-203ENST00000395453 VEGFBP49765 207 aa17.92■□□□□ 0.46
SCAF11-203ENST00000395453 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
SCAF11-203ENST00000395453 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
SCAF11-203ENST00000395453 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
SCAF11-203ENST00000395453 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
SCAF11-203ENST00000395453 ANKRD31Q8N7Z5 1873 aa17.9■□□□□ 0.46
SCAF11-203ENST00000395453 NPHP1O15259 732 aa17.9■□□□□ 0.46
SCAF11-203ENST00000395453 LBX1P52954 281 aa17.9■□□□□ 0.46
SCAF11-203ENST00000395453 STYK1Q6J9G0 422 aa17.9■□□□□ 0.46
SCAF11-203ENST00000395453 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
SCAF11-203ENST00000395453 REM2Q8IYK8 340 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-203ENST00000395453 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
SCAF11-203ENST00000395453 L3MBTL3Q96JM7 780 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-203ENST00000395453 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-203ENST00000395453 WBP1LQ9NX94 342 aa17.9■□□□□ 0.46
SCAF11-203ENST00000395453 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
SCAF11-203ENST00000395453 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
SCAF11-203ENST00000395453 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
SCAF11-203ENST00000395453 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
SCAF11-203ENST00000395453 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
SCAF11-203ENST00000395453 DZIP3Q86Y13 1208 aaKnown RBP17.89■□□□□ 0.45
SCAF11-203ENST00000395453 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
SCAF11-203ENST00000395453 PNISRQ8TF01 805 aaKnown RBP17.89■□□□□ 0.45
SCAF11-203ENST00000395453 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
SCAF11-203ENST00000395453 ITGBL1O95965 494 aaPredicted RBP17.88■□□□□ 0.45
SCAF11-203ENST00000395453 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
SCAF11-203ENST00000395453 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
SCAF11-203ENST00000395453 SETDB2Q96T68 719 aa17.88■□□□□ 0.45
SCAF11-203ENST00000395453 KDM3BQ7LBC6 1761 aa17.87■□□□□ 0.45
SCAF11-203ENST00000395453 RGL2O15211 777 aa17.87■□□□□ 0.45
SCAF11-203ENST00000395453 SRGNP10124 158 aa17.87■□□□□ 0.45
SCAF11-203ENST00000395453 ST5P78524 1137 aa17.87■□□□□ 0.45
SCAF11-203ENST00000395453 MASTLQ96GX5 879 aa17.87■□□□□ 0.45
SCAF11-203ENST00000395453 SCN4AP35499 1836 aa17.87■□□□□ 0.45
SCAF11-203ENST00000395453 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
SCAF11-203ENST00000395453 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
SCAF11-203ENST00000395453 ZBTB22O15209 634 aa17.86■□□□□ 0.45
SCAF11-203ENST00000395453 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
SCAF11-203ENST00000395453 EAPPQ56P03 285 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-203ENST00000395453 THUMPD2Q9BTF0 503 aaKnown RBP17.86■□□□□ 0.45
SCAF11-203ENST00000395453 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
SCAF11-203ENST00000395453 MYBBP1AQ9BQG0 1328 aaKnown RBP17.85■□□□□ 0.45
SCAF11-203ENST00000395453 MAP2K1Q02750 393 aaPredicted RBP17.85■□□□□ 0.45
SCAF11-203ENST00000395453 ABHD8Q96I13 439 aa17.85■□□□□ 0.45
SCAF11-203ENST00000395453 HACL1Q9UJ83 578 aa17.85■□□□□ 0.45
SCAF11-203ENST00000395453 CLEC11AQ9Y240 323 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms