RNA–Protein interactions for RNA: ENST00000395418.7

IFT20-203, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene IFT20, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-203ENST00000395418 FOXN1O15353 648 aa20.63■□□□□ 0.89
IFT20-203ENST00000395418 CAMTA2O94983 1202 aa20.63■□□□□ 0.89
IFT20-203ENST00000395418 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
IFT20-203ENST00000395418 MASTLQ96GX5 879 aa20.63■□□□□ 0.89
IFT20-203ENST00000395418 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
IFT20-203ENST00000395418 SOGA3Q5TF21 947 aa20.62■□□□□ 0.89
IFT20-203ENST00000395418 CNTNAP1P78357 1384 aa20.61■□□□□ 0.89
IFT20-203ENST00000395418 IQCA1LA6NCM1 817 aa20.61■□□□□ 0.89
IFT20-203ENST00000395418 U2SURPO15042 1029 aaKnown RBP20.61■□□□□ 0.89
IFT20-203ENST00000395418 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
IFT20-203ENST00000395418 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
IFT20-203ENST00000395418 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
IFT20-203ENST00000395418 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
IFT20-203ENST00000395418 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
IFT20-203ENST00000395418 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
IFT20-203ENST00000395418 KCNQ3O43525 872 aa20.59■□□□□ 0.89
IFT20-203ENST00000395418 PIP4K2AP48426 406 aaPredicted RBP20.59■□□□□ 0.89
IFT20-203ENST00000395418 TAF1DQ9H5J8 278 aaPredicted RBP20.59■□□□□ 0.89
IFT20-203ENST00000395418 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
IFT20-203ENST00000395418 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
IFT20-203ENST00000395418 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 TMEM88BA6NKF7 163 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 BTBD11A6QL63 1104 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 VEGFBP49765 207 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
IFT20-203ENST00000395418 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 EAPPQ56P03 285 aaPredicted RBP20.57■□□□□ 0.88
IFT20-203ENST00000395418 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
IFT20-203ENST00000395418 C7orf43Q8WVR3 580 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 USP16Q9Y5T5 823 aa20.57■□□□□ 0.88
IFT20-203ENST00000395418 ITGBL1O95965 494 aaPredicted RBP20.56■□□□□ 0.88
IFT20-203ENST00000395418 AIDAQ96BJ3 306 aa20.56■□□□□ 0.88
IFT20-203ENST00000395418 CLEC11AQ9Y240 323 aa20.56■□□□□ 0.88
IFT20-203ENST00000395418 NPR1P16066 1061 aa20.55■□□□□ 0.88
IFT20-203ENST00000395418 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
IFT20-203ENST00000395418 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
IFT20-203ENST00000395418 CEMIPQ8WUJ3 1361 aa20.55■□□□□ 0.88
IFT20-203ENST00000395418 ZNF541Q9H0D2 1346 aa20.54■□□□□ 0.88
IFT20-203ENST00000395418 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
IFT20-203ENST00000395418 CTCFP49711 727 aaPredicted RBP20.54■□□□□ 0.88
IFT20-203ENST00000395418 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
IFT20-203ENST00000395418 CLEC4GQ6UXB4 293 aa20.54■□□□□ 0.88
IFT20-203ENST00000395418 HACL1Q9UJ83 578 aa20.54■□□□□ 0.88
IFT20-203ENST00000395418 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
IFT20-203ENST00000395418 NUP98P52948 1817 aa20.53■□□□□ 0.88
IFT20-203ENST00000395418 EPHX2P34913 555 aa20.52■□□□□ 0.88
IFT20-203ENST00000395418 TPTE2Q6XPS3 522 aa20.52■□□□□ 0.88
IFT20-203ENST00000395418 PHACTR3Q96KR7 559 aa20.52■□□□□ 0.88
IFT20-203ENST00000395418 KLRG2A4D1S0 409 aaPredicted RBP20.51■□□□□ 0.87
IFT20-203ENST00000395418 FAM177BA6PVY3 158 aa20.51■□□□□ 0.87
IFT20-203ENST00000395418 LBX1P52954 281 aa20.51■□□□□ 0.87
IFT20-203ENST00000395418 WBP1LQ9NX94 342 aa20.51■□□□□ 0.87
IFT20-203ENST00000395418 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
IFT20-203ENST00000395418 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
IFT20-203ENST00000395418 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
IFT20-203ENST00000395418 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
IFT20-203ENST00000395418 TRPM7Q96QT4 1865 aa20.5■□□□□ 0.87
IFT20-203ENST00000395418 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
IFT20-203ENST00000395418 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
IFT20-203ENST00000395418 MAP1SQ66K74 1059 aaPredicted RBP20.49■□□□□ 0.87
IFT20-203ENST00000395418 PNMA8AQ86V59 439 aaPredicted RBP20.49■□□□□ 0.87
IFT20-203ENST00000395418 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
IFT20-203ENST00000395418 ALDH1B1P30837 517 aa20.48■□□□□ 0.87
IFT20-203ENST00000395418 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
IFT20-203ENST00000395418 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
IFT20-203ENST00000395418 LAMB4A4D0S4 1761 aa20.47■□□□□ 0.87
IFT20-203ENST00000395418 RASSF10A6NK89 507 aa20.47■□□□□ 0.87
IFT20-203ENST00000395418 FZD9O00144 591 aa20.47■□□□□ 0.87
IFT20-203ENST00000395418 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
IFT20-203ENST00000395418 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
IFT20-203ENST00000395418 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
IFT20-203ENST00000395418 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
IFT20-203ENST00000395418 MCM10Q7L590 875 aa20.46■□□□□ 0.87
IFT20-203ENST00000395418 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
IFT20-203ENST00000395418 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
IFT20-203ENST00000395418 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
IFT20-203ENST00000395418 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
IFT20-203ENST00000395418 HLFQ16534 295 aa20.45■□□□□ 0.86
IFT20-203ENST00000395418 GPC2Q8N158 579 aa20.45■□□□□ 0.86
IFT20-203ENST00000395418 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
IFT20-203ENST00000395418 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
IFT20-203ENST00000395418 DLG5Q8TDM6 1919 aa20.45■□□□□ 0.86
IFT20-203ENST00000395418 HSPA8P11142 646 aaKnown RBP20.44■□□□□ 0.86
IFT20-203ENST00000395418 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
IFT20-203ENST00000395418 ABT1Q9ULW3 272 aaKnown RBP20.44■□□□□ 0.86
IFT20-203ENST00000395418 RGL2O15211 777 aa20.43■□□□□ 0.86
IFT20-203ENST00000395418 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
IFT20-203ENST00000395418 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
IFT20-203ENST00000395418 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
IFT20-203ENST00000395418 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
IFT20-203ENST00000395418 PSMD1Q99460 953 aa20.42■□□□□ 0.86
IFT20-203ENST00000395418 COL4A5P29400 1685 aa20.42■□□□□ 0.86
IFT20-203ENST00000395418 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
IFT20-203ENST00000395418 ABHD8Q96I13 439 aa20.41■□□□□ 0.86
IFT20-203ENST00000395418 DDX21Q9NR30 783 aaKnown RBP eCLIP20.41■□□□□ 0.86
IFT20-203ENST00000395418 SNED1Q8TER0 1413 aa20.41■□□□□ 0.86
IFT20-203ENST00000395418 FMR1Q06787 632 aaKnown RBP eCLIP20.4■□□□□ 0.86
IFT20-203ENST00000395418 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
IFT20-203ENST00000395418 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms