RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 CRY2Q49AN0 593 aa8.35□□□□□ -1.07
SMARCAD1-203ENST00000394961 CC2D2BQ6DHV5 1058 aa8.35□□□□□ -1.07
SMARCAD1-203ENST00000394961 C2CD5Q86YS7 1000 aa8.35□□□□□ -1.07
SMARCAD1-203ENST00000394961 MASTLQ96GX5 879 aa8.35□□□□□ -1.07
SMARCAD1-203ENST00000394961 SRGNP10124 158 aa8.35□□□□□ -1.07
SMARCAD1-203ENST00000394961 TBC1D9BQ66K14 1250 aa8.35□□□□□ -1.07
SMARCAD1-203ENST00000394961 POTECB2RU33 542 aa8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 HMOX1P09601 288 aa8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 NPR1P16066 1061 aa8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 ST5P78524 1137 aa8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 PASKQ96RG2 1323 aa8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 A0A1B0GUL6 1792 aa8.34□□□□□ -1.07
SMARCAD1-203ENST00000394961 SLC39A6Q13433 755 aa8.34□□□□□ -1.08
SMARCAD1-203ENST00000394961 PSMD1Q99460 953 aa8.34□□□□□ -1.08
SMARCAD1-203ENST00000394961 RNF181Q9P0P0 153 aa8.34□□□□□ -1.08
SMARCAD1-203ENST00000394961 MYH3P11055 1940 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 VEGFAP15692 232 aaPredicted RBP8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 CHRNA5P30532 468 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 TAF7Q15545 349 aaPredicted RBP8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 PCGF6Q9BYE7 350 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 NMRK2Q9NPI5 230 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 PRKAR2BP31323 418 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 NCBP3Q53F19 620 aaKnown RBP8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
SMARCAD1-203ENST00000394961 NYXQ9GZU5 481 aa8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 CDHR2Q9BYE9 1310 aa8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 SLC10A5Q5PT55 438 aa8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 LRP10Q7Z4F1 713 aa8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 RTKN2Q8IZC4 609 aa8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 SETDB2Q96T68 719 aa8.32□□□□□ -1.08
SMARCAD1-203ENST00000394961 C16orf71Q8IYS4 520 aaPredicted RBP8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 TAF1P21675 1872 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 HOXB7P09629 217 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 CCDC93Q567U6 631 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 FZD9O00144 591 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 RALBP1Q15311 655 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 NFE2L2Q16236 605 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 CRAMP1Q96RY5 1269 aa8.31□□□□□ -1.08
SMARCAD1-203ENST00000394961 COL4A5P29400 1685 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 MAP3K15Q6ZN16 1313 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 NBPF26B4DH59 902 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 NBPF10Q6P3W6 841 aaKnown RBP8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 RTFDC1Q9BY42 306 aaPredicted RBP8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 TAOK3Q9H2K8 898 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 IQCA1LA6NCM1 817 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 EIF4A1P60842 406 aaKnown RBP8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 RASSF7Q02833 373 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 ZNF34Q8IZ26 560 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 LDHDQ86WU2 507 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 RRAGCQ9HB90 399 aa8.3□□□□□ -1.08
SMARCAD1-203ENST00000394961 CNTNAP1P78357 1384 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 ARAP2Q8WZ64 1704 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 CANXP27824 592 aaKnown RBP8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 PARP10Q53GL7 1025 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 PRPF40BQ6NWY9 871 aaKnown RBP8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 TPTE2Q6XPS3 522 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 RTF1Q92541 710 aaKnown RBP8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 POLR3GLQ9BT43 218 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 SRCAPQ6ZRS2 3230 aa8.29□□□□□ -1.08
SMARCAD1-203ENST00000394961 USP16Q9Y5T5 823 aa8.28□□□□□ -1.08
SMARCAD1-203ENST00000394961 A1BGP04217 495 aa8.28□□□□□ -1.08
SMARCAD1-203ENST00000394961 LMOD3Q0VAK6 560 aa8.28□□□□□ -1.08
SMARCAD1-203ENST00000394961 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
SMARCAD1-203ENST00000394961 KCNQ3O43525 872 aa8.27□□□□□ -1.09
SMARCAD1-203ENST00000394961 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
SMARCAD1-203ENST00000394961 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
SMARCAD1-203ENST00000394961 PRDM10Q9NQV6 1147 aa8.27□□□□□ -1.09
SMARCAD1-203ENST00000394961 PGAP2Q9UHJ9 254 aa8.27□□□□□ -1.09
SMARCAD1-203ENST00000394961 NTSR2O95665 410 aa8.26□□□□□ -1.09
SMARCAD1-203ENST00000394961 GIGYF2Q6Y7W6 1299 aaKnown RBP8.26□□□□□ -1.09
SMARCAD1-203ENST00000394961 GPC2Q8N158 579 aa8.26□□□□□ -1.09
SMARCAD1-203ENST00000394961 PNMA8AQ86V59 439 aaPredicted RBP8.26□□□□□ -1.09
SMARCAD1-203ENST00000394961 COL4A1P02462 1669 aa8.26□□□□□ -1.09
SMARCAD1-203ENST00000394961 HSP90AB3PQ58FF7 597 aa8.26□□□□□ -1.09
SMARCAD1-203ENST00000394961 RASSF10A6NK89 507 aa8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 IARSP41252 1262 aaKnown RBP8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 PDIA6Q15084 440 aa8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 NBPF5PQ86XG9 351 aaPredicted RBP8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 TAF1DQ9H5J8 278 aaPredicted RBP8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 U2AF1L5P0DN76 240 aaPredicted RBP8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 U2AF1Q01081 240 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 ITGBL1O95965 494 aaPredicted RBP8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 ERFEQ4G0M1 354 aa8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 SUPT20HQ8NEM7 779 aa8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 NECTIN2Q92692 538 aa8.25□□□□□ -1.09
SMARCAD1-203ENST00000394961 ZNF526Q8TF50 670 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms